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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0460100 |
| Transcript ID | LotjaGi3g1v0460100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Equilibrative nucleoside transporter; TAIR: AT4G05120.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3; TrEMBL-Plants: tr|V7AIC6|V7AIC6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0460100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87474727..87479246) extracted from Lotus japonicus Gifu genome v1.2.
AAACATTTCATTAGTCATTTTGAGATGTTACAGAAAAGAAGGGCACATAATATTTGAGAGCTAAAGCCTTCAAGGTTTTA AACTTTTAAGCTGAACAATAGCAGGCAGTGACTATGGCAGGATTGAAAACTGCCTTTTGGGTTACATAGCCATGGGATCA CATATTTTGATTCTGATTCCCCCCACCTGCCCCTAAAAGGTCCTCCTAAAATCTCTCTCTGTGTGTATTTGTGGGACCTA GCTTGCTTACGGTCAGATTTTCTTGAATTCACTGCAATCATGTCACGGTTCTATTTCCGTTTAATTAAATTTAGCGACTC AAATTTAAAAGTTCAATTTCTAAAGTACAATCATCTATGATCTTAATCTCAGTTATGGAGTTCAAACTTCAAAGTGCAGT AAATTTAGGAAAATTCATCTCCAAGTAAATTTAAATCATGTGTGTGTGACTTTATCTTGCTTTGGTAGAGTAAGCACTTT CTATTTCTTACTATCTTTCCAACAATCTCATCTTTTTTTGTTTCTTTTCTACAATTGATATTCGAATTCTTCTTAATGGT ATTTCAATTAAAAGGCCATTTGCTTATCAGAAGTTAAGATTTTTGTGCAGTCACAACATCACTTCCTAGGGTGTATGTAT CGTTGGATGATTTATTGCAAGTTTCTGTCACCTGAGCCGTGCAGAAATTTATTATTATAGTGGTGAACTAGTACTATGCA TATGGTTTAAGTTTTTATTGATAGGTTGTGATCATAATTATCACAGGAGAAATTCATGGTTTTACTTATGCTACCCTGCT GAATGTATAGCCGTCATTTATTTTCTTCTTTTGGTTAGTATTTTTTTTTCCTTTTGTTCATGTTAATTTCTTTCCTTTAC ATGTGTGGTGTGAATTAATTAGCATGGCACGTGATTGTGAAACTATAGTTACTGCATGTTTGAGAATCCTTCTAAATTTG ACCCTAAATCAAAAATCAGTAATGGAAAGAAACTTCTGAAAGTAGCTTCTGCCTGTCAGAATAGAGTCAGAGGAAAATGA AGGTGATCCAAATATTTAAGTAGTGTTACCTGCTATGTCAAGTGGTAATATACAAACTAAAGCCATAGATGCTGTTCTAT CACCTTGACTATGGTTTTGTTACCACCTTTTTGCAGAGCTTGATTAAAGAGAAGCATATAAGGCTGCAATGGTCAATAGT GACCCTCCTGAACGTATTGAGGTGATTTATTACTAGTTTATTACTTTATCATCTGAAAAACACAAACATGCTTTGTTTCT TAATTTCAATTCTTTGGCATTCACAGGGAAAATATGCTGCAATAGTTGTGTGCTGGCTTCTTGGCAATGGGTGTCTTTTC GCGTGGAACAGCATGCTGACCATAGTAGATTACTATACTGACTTGTTTCCGGTAATTGATGCATTTTTCAGTTGATCTTG CAGCTCATTCCTCTGGTGTAGTAGCATTACTTAAAGAGAAGTTTTTAAATTTTGAAATGAGGCACAATCCCAATTTCGAC CACTTCTTCAACTTTCTTGTTTCTGTCAAATGAATATAGATCAAAATAGTAGAGTTAACTAACCTTCCAGATCATGTTAT ATTGGCAACAAAGAATAAACAATAGAGCTCACAGTAGTTTGATTTTCAGTTAAAGTTTGCAGTTCAGATATCCAATTCAA CACTAAAGGTTGAGTGGTACATAAATGAATCTCTGCAATCATCAGTCATAGATTTGTTATCTAATCCAAAAGATATACTA ATTTATATTGATAAAATCTTCTTACATTCTAGGACCCAGTTGGATACGGAGTAAAACAAACACTTATTAGAGCTTATCCA CTAGAAAAAAACATTGGATAAGCTCCAATTAGTGCTTTGTTCCGCATCCAAGCAGACTCATATTCTAGCTATGTTAGTTT CTTTTCTTCAATCAATGTGTATTGTGGTTCTCAGATACTGTTATTGTTATCTCATATAGTACAAGTCACTTTGCAGAAGT ACCATCCCTCTAGGGTGCTTACTCTTGTATACCAGCCATTCGCATTCGGAACACTAGCAATACTTGCTTACAAAGAGGCA AAAATCAATACAAGGATAAGGAACCTATTTGGATTTACTCTCTTTTTCATAGGCACTCTGTCAGTGTTAATTGTAAGTCC TGTTCACTTGTCTGTAAACTTTGATTCAGTTAAAATGGAGTTTTCCTGTTGATTTTTCTTTTCATATAAATCTGGCATAG TTGGATTTGGCAACATCTGGTAAAGGAGGGTTTGGGACTTTCATTGGCATATGCATAATCAGTGCTGCATTTGGAATAGC AGATGCTTATGCTCAAGGGGGAATGGTGGGAGATTTGTGCTACATGCTTCCAGAATTCATTCAGGTCAGATAACTGCCAA TGGAACTAGAGGCTCTTTAGATACCCGTTTGAAAGTATGAAAATGGGAAAATAACACACCTTGATACACTTTTTGTCGAA ATAACAAGTTCTTACTTCTAACTAAAGTACCTCGAGACGTGTTATTTCTCGTTTTCATACTTTCTAATAGGTATCCATTC TTACTATGAATTTCAAATAATCACTTCAAGATTTGCATATTTTTTTCTTATGCTTTTGTTGCTCCAGTCTTTCCTTGCTG GTGCTGCAGCTTCAGGAGCCTTAACTTCTGTTTTAAGGTTAATCACAAAAGCAGCATTTGAGAATTCCAAGGGTGGACTC CGCAAAGGAGCCAGTAAGTTGCTTAGCATTGTAACATTTAATTATTCTGAGTCTAGCTGCATTGATGATTATTGGTTAAC ATGGAAATATTTTTAGCTGCACATGGTTATAATTAGCCTCTATTTATGTTCTCAATCTTCTCGCTTTCTTATAAGATCAT GTTAATACATTGAGTCGTAAGATTTTGCAATTAATAGGTTAGAGGTGTTTGGATTAACTTCTCTTCTCTCATGATCAATT TTGAAAAATGGTTATTCAGACAACAGTTCACAATTTCTTTTAATGGATTAGATTTTTTCATGATTGTTCCATTCTTATCT GCTGTTCATAGAACTAAAAACAATTCAGACTATTGTCACTCAAGTCACATAAAGTTTAGTTACTGATCCATTTATACTGC CCCTGCAGTTATGTTCTTTGTCATATCAACATTCTTTGAGCTGCTTTGTGTAATGCTCTATGCGTTTGTGTTTCCTAAAC TACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACTGTCTCAGCCGACCTGGCAGCAGGTGGC ATCCTGACCTCACCTAGAGGAGTACTGTTTCTTTTCTTTTTTCAATTAGTGTGTCTTGAAAATTTCTAATTGTTTTGAGA CTCAATTTATAAGACTAGTGTTTTATTTTCCAGGATATAGAAGATGGAACACAGCTTGAGCGCAAAGGAAAGATGCAGTT GTTACAGGAAAACTTTGATTATGCACTTGATTTATTCCTAACACATGTGCTAACACTGTCTATATTCCCTGGATTCTTAT CAGAAGACACTGGATCACACAGTTTAGGCACTTGGTATGTTCTGTTCATTATACACCTAGTATATGTTTGATTTCATTTT GCTCATCCATACCAGCACTTCTAATCTTCTCTAATAATCGCTTTTGGAAAGAAACCAACATGTTTGATTTCTCCCAACAC TAAACCAAAACATATATGATTTCTTTACTTCATTTGCTTATGTTTCTTTCCACACAAACTTCTTCACCCATTGTCTTTTC CTTCATGACCAGAACAAGAAACAAAGAATGTTAAATATCTATGTTTTTGGTGTCAGTATGTCTGCTAATATAACAGTTGG TATATATTTTCCCTGTTGTTTCAGGTATGCTCTTGTTTTAATTACTATGTATAATGTGTGTGATCTGATAGGAAGATATA TTCCACTCTTGAAAACCCTCAAGTTGGAGTCTCGAAAGCTGATCACAGCAACAACCATTTGTCGTTTTTTACTTGTACCA GCATTTTATTTCACTGCTAAGTATGGTTCCCAAGGGTGGATGATAATGTTGACATGTTTCTTGGGGATATCCAATGGTTA CCTCACTGTCTGTGTTCTCACTTCTGCTCCCAAAGGTTACAAGGTTGGTCATGTTAAAGTGTTAAGCAATCAGAACTTTC TGTTGCTTAAAGCTATTCAAATATTTGGTTCATTAATATTGTTTTTTCCTGTTTTTTTTTTTGCAAAGTTACTTTTGTAG GGACCAGAACAAAATGCCTTGGGAAACTTGTTGGTATTGTTTCTTGTTGGTGGTATTTTGGCAGGGGTAGCACTTGATTG GTTGTGGTTAATTGGTAAAGGGTGGTGAGATGTTAACCGAGCTAAATGAGAAATTTATCTGTTTGATTTTATATTCAACC TAAATACCTAATGTAACGCCAATGAGGCCTCAGACTCTCTTTCATGTTTGCCTCATTGTAATTACAATTATGAATTTCAA ATTTTCAACTTTTGACTCTCTTTTCCAACATTTGACGTGG
CDS sequence (LotjaGi3g1v0460100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCAATAGTGACCCTCCTGAACGTATTGAGGGAAAATATGCTGCAATAGTTGTGTGCTGGCTTCTTGGCAATGGGTG TCTTTTCGCGTGGAACAGCATGCTGACCATAGTAGATTACTATACTGACTTGTTTCCGAAGTACCATCCCTCTAGGGTGC TTACTCTTGTATACCAGCCATTCGCATTCGGAACACTAGCAATACTTGCTTACAAAGAGGCAAAAATCAATACAAGGATA AGGAACCTATTTGGATTTACTCTCTTTTTCATAGGCACTCTGTCAGTGTTAATTTTGGATTTGGCAACATCTGGTAAAGG AGGGTTTGGGACTTTCATTGGCATATGCATAATCAGTGCTGCATTTGGAATAGCAGATGCTTATGCTCAAGGGGGAATGG TGGGAGATTTGTGCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTGCTGCAGCTTCAGGAGCCTTAACTTCT GTTTTAAGGTTAATCACAAAAGCAGCATTTGAGAATTCCAAGGGTGGACTCCGCAAAGGAGCCATTATGTTCTTTGTCAT ATCAACATTCTTTGAGCTGCTTTGTGTAATGCTCTATGCGTTTGTGTTTCCTAAACTACCAATTGTGAAGTACTACCGTT CAAAAGCAGCATCTGAAGGATCCAAAACTGTCTCAGCCGACCTGGCAGCAGGTGGCATCCTGACCTCACCTAGAGGAGAT ATAGAAGATGGAACACAGCTTGAGCGCAAAGGAAAGATGCAGTTGTTACAGGAAAACTTTGATTATGCACTTGATTTATT CCTAACACATGTGCTAACACTGTCTATATTCCCTGGATTCTTATCAGAAGACACTGGATCACACAGTTTAGGCACTTGGT ATGCTCTTGTTTTAATTACTATGTATAATGTGTGTGATCTGATAGGAAGATATATTCCACTCTTGAAAACCCTCAAGTTG GAGTCTCGAAAGCTGATCACAGCAACAACCATTTGTCGTTTTTTACTTGTACCAGCATTTTATTTCACTGCTAAGTATGG TTCCCAAGGGTGGATGATAATGTTGACATGTTTCTTGGGGATATCCAATGGTTACCTCACTGTCTGTGTTCTCACTTCTG CTCCCAAAGGTTACAAGTTACTTTTGTAG
Protein sequence (LotjaGi3g1v0460100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNSDPPERIEGKYAAIVVCWLLGNGCLFAWNSMLTIVDYYTDLFPKYHPSRVLTLVYQPFAFGTLAILAYKEAKINTRI RNLFGFTLFFIGTLSVLILDLATSGKGGFGTFIGICIISAAFGIADAYAQGGMVGDLCYMLPEFIQSFLAGAAASGALTS VLRLITKAAFENSKGGLRKGAIMFFVISTFFELLCVMLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGILTSPRGD IEDGTQLERKGKMQLLQENFDYALDLFLTHVLTLSIFPGFLSEDTGSHSLGTWYALVLITMYNVCDLIGRYIPLLKTLKL ESRKLITATTICRFLLVPAFYFTAKYGSQGWMIMLTCFLGISNGYLTVCVLTSAPKGYKLLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PIRSF | 3 | 380 | 378 | 6.8E-69 | ||
| PANTHER | 7 | 379 | 373 | 7.0E-205 | ||
| PANTHER | 7 | 379 | 373 | 7.0E-205 | ||
| Phobius | 12 | 31 | 20 | - | – | |
| TMHMM | 16 | 38 | 23 | - | – | |
| Phobius | 32 | 50 | 19 | - | – | |
| Phobius | 51 | 71 | 21 | - | – | |
| TMHMM | 53 | 70 | 18 | - | – | |
| Phobius | 72 | 82 | 11 | - | – | |
| TMHMM | 82 | 99 | 18 | - | – | |
| Phobius | 83 | 103 | 21 | - | – | |
| Phobius | 104 | 108 | 5 | - | – | |
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 109 | 129 | 21 | - | – | |
| Pfam | 123 | 378 | 256 | 1.9E-29 | ||
| Phobius | 130 | 140 | 11 | - | – | |
| Phobius | 141 | 162 | 22 | - | – | |
| TMHMM | 144 | 166 | 23 | - | – | |
| Phobius | 163 | 181 | 19 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 182 | 203 | 22 | - | – | |
| Phobius | 204 | 261 | 58 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 262 | 281 | 20 | - | – | |
| Phobius | 282 | 292 | 11 | - | – | |
| TMHMM | 291 | 313 | 23 | - | – | |
| Phobius | 293 | 313 | 21 | - | – | |
| Phobius | 314 | 324 | 11 | - | – | |
| Phobius | 325 | 344 | 20 | - | – | |
| TMHMM | 325 | 342 | 18 | - | – | |
| Phobius | 345 | 349 | 5 | - | – | |
| Phobius | 350 | 374 | 25 | - | – | |
| TMHMM | 352 | 374 | 23 | - | – | |
| Phobius | 375 | 382 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of LotjaGi3g1v0460100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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