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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0461000 |
| Transcript ID | LotjaGi3g1v0461000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G65790.1 receptor kinase 1; Swiss-Prot: sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7; TrEMBL-Plants: tr|K7KXE1|K7KXE1_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0461000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87620012..87621584) extracted from Lotus japonicus Gifu genome v1.2.
GGCTGCAAGAAATACTTTCAGAAAGCATCACAAAAAGAACCTAAGGAAGGAAGATGTTGATTTGGAAACATTCAATTTCT CAGACTTAGCTTATGCCACGAACAACTTTTCAAGCAGTAATAAACTTGGAGAAGGTGGCTTTGGACAAGTATACAAGGTA ACAAAAGACTGAGATGGCTTCTCCTACCCTTAGGAACTTTCTAACCATATCATATTACTTTGTAGGGAATGTTGATAGAT GGACAAGAGATAGCTGTGAAAAGGCTTTCAAAAAGATCAGGACAAGGGTTGGAAGAATTTAAAAATGAAGTGGCACTGAT TGCCAAACTTCAGCACCGTAATCTCATAAAGCTCCTTGGTTGTTGTATTCAAGGAGAAGAGACAATGTTGATCTACGAAT ATATGCCCAACAAAAGCTTGGACAACTTTGTTTTTGGTACAAGCATACTTTTTAATTTAAAACAATCTTCTTATTTCTTG TGATAATTTATGAAACTAGGGAGACTGTAGTGTTATGCTAAATATGTGTTTAATTGACCAGATGTCACCAAAAGGATGTC ACTGGATTGGGTTAAGCGTTTCAACATTATTGGTAGCATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCAAGACTGA GAATTATCCACAGAGATCTAAAAGCTAGCAATATATTACTAGATGAAAATTTGGAACCAAAAATATCAGACTTTGGCTTG GCTCGAATATTTTTGGGAGACCAAATCGAGGCAAACACAAATAGAGTGGCGGGAACATAGTGGTTACATATCTCCAGAGT ATGCTGTCCATGGGCATTTCTCAGTAAAGTCAGATGTGTTTAGTTATGGTGTGATTGTACTAGAGATTGTAAGTGGGAAA ATGAATAAGGGATTTTCAGGCCCAGAACAGTGTCATAATCTTCTTGGATATGTAAGCATAGTCACCTAGTTACCTTGCTA ATTGTCTAATTTTGAATTGTTTCCTATCACTAATTTGACTTTCACTTTATTAGGCATGGAGATTGTGGACTGAAGAGAGA GCACTGGAACTATTGGATGAAGTGTTACGGGAACAATACACACCATTTGAAGTCATACGAAGCATACAGGTGGGCCTATT ATGCGTGCAACAAAGGCCAGAAGATAGACCAGACATGTCATCTGTAGTTCTAATGCTAAATGGTGAGAAACTATTGCCAA AGCCAAAGGTTCCTGGCTTTTACACTGAAAAGGATGTAAGTACTGAATCAGATTCTTCACTGGGAAATCACAAATTCTGC TCAGCTAATGAAATGTCCAACACAGAGATATATGCAAGATAGGGTATTGAGTCAAGGAAAATGACAAGTCTTCGCCTTCC AACGCGGGATATATAGGTTATTCAAGCAAACATAGTTTGTGAAATAGCTCATGTTTTTACTATTATGAACCTGTGTTTTA TCGGTCTAATATATCCAGACACATGCATGGGATAAACAAAATTGTATATGAAGACAACAAAACTCAATTGCTATTAGTAA GAACTGCCTCAAGCTATTTGGAATAGACCTTCCCCACAGCCTGTGCAAGTTCA
CDS sequence (LotjaGi3g1v0461000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATTTGGAACCAAAAATATCAGACTTTGGCTTGGCTCGAATATTTTTGGGAGACCAAATCGAGGCAAACACAAAT AGAGTGGCGGGAACATAGTGGTTACATATCTCCAGAGTATGCTGTCCATGGGCATTTCTCAGTAAAGTCAGATGTGTTTA GTTATGGTGTGATTGTACTAGAGATTGTAAGTGGGAAAATGAATAAGGGATTTTCAGGCCCAGAACAGTGTCATAATCTT CTTGGATATGCATGGAGATTGTGGACTGAAGAGAGAGCACTGGAACTATTGGATGAAGTGTTACGGGAACAATACACACC ATTTGAAGTCATACGAAGCATACAGGTGGGCCTATTATGCGTGCAACAAAGGCCAGAAGATAGACCAGACATGTCATCTG TAGTTCTAATGCTAAATGGTGAGAAACTATTGCCAAAGCCAAAGGTTCCTGGCTTTTACACTGAAAAGGATGTAAGTACT GAATCAGATTCTTCACTGGGAAATCACAAATTCTGCTCAGCTAATGAAATGTCCAACACAGAGATATATGCAAGATAG
Protein sequence (LotjaGi3g1v0461000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIWNQKYQTLAWLEYFWETKSRQTQIEWREHSGYISPEYAVHGHFSVKSDVFSYGVIVLEIVSGKMNKGFSGPEQCHNL LGYAWRLWTEERALELLDEVLREQYTPFEVIRSIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPKPKVPGFYTEKDVST ESDSSLGNHKFCSANEMSNTEIYAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 12 | 146 | 135 | 5.6E-24 | – | |
| PANTHER | 33 | 143 | 111 | 5.2E-34 | – | |
| PANTHER | 33 | 143 | 111 | 5.2E-34 | – | |
| Pfam | 33 | 136 | 104 | 5.0E-9 | ||
| SUPERFAMILY | 34 | 151 | 118 | 2.82E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0461000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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