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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0463100 |
Transcript ID | LotjaGi3g1v0463100.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | transferring glycosyl group transferase (DUF604); TAIR: AT4G15240.1 glycosyltransferase (DUF604); Swiss-Prot: sp|A6LLU8|RUVC_THEM4 Crossover junction endodeoxyribonuclease RuvC; TrEMBL-Plants: tr|A0A151S6C9|A0A151S6C9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0463100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87849771..87858431) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCACATCACAACCTTCATTGTTACACACTCACACTTACACTTCCAAGTTCCAACAAGCACCATAGACATAGAGTGTG GATCCAAAAATCTTGTGTGACCTGGCGGTTTTTTCTTTTCAACGGCCAATTTTACTTGGCGGTTACAGTTGTTATTTTTA TACTCTTTCTCACTTTCACTGTATCCGTATCCATCTTCCTCACTCACTTCCTTTTCACTATTTTTTTCAATTTAATATTT AATTTAATAAAAATGATGTTCCACCGAAGGAAAAAAGAACAACAACAATCCACTTCAACCTTGCCTCTATCACAGTCGTC ACCAATGCCTCCTCCTCCGCCACCTTCCTCCGCCGCCACCACCACCTTCCTCCGACCATCATCCTTCAAATCCTTCCTCC TCATCCTCTCTCTCCTCCTCAACCTCTACCTCCTCTTAATCCTCTGGACCCCTTCCTCTTACCCCTATCCCTTATCCCCG TCCACCGTCATCACGCGCTTCTCCCTCACCACGCGCCGCCACATCCTCTTCGCCGTCGCCTCCTCCTCCCTCTCCTGGCC CCGCCGCCAGTCTTATCTCAACCTCTGGTACTCCCCGAACACCACCCGCGCACTCGCCTTCCTCGACTCACCCCCTCCCA ACACCACCACCACCTCGCCGCCAGTTATCATCTCCGGTGAGGCGTCCCGCTTCCCCTACACGTTCCCGGGAGGACTGCGC TCGGCGATCCGCGTGGCGCGTGTAGTGAAGGAGGCGGTCGATCGGAACGAGACGGATGTGCGGTGGTTCGTGTTCGGCGA CGACGACACGGTTTTCTTCGTGGAGAATGTGGTGAGGGTTTTGGCGAAGTACGATCACAATCGGTGGTACTACCTTGGGA GCAACTCTGAGAGCTACGATCAGAATGAGAAGTATTCGTTTGAGATGGCGTTTGGGGGAGGGGGTTTCGCGATCAGTTAC TCCCTGGCTAGGGTTTTGGCTAGGGTTTTGGATTCCTGTTTGAAGAGGTATGGTCATTTGTATGGCAGTGATTCCAGGAT TTACTCTTGCATTGCTGAGCTTGGTGTTGGGTTGACCCATGAACCTGGTTTTCATCAGGTATTATTTTGTGATTTGGGTA TGTTAACTGTGGTTTTTTATTAGTTACTTGCATGTTCATTATGAGGAACAATTAGCTCAATGTGGCAATATTTGTGTTCT TTACTTATGGATTGATCAGATATTAGTTTTGATTGAAAACCAGTTAATGTGGGTTGTTTTCATGAAGTGCAATGTTTGGA AACTTGTTTGAAAACAACGTTGAAACAAATATTATAGTGAACAAGAACAAAAATTAAGGGAAGTTGTAGCTGCTGTCCAC CATGATTTTGGTTTCACAGTGGTTCTTGAATGACTTTCCAAACATGCACGAAGAGTGGAGTGATAATGGGGTGGGAACCG GGAAGCATTGCTTTAAGTTTTTCTTTGGTTATCTACCAGATGTGACTTTTTCTGTCTGCTAAATGTGCTGAATTCTTAAG CTTATAACCATTGCAATAATAGTTCCACCATCAATGTTGAGGATTTAATTGGATACGAGGGCACTTGTTAAGGTTTCATT AATAGAAAGTATTTATGAAAGCAGTGCTTTCTCGAGTACCATCTATTCAATATTGGACTTCTTGATAAAGAAATTTTGTT TCTTTGATTTCTTAAATAGTTCCCTTAACAGGACCCTTATGACGAATGATAATGTACAACAGTACATGGTGCCTCGGTGT TCAAATTTGTTGGGTGCATTTCATTGTTTGTGTGCATAATATTTACTTACAACAACTATGACTTCTACCCTCTCTCATGC ACCTTTTGAGGTATGCAAGGCATTTGGTTTGAGATTGTATCTTATTAAATTAAATTCTTTAGCATTTTAAACAAAATTCA GAGACAGTGCTTGAGTATGTTGTCTTGGTCTAAGTTGATTGTTTTTTCTGGATCTCATTTGGGCTTCTTGACTTGCATTG TTCAGGAGCATTCGTTTATCTTTAAGAATAAAACATGTGCTAGTAAAATGATAGACTTGATAGAGATAATTATTTAGCCC TTTTTCTTTTAACACCAGTTAGATATGCGGGGCAATTTGTTTGGTATGCTGGCTGCACATCCATTATCTCCCTTGCTGTC CCTTCATCACTTGGACGCATTGGATCCTCTCTTTCCTGACATGAACAGAACAGAAGCTTTGAAACATCTTATTGCAGCTG CAAATGTTGACCCTGCCAGGATCCTTCAGCAAACTGTCTGCTATGATCGATCAAATTCTTTGACTTTCTCAGTTTCTTGG GGCTTTGCTGTACAGGTCTTCCAAGGAAATGAACTTCTACCTGATCTGCTTACCGTGCAGAAAACTTTTACGTCATGGAG GAGGGGTAGCAAAGTTTATGCCAATTTTATGTTTAACACAAGGGACTATCCTAGAGATCCTTGTAAAAGGCCTTCTGTAT TTTTCTTGAAAAATGTTTCATCTGATAAAAGGCGCATATGGAGCAATTACAGTAGGCGTGTAGTGAGAAACTGCATTGAA TCAGATGTGACAAAGCTGAAGGAGATCATCGTTTTTTCAAGAAAGCTGGATCTTAGCATTGAACAGGTATTGTTCAATTA ACTCCGGAAATGGTTCGTTTGAAATTTGTGACTGTTTGTTTCTCTTATCTGTTTGCATTCTTGCTCTATCTATTCAACTG TATGTTGGGTTTTGTCACAGATGAAAGCCCCCCGTCGTCAGTGCTGCAATGTTATGCCATCTTCTAACAAATCAATCAGT ATCCATATTAGAGAGTGTGAAAATGACGAACTGATCTCCATGCAATTGTAGCATTCTCTTAAGGAGCTACCTCCCTTGAA AGCTTTGGAATTTTCATGAGCACGGATGTTTGGAGGAGTTTTGTCCCGTGTTGAAGCTGATTGAGGTGAATGCTTATTCT TTTAGGTTGATCTCAGGACTTTGTTTTGATATGATCGTTTCATTTAAATTTTGAATTATTTTATTAATTTCAAAGTAAAT TTTTTTCAACATTCTTCAATTAGTATATAATTTCTACAAAGAATGCAATCATAGGACTGCTAGAAGTATGTGACCAAGCT TATTTTCTTAAAATGTTCTTAGTATCATTGCCTTTTCTGATGTCTTTTTCCCCATCCTCTTTGCAGAAGACGAAGAACCT TGTCCTCTTCGTAGAAGAAAAATATGTGCTTGAAGATGAAAACTGCAAATCTTGCTGGTGATGAACCTCTCCTGGGTTTG TTATGGCTCGCCTGAAAATCAACAAACCTCTCCCTTGCCTCAGTTTTGTAGCTTGTTTTTTTCGCCGCGTAGCTGTGTTT TTTCAAATGGCTTATTTTCCGGCAATTGTACATGTTATTGCATCCATCCTGTCCATTTCTGATGCAAAACAATTCAAGGA AGCTCCCATGTTGTTAGGAGTGAGGTAACCTCTCAGCCAAAGGATCAATTTAACTCTGAAATGTGATCCTTATGAGGACT ATGTCTCAACTTATGCTTGCTAACTTGTGATTTGTCTGAAAATTCTTCAAATGTTACATAACTTTTTGCTCGCTGCATAG TTGAAGTACATCTATAACCATTGGAAAGTCTGTTAGAAATATTTTAACGTGACTGATTAATTGTGTTCATATGGATACAA AGTTTACATTTGGGCGTGAAGCTGGGTTATCTGGAGTTCCTGACTGTTGTTATATTTTACTCACTCTGTTCCTAGTTATT ATCTAGAGATAGGGAAAAAAACCATAGATGAAGAAATCCAATTATTTTATAGAACTTCTTGTTCTCTCCAAATACCTGGG ATCAGTTGCAAGCCTAGCTCCCAGGATCTGTTGGTGAAGTGAAACATATCTGCTTCTGTTTCCTTCTCCTTCTTATAGGT CTTAGATTTGTCCTTTGGGTTACCAGTAGTTATTTAGCCGTTTCCTTATTTATGTAAATATTATTGAATGGTATCATGAT TAGTTGATTTAATTTGGGTGTTACAATTCCCCACAATTTTTATTGTAGTAGTTAAACCAATCCTCTGGACCAGGCTATCT TAGGCAATAGCTCGGTAGCCGGTAGGTATACACCCTTCCAAGTCCTAAACATTTTGCATAGTGGACTTGTAGTAGTTAAA CCCTTTATTCGGGCTGAGCTATCGTCGATCCACTTCCTGCTTTACTTTTTGTATAGACTACTTAAAAATGGAAGTGACCA AGTGTTACATTCATTGTACTTGAGAATTATAATCTGGGCATAACAGTGTAATTGGAGAAATGTCAATTTATGTATTTTTC AGCTTTACATGGATACATAATTAGGAAGATATTTTTTTATTTGTTCTCATACAGATAAAGAAGGGAAGGAGCAAGTTAAG AGGCAAAAAACAATTCTTGTTGCAGAAACTTAGTCTTGAGGGGTTTGAACCCTTCACACACGGTTACTGACCAACCAATA GACTTCCAATTACTGACCAACCAATAGACTTCCAATTACTGACCAACCAATAGACTTCCAAAGTTCTGCCCCATCCCATA CACATCTTGCAAGTTACAACTTGAGCAATCTCCACGCAATTACATTTGAGCGTTTTCTCCCTTTTATATGGGTCATGGTG AAGAAAATCTTCATTGTGATTTTTTGGTTGGGTTTTAAGTGGTGGGGGGGAGGTAAGTAGAAGGCAAATAAGAATGTGAT GGCAGCGTTAAAAATGGTTTGATTCATTATCTTAAGCGGAGTCCTCTCATATTTATATTTTTCTAATTTAGAGGGCTTTG TTGTATTTTTTTACTACTAAAGTGAAATGTTTTTTAAATTTATTACTGTGTCATGTCATGCAGAGACATTTTATTAAATT ATCTAAATACTTATTGGTTATGGGAGCGCAGCAGCACTCTCATGAGATGGTTGACGTAGTGGTTTAACACTTTGTTCCTT AAGTAAGTAGTTCGGGTTTGACTCCTAGTTCTTGTAAATGGAAAAAACTCATTGGTCAGCTCCTACTACCGTGAGATAAT GAATTAGTTTCACGGCTACTAGTTATGGGAATATTGTCGTCAAGACAAAAAAAAAGTGTAGGTATAATGATTTAGGACAA GAACAAATACTTAATATGACAAGTAAGCTGTAAGCATATGGTTAACATTATCACGAGGCTTTGTGTGAACTCTTTATTTT GATGGGGGTTGGGGAAATATGGCAATGAAAACGGATAAACGTAGAATTTGAAACAAATAGCTAAAACGGTAAAAGCAACC GTAGAACTATGCTTTTAGGCCTGAATTCACTTGAAAACTGGCATTACACGTTAACGATGGTGTTGTTGTATTCCCACCTA TTTCTCGTGGCTTTTAAATGCAGTGGCCAAACCATAGAAATTGTTGCTGTTGTTGTGGAGGAACAGGTGGCCTACCATTT TCTCCCACTTAAACCTTCTTTTATCATCTATAGTCAATGCCTACTTATTCAACTACTTGACTTGAATCCAATTACCAAAA ACACCACCCAAATGTGTATCAAGGATTGGTTGATTCCTTCCGCTAGCAGATGTGGATGTTTCTAACTTAAACAGAATTAT CTTATGTGGAGAAGATCAGTCTTAGGCAAAAATAAAAAAACGCTAACCAACCATGACCAAAGAAGTGGTCCATGCTTGAT TTCTATTAATTAATATATCTGATTAAAGTCTTTTTTATGTATGGAAAAAACCTTCGTTGGAGAGCTAGTCCTATTGTGAA ATGATTGTTCTTAACTCGAATAGTATTGTACACAATGCAGGGTATTTGTATTAGAGAAGAAAAAAAAAGGACAAGCCAAC CGTACCAATCTAATTGGAAGGGACCATACCAAGTTTCTTCTCACATACCTACCATAGTTCCACACATGGAATAATAACTC ACTTGAAACGTCAAAAAAATCCACAGCTTTCTTAGCCGTTGATCACGGTGGTTCTTTGCTTAATTACATGACTCAAAACC TTGCTTACACACATCACATGAACCTTGTTCAATTGTCACACCATTAATTCTCTGTTTCTGCAGAATTAGACCCACTTTTC CCCCTTGTTAACACTTAACAACATGCAGTTATTTCACAAACACACCACACTGCAGTCTCTGGTTAACTTTCTTCTAGTCT CTTCTTCATTTTGTGTCCTTTATGTCCTCATATCAGTGCTGTTCCTAGGGACATCAAAACTAGTACATGTCCATTCTTCA TCACAAGAATTGTCCACACCCACCACTCTTGATCACCTTGTGTTTGGAATTGCTTCAAGCAAGAGCTCATGGGCAAAGAG GAAGGACTATGTGAAGCTTTGGTGGAGAAACAACAATGCAATGAAGGGGTGTGTGTTCCTTGATACCCTCCCTGATGAAG ATGAAGACAATGATGCTTCTGATTCTGTTCCTCCTCTCTGTGTCTCTGAAGACACTTCGCGGTTTCGCTACACTTGCCGA GGCGGGCTTCCCTCAGCGATTCGCGTGGCGCGTGTTGTGGTGGAGACTATAGCCCTGAAGAACAATTCAGATGTGAGGTG GTATGTGTTTGGAGATGATGACACTGTTTTCTTTCCAGAGAATTTGGTGAAGACTCTTTCCAAATATGATCATGGCCTTT GGTACTATGTTGGGGCAAACTCTGAGGTTTATGAGCAGAACCGGTTGTTTGGGTTTGGAATGGCTTTTGGGGGTGCTGGT TTTGCTATCAGTTCCTCTCTGGCAAATGTCTTGGTCAAGGTTTTTGATTCGTGTTTGGAAAGGTACCCTCATCTCTATGG AAGTGATGGCAGGGTGTACTCTTGCTTAGCAGAGCTTGGTGTGGGATTAACACATGAACCTGGTTTTCATCAGGTAACAT TATGATTATGTTTGATTGATATAGGCTATCCCTTTTACTTGAATAAATGCTTTGACGTTTATGATGAACAATTACACTGA GAAGCTGAAAATTATCGGTGATTTGATTCTGAGTAAATCATGATTTTGATCCCTGGTAATGTAGATCATTTTAGTCCTAG AAAAGTGGAAATTCATCGATCCAAAAGCTCTTGAAAGTGTAATTTGATCCTTGAAAATATATATAGAACAATTAGCTCAT ATTAGTCTTAGTCTCTAAACATATAAACTTAAATTCATATCACTTTTTTGATATGAAGTTGGTGTAGCTTAAATAAAAGT GCCGGATTCAAGTTTCTATAAATACAACTGCATTACATGATTTTGCCTCAGTGGATGACATGTGGAGTGAATCAGCAAAT TCGTCACTGTGATAGTGTTAAATATCGGTCAAGTTAGTCCCTAGGTTACATAAAATGCGACCACTCAGGGATTTTCAAGG GTATTGCCTTCTTTTGGGACTAACTTATCCAACGTATGATCTCTCAGGGACGAATTTGGTGATTCACTACTTAAAATTCA TATCATTCTCTACTTGATATCCTTACTTTTCTTGATATTGTACTTTTGTGTTTATGAAATATGATCAGGTTGATTTGAGG GGAGATACCTTTGGCCTATTAGCTGCTCATCCAGTAACTCCCTTGTTATCCCTGCATCACCCTGATTACACTGATCCAAT CTTTCCAAACATGACAACCACACAAGCCCTGAAGCATTTATTCAAAGCTGCAAGTGTTGATCCTCAGAGGATGCTACAAC AAACAATTTGCTATAACAGGTGGTTTTCATGGACAATTTCAGTGTCATGGGGATATGCAGTTCAGGTTTTCCCTCACCAC ATGTCTTTGCGTGAGGTTCTGAAGGTGCAAGAAACGTTCAAGCAGTGGAAGAAAGGAAACATGTTGGCAAAAGCATACAC TTTCAACACAAGAGGAACTCCCCCTGACCCATGTAAGAGACCCTCAGTTTTCTATCTAGACAATGTGTCTTTTGGTAATG ATGGCATCATCATCAGTAGTTACAAGAGATCGTTTCAAAATTGCTCAAATGATGATCTGTTATCTCCTAAGAGACTAGAA GAGGTCAAAGTGGTCACCAAGAAGCTAGACCTTGATATCAAACAGGTACCGCTCATGTGCTATTTTTATTAATGTACTCA AATACTTACATCAATGTTTATGCTATAAGACAAGCTGAAATAACATCTTCTAACTATAACTAAATAAATATAAGTATATC AGACACTGGTTTTTAACATTGGTAATGGTACTTACGATATGAACTATCTTTTGTATTCAGTTGAAGGCTCCAAGAAGGCA CTGCTGTGATGTAATGCCCTCTAGCGCTCGTGACCAACTGGAAATCGAAATCAGAGAATGCAAAGATGAAGAATTGATTT ACATGCACTGATACAAGTGTTGCATTAGCTGTGATCACTTGTTGGTTATTTTTCACCTGATATAGTGTACCAAGGGTCAT CATATAGTTGATAATAGTGTAATTACATGAAACTACAAGAGTAGCTTTTAACCCTGACTTTTTGTTTTCTGAGAGTGTAG AGTTAGTGAGAAAAAATAAACTAAATAACATATCTATGACTAAAACTACTTAGCCATCAATGTAATACTTTATTATCTTA AAACCATGTTGTTATTCAAGAGGTAGGAAACCTTACATGAAATTAAAAGGGTATAACTTACATTTTTTAACAAAATCCAC AGGAATGAATACAATAATCCA
CDS sequence (LotjaGi3g1v0463100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGGGGCAATTTGTTTGGTATGCTGGCTGCACATCCATTATCTCCCTTGCTGTCCCTTCATCACTTGGACGCATTGGA TCCTCTCTTTCCTGACATGAACAGAACAGAAGCTTTGAAACATCTTATTGCAGCTGCAAATGTTGACCCTGCCAGGATCC TTCAGCAAACTGTCTGCTATGATCGATCAAATTCTTTGACTTTCTCAGTTTCTTGGGGCTTTGCTGTACAGGTCTTCCAA GGAAATGAACTTCTACCTGATCTGCTTACCGTGCAGAAAACTTTTACGTCATGGAGGAGGGGTAGCAAAGTTTATGCCAA TTTTATGTTTAACACAAGGGACTATCCTAGAGATCCTTGTAAAAGGCCTTCTGTATTTTTCTTGAAAAATGTTTCATCTG ATAAAAGGCGCATATGGAGCAATTACAGTAGGCGTGTAGTGAGAAACTGCATTGAATCAGATGTGACAAAGCTGAAGGAG ATCATCGTTTTTTCAAGAAAGCTGGATCTTAGCATTGAACAGATGAAAGCCCCCCGTCGTCAGTGCTGCAATGTTATGCC ATCTTCTAACAAATCAATCAGTATCCATATTAGAGAGTGTGAAAATGACGAACTGATCTCCATGCAATTGTAG
Protein sequence (LotjaGi3g1v0463100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGNLFGMLAAHPLSPLLSLHHLDALDPLFPDMNRTEALKHLIAAANVDPARILQQTVCYDRSNSLTFSVSWGFAVQVFQ GNELLPDLLTVQKTFTSWRRGSKVYANFMFNTRDYPRDPCKRPSVFFLKNVSSDKRRIWSNYSRRVVRNCIESDVTKLKE IIVFSRKLDLSIEQMKAPRRQCCNVMPSSNKSISIHIRECENDELISMQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 25 | 25 | - | – | |
PANTHER | 1 | 209 | 209 | 3.8E-101 | – | |
PANTHER | 1 | 209 | 209 | 3.8E-101 | – | |
Phobius | 1 | 8 | 8 | - | – | |
Pfam | 1 | 183 | 183 | 4.6E-64 | ||
Phobius | 9 | 20 | 12 | - | – | |
Phobius | 21 | 25 | 5 | - | – | |
Phobius | 26 | 210 | 185 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0463100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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