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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466200 |
| Transcript ID | LotjaGi3g1v0466200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Succinate dehydrogenase subunit 3; TAIR: AT4G32210.1 succinate dehydrogenase 3-2; Swiss-Prot: sp|P0DKI0|SDH31_ARATH Succinate dehydrogenase subunit 3-1, mitochondrial; TrEMBL-Plants: tr|I3SJ95|I3SJ95_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88156130..88162508) extracted from Lotus japonicus Gifu genome v1.2.
GCTCTTAATTTCACATTCAGCCTCCCAAACCAAATTCCCTTGTCACTTTGTCTTCTCTTCGTAACTCTCTCTCTCTCACA ATTCATCACTATGTCGTTGCTTCTCAGATCCACCAAGTCCAAGCTCTTCTCTTCCTCTCTTTCCAGAACCTTCTCCTCTC TCCACCGCACCGCTCCGCCTCAGATCGGAGCAACCACCGCTACCGGTACTTCATCGCCCACTCTCTCAATTTTCTCCGTT CCTTTTTCATCTTGTTGATCCAAAACTATTCATGAATTTCATTTCCGATGCCGAAACAAGTTTAAGAAATGGAATCAATT CCATTCATGCGAATTAGGGATTTTCATGTTTCTCGTAGCGTTGAATTTCGAAACGAATCGTGCAATTTGATTGCATTTGT AATCGCTGATATTGAGTTTATCATGTTCTGATTCGTCGTTTCTTTTTGCCATTTCAGGTGGTGAAAACACTTCCAGGGGA AACTTGACCGGTCTTCCCAAAGATTCCAATGACTTCAGCTCCTTGGTATGCGCCTTTGCTTTGTTCTGTAACTGATTACA GTCATCATAGAGATTTCATATGTTTAAGCATGCTTCATTGGCTGAACTATGCTATATGTGCCTTTAACCATCTTAGTTTT ACGACTTTGCTGCCAAAATGTTGTGAACCTGATTTGATACTGATAGATTTAGGTCATGCATGCATAGTGTCTTAGAAGTT TAAGCTAATTGCCATCATTATTTAGTGTCCTGGTTTACTGTTATTACTTTTGAGGGGGTTTTGCAGATTAAGAGTATGAA TGTGAATTGTTCAAGTTGAAACTAGTTTCTTAAGCCGCAAATTGGAAACGATTGAAACTTGTTGCGTCTTAAACTTGACT AGTTTAGTGTCAAATATCAGTTTGAGGTTTCAAATTGTAAGAGAGACTGGAGTGTAATAGGGAAAGGAATCAATTACTAG CAGATGTCGTCACGTTCAAGAATGACATCAAATTTAATATATAGTTGTTAATCACCAACAGAGGGATATGATGTAGGTGA TTATTGTAAAAGGGAAAGAGATCAAATTATAATCCCGAGTCTTGATTTCCAATTGGAATTGCTGAATTGGAACCAGATTT CTGCACTTATGTATATGTATCAAATTTTTGTTATTCAGATAGATTATAGTGGCTTCTTATTGCAAGCATTACAATTTGGA ACCAAGTGATTCCGTCCCTGTGTAAACCCTCCAGTACCATCTTGCACCACATGCAATTTTTTTGTTATTCTCTTATCCTT TTCTGAAGAATATAAAGTGAACCAGTGCATTGTACCAGACACTGTTTTGCACAATCATTAGTTTAGCTCTTATAAGCTTC TATTTCCCTTGGAATTGTTCTTTTATATCAGAGATTCAATGCTTATGGACTGGACGCTACTCTGCTGGCTGGAGCTAGAT ATGGTACTAAAGCTTGTGCTGCCAATGGTCCAATGCAAATGGTAAGTTCCTTTGTTATTTTTATTGAGTTGAGTCTATTT GGCTTTCCTTACAGGGCTAATGATTTACATTTCAATAGGGAGTCATGGCTAGAAGTTTTCAGAGAGGTGCAGGTCCTGAA CCATTGGGACTGACCAGTCACAAACGTTTTATGAGCGACACCTCAAGTAAAACTACTGAGACAAAGCCTTATGGTCTACG TCCATTGTCTCCTCATCTTCCTGTTTATCAGCCCCAACTTTCTTCGACACTTTCAATTTTCAATAGAATTGCCGGAGCTT CCCTAGCTGCTATCATTGTGGCTTTTTATATGATATATATGAAAATGGGTTTGATTAGCCTCACCTATGATTCATTCTAC CAGTTTGTATTTTACTCATCAAAACTCAACCTACTCGCCATTGAGATTTCTGCCTTGGCCACAACCTATCATCTATACAG TGCAATCCGCCATTTACTCGTATGACGTCACAGTCATCACTGATTTGATCCTGAGGTAATTTAATATTTTTCTTGATTCT TGTTTAGTTTTTTATGGTCACAATTACTCGAGCCAAGCATGGTCTGTTAACTGGGTTTGCTTGGGGTTGATATTCAGCTT TTCCAAATATGCTTCAGCACATTTTTATTGCCTTTGAAAGTGTATAACATGTTGTCTTTTCAGATGGAACTTGCATGCTT CAACCATGGAGGCAAACTTCCTCTTATATAAGGAGTTTCATTAGGCAATGTGTATTTGCTTTTGATAGTTATGTTATTAT CAACTTAATAATTACAATCTTGGCAGCACTTCATGTTTAATGCGCAAAGCTGCATCTATTTTGCATCTGAAATTTCAGTG ATGTTTTTTCGCACCCCTCAGATTGCATGTAACTTAATGTTGCATTTAATAAATGCATTTTAGTTTTTGGGACTCTTTCC AATAGCCATATTATTCTTATACCTACAGTATGTTTGAATGAGTTGGGAGACGAAAATTAAGTTGACTTGTTTCTGATATG ATTTCAATGGAACATCTGATGTTTATTTCTTTTAACTCAAAATTGATTGTGGGCAAACTTGTGTTTTAGTAGAAATGTTG AAATTTAGTTTTTGCAATTATTTTGAAATTGTACACTAAATTTAGGATAGACTTGGGGTTTAAGATTAGAGTTTTTAAAC GCAATGTGATTTCACTTTTTCCGATGGTACCAGCGGAAAAAGTTTTAATTTGTCTCGTTAAGGTCAACGTGGATTGGGGA AGTAGAATTTTGTCACGTTGAGTTCGTCAGAATTTTGTCACGTTATTGGAGTTAGTAACTTATAAGAAGTCTACACTTAT TAACTAGCTTAAGCCTTGTAGAGTAGGGTCAATGAGCTGGCATGTAGATCAATGAGCTGGCATGAGCTGGCAAGTTTGTT GAGAGTAGTTATCAGATTGTTATGACAGCTCTTAGAATCAGTTATCTTGTAGGGTAGAGTAGCTGAGCTATATAAGCTCT GGTAATCGCTTGTACATACACTTTTTGATCAATTGAGAAATAGAATGAGATTTCTCTCTGTTTGGTTTTCTATATGGTAT CAGAAGACGAAACTTAACTGCTTCCTGCGTCTCTGCGATCGTTGATCTTCAACGATTTTCATCGTTTTTCGCTTCCAAGA TCGTTCTTCTTCTTCGATCTTTTTCACTGTTTTCATTTCTTTTTCGGCTTGATTCCACACGAATTGAGTATCGATTCTCT GGTTTCTGGCGTTTTCAGTATCGATTCTCTGGTTTCTGGCGTTTTCAGTATCGATTCTCTGGTTTCTGGCGTTTTCTGCA ATCTAGAGGTTTTGTGATTTCTGCAGATTCTTGTTTCAATCATGGAGGCATATGCAAATCCATTGTTTCTTCATCAAACG GATGGCGGAAATTCTGTGCTTGTGAGTCAACCGCTCACTGGTTCCAACTATCACACCTGGAGTAGAGCCATGAAAGTCGC TTTGTCTATCAAGAACAAAACTGGCTTCATCGATGGAACGATTCCAAAGCCAGCGATTGATCATCCAAATTACGGTGCAT GGATCCGTAACAACAATATGGTTATGTCTTGGATCTACAATTCTGTTTCCAAGGAAATTATTCCTAGCATCATGTTTTCT GATTCTGCTTCAGAGATTTGGAACGATCTTAAGGATCGTTTTCAGCAACAAAATGGACCACGCATTTTTCAGATACGCAA GGCAATCTTGAGTACTACTCAGGGAACTGATTCCATCAGTGCTTACTACACTAAGCTGAAGCTCTTATGGGAGGAGTTAG CCTCTTACAGACCAGTTTTCCCCTGCGATTGTGGTGCGTTGGTTCCGTTAAAGGATTTTCTTGATTCTGAGAATGTGATG TCGTTTCTCATGGGATTGAATGAGAATTATGCTTCGGTGCGCGGTCAAATCCTTCTCATGGAGCCATTACCTCCGATCAG TAAGGTTTTCTCTTTGCTAATTCAAGAGGAAAAGCAAAGGGAGGTTGGTACATCTGCTTCACCACCTCCATTAGCATTTG CAGTTGATACAAACAACACTATGCAGACCAACTCTCAGGTCTCTTCTCAAGCAAATGCAGTTCAGTATCCTTCTGGGCAA GGTTATTACAACAAGAATCAGTATCCAAAGAAGGACACACGACCTGTTTGTGCTCATTGTGGTGTTCTTGGCCACACAAA GGACAAGTGCTATAGGATAATTGGTTTTCCCCCGGGTTACAAGAAGCCTACTCAGCAGAGAAATTATCAGCAAAATACTG GTTCTGCAAACCAAGTTTCATGTCAGATGAATGATTCAGCCACTGATGAGTGCCCTCAGCTTACTATTTCTCAGTGCCAA CAGTTGATCCAGTACCTTTCCACTCATCTTGCCTCTACTTCTACTTCTTCACCCTCACAGGCATCACCATCTCTTGATGT TGCAGGTATAATTCTGTCCATTTCTTCCTTTTCTTTCTTAGATATACATTCCTGGGTAATTGATTCTGGAGCTACTTCAC ACATTTGTCACCTTAAGTCTCTTTATCTCACTTTTAAACCCTTACACAATTCATTTGTAGTACTGCCAAATTCCACTCGT GTCTCAGTGCTAGGTATAGGAAGTGTGCAAATCAATTCATCACTTGTACTGTATAATGTACTGTATATTCCTTCATTCAG ATTCAATTTACTGTCTTTGAGCTCACTGTTTAAATTCTATGAATACACTGTGACTTTCAATGCTCATACCTTCTATATTC AGGACCCCAAGTCTTTAATGACGATTGGCAAGGGTAAAGTTCATAGCGGACTCTACCTTCTTCAGAGTCAACCATTGTCT TCAAAAGCTTTGTCTCAAGATCTGTCTTCTACTTTTTCAATTCCTTCAACTGTTGCTGATTCCAAAAATACAAAAACATT AGTTCCTGTTTGTAATTTTGTTTCTCATTCATGTACTTCAGTGCCTGTTTCTATTTCTCATTGTAATTCTGTTTTGTCCA ATCCCACCTTTTGTACTTGACATACTCGTTTTGGTCATACTTCCAATAAAGTGTTCAATCTGATCAATAAAAAGTTACAT TTGTTGTCTTCTATTGATGATTCTTATCATTGTGCTGTTTGTCATTTGTCCAAGCAACATAGATTGCCTTTTGAATCTCA TCATAATTTTTCAAGTAATTGTTTTGATCTTATCCACGCTGATATTTGGGGGCCTTTTAAACAACCAACTTATCATGGTT ATTCTTATTTCTTAACTCTTGTTGATGACAAAAGTCGATTTACATGGATACATTTGTTGAAACACAAATCTGATGCTACC ATTGTCATACCACAATTCTTTGCTTTTGTGAAAACACAATTCAATGTGGTTATTAAATCTTTTAGATCAGACAATGCAAA GGAATTAGCTCTAACTGATTTCTTTGCCACACATGGTGTACACCACCAATTCTCATGTGTTGAGAGACCCCAACAAAATT CAGTAGCAGAAAGAAAGCACCAGCATCTGTTGAATGTAGCTCGAGCTTTGCTTTTCCAGTCACATGTACCCATCCGTTTC TGGGGTGATTGTATTAGCACAGCTGCTTTCATCATTAACAGATTGCCAACACCAAACTTACAAAACAAGTCACCATATGA GCTGCTCTACAACAAGCAACCAACTTACAATGATTTTAGAGTGTTTGGCACACTGTGTTATGCTTCTACATTGCCCTCCA CAAGAAACAAATTCACTCCTCGAGCAACTGCTACTGTTTTTATTGGATATCCAACGGGATACAAAGGCTACAAATTATAT GATCCACAAAGTAAGAAGGTGTTTATCTCTAGAGATGTTCAGTTTCATGAGGACATTTTTCCTTTCAAGCATCAACCTGA ACCAGATAATTGGTTGAATGATCTTGTGTATCCTCTTCCTCAACCAGAACCAACCCAATCGCAGGCATCAACACATCAAC AACCAGACCAGACACAAGGAAATGATCTTTCTAATTCACCACAAGCTCCTGCAGGACCAGCCAATAATGCAAATCAGGCT CTACAGTTCCGCAGATCAACAAGAGAACACAGGGCTCCATCTTTCTTGCAAGATTTTCATTGCTACAACATACAACATGG GTCTTCCACTGCCTACCCTTTATCACACTTTCTAGATTACAGTGCACTTGCTCCTGCGTACAAGCATTATGTGTGTCAAA TAACAACTGAAAAGGAGCCGACTACTTATGCTAAAGCTGCCATTCATGACCATTGGAGAAAGGCCATCTCAGCAGAACTT CACGCAATGGAGGAGAATAAAACCTGGAGTGTGGTTCCCTTACCCTCTGGCAGAAAAAGTGTAGGCTGCAAGTGGATTTT TAAGATCAAGTACAATGCTGATGGTTCTATAGAACGATACAAGGCACGACTTGTAGCAC
CDS sequence (LotjaGi3g1v0466200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTTGCTTCTCAGATCCACCAAGTCCAAGCTCTTCTCTTCCTCTCTTTCCAGAACCTTCTCCTCTCTCCACCGCAC CGCTCCGCCTCAGATCGGAGCAACCACCGCTACCGGTGGTGAAAACACTTCCAGGGGAAACTTGACCGGTCTTCCCAAAG ATTCCAATGACTTCAGCTCCTTGAGATTCAATGCTTATGGACTGGACGCTACTCTGCTGGCTGGAGCTAGATATGGTACT AAAGCTTGTGCTGCCAATGGTCCAATGCAAATGGGAGTCATGGCTAGAAGTTTTCAGAGAGGTGCAGGTCCTGAACCATT GGGACTGACCAGTCACAAACGTTTTATGAGCGACACCTCAAGTAAAACTACTGAGACAAAGCCTTATGGTCTACGTCCAT TGTCTCCTCATCTTCCTGTTTATCAGCCCCAACTTTCTTCGACACTTTCAATTTTCAATAGAATTGCCGGAGCTTCCCTA GCTGCTATCATTGTGGCTTTTTATATGATATATATGAAAATGGGTTTGATTAGCCTCACCTATGATTCATTCTACCAGTT TGTATTTTACTCATCAAAACTCAACCTACTCGCCATTGAGATTTCTGCCTTGGCCACAACCTATCATCTATACAGTGCAA TCCGCCATTTACTCGTATGA
Protein sequence (LotjaGi3g1v0466200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLLLRSTKSKLFSSSLSRTFSSLHRTAPPQIGATTATGGENTSRGNLTGLPKDSNDFSSLRFNAYGLDATLLAGARYGT KACAANGPMQMGVMARSFQRGAGPEPLGLTSHKRFMSDTSSKTTETKPYGLRPLSPHLPVYQPQLSSTLSIFNRIAGASL AAIIVAFYMIYMKMGLISLTYDSFYQFVFYSSKLNLLAIEISALATTYHLYSAIRHLLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 154 | 154 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 34 | 34 | - | – | |
| MobiDBLite | 24 | 53 | 30 | - | – | |
| PANTHER | 93 | 218 | 126 | 2.3E-30 | – | |
| PANTHER | 93 | 218 | 126 | 2.3E-30 | – | |
| MobiDBLite | 109 | 128 | 20 | - | – | |
| MobiDBLite | 113 | 128 | 16 | - | – | |
| Gene3D | 115 | 219 | 105 | 7.0E-19 | ||
| SUPERFAMILY | 126 | 218 | 93 | 5.56E-15 | ||
| CDD | 132 | 218 | 87 | 3.39586E-18 | – | |
| Pfam | 132 | 219 | 88 | 2.7E-12 | ||
| Phobius | 155 | 174 | 20 | - | – | |
| TMHMM | 159 | 181 | 23 | - | – | |
| Phobius | 175 | 193 | 19 | - | – | |
| Phobius | 194 | 214 | 21 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 215 | 219 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. |
Expression pattern of LotjaGi3g1v0466200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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