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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466300 |
| Transcript ID | LotjaGi3g1v0466300.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aconitate hydratase; TAIR: AT2G05710.1 aconitase 3; Swiss-Prot: sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic; TrEMBL-Plants: tr|A0A1J7GFJ2|A0A1J7GFJ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0466300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88166314..88172822) extracted from Lotus japonicus Gifu genome v1.2.
TCATATTGGCAGTGTATTTTTATTAAACTCTTAATATTATATGAGTGACAGAGGATCAGTGTCTATTTATTGTGATTAGT GCAATCAATTACACTGATGATGTGAACTTTATGGGTGAATGACAGAAAAGTTACCATACTCCATAAGGATTCTCCTTGAG TCTGCCATTCGTAATTGTGACAATTTCCAAGTCACTAAAGAAGATGTTGAGAAGATTATTGACTGGGAAAAGACTTCTTC TAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGAGTTCTCTTGCAGGTACCTTTGTCAACCTCTGGAATCTGGACACAGT GAAATAGTTAGTTATATTAGAATGAGTGGTGCTAAGTACTATGTTTTTTTTCCTTTTGAACTTTTTACATTTCCTCAGGA TTTTACTGGAGTTCCAGCTGTTGTTGACCTGGCTTGCATGCGAGACGCTATGAATAAGCTTGGCAGTGATTCAAATAAGA TCAATCCTCTGGTATTCATCTTTCTTGTCACTTGCATGAGTTTTTGTTCGTTATGAATGATTGAATTCATTGATAGCAGT CACCAACGAGGTTTCTAATTTTTGACCATACATGAAACATCATTGAGATATGTGGGCGAACTTTATATTACTTCAGTAAT ATTACATCATTAAACAGTATATAAAATATAGAATCTCATGTATTACTTTAACCAAAAAGTTAGCTTTGTTCTGTATTTTT GACATACCCAGGTTAACCATTTTGGTAGTCGGTACTATATAGCTGCCAAAAGTTCTGCAATTGATATAAGACTGAAATAG GGAACAGTATCTGAAAACTATTTGCCAATATGTTTATCTACCCTAGTTTATTGATATAGCTTAAGCTTTTAATGGAATTT GACAATTTTAATATATGGGTCTGAAGTACTGTTCAAGTTAGAACTAGTTCATACTGTTATCAAATTGTAATTATTATACT TAAATTTGATTAGTTCAATGACAAACATTGTTTCATGAATAACTTTTGAAATTTTAGATTGTATAATAGTGAGAGAATAT GATTCTGTTAGATGAGCTAAATCGGATTATACCTGATTACTGTGTGGGATTTATTTTAAATTAGGTTCGGCATCAAAACT GGATTTTCAGAGGTTCAGTTACAACCAAATAACCACGGGAAAATTTGATAACTAAATCCATTCTGCATGATTATGTGGTT TTTGAAGTTTGAAAAACACTCATATATTTTCCTCGTATTTTATGTTTGTTAGAGGTGGTTCTGAGTTGTAATTGTTGGCA GGTACCTGTTGATCTTGTTGTTGATCATTCAGTTCAAGTTGATGTAGCAAGGTCAGAAAATGCGGTGCAGGCTAATATGG AACTTGAGTTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGATCAACTGCATTTCATAACATGCTTGTTGTT CCTCCTGGTTCTGGAATAGTACATCAGGTAGGTTTGGAAGCAGACATGCAAAATGACTTCCTTTCATTTACATTCTTTCT ATTGGTAATATTGGGGACTTATGATTTTATGTCTTGAATTCTAGGTCAATCTTGAATATCTTGGGCGGGTTGTTTTCAAC AACGAGGGCTTACTCTATCCTGACAGTGTAGTTGGGACCGATTCACATACAACTATGATAGATGGGCTCGGTGTTGCTGG ATGGGGTGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGCCAGGTACATTGCGTTCTGATCTTGATATGCGCACTTT ATGAAACACCGATGATTAATGAATATTGATGGCATCTTTAACTCTTTTGATGTGTTTGTTAATTTGCTTTATCATGAAAT AAGCATGTGGAGTAGTTTAGCTACAGTAACGGTTCTAATGCTGTTTTATGTGATACCTACAGCCTATGAGCATGGTTTTA CCCGGTGTTGTTGGGTTCAAGTTAGCTGGAAAACTGCGCAATGGTGTTACAGCAACTGATTTGGTTCTAACTGTGACACA AATTCTTAGAAAGCACGGCGTTGTCGGGAAATTTGTTGAGTTTCATGGTATCTGAATTTTCTCAACTCTTGAGGCCAATG GTCAAATATTTTTTTTGCCCTTTTTCAATGTAGGCTGAGTGGCGTTGTTAATTAATATTTTTCATGTTTTCATTGTGTAG GTGATGGTGTGGGTAAATTATCTTTAGCTGACAGAGCCACTATTGCTAATATGGCTCCTGAATATGGTGCCACCATGGGC TTCTTCCCTGTGGATCATGTTACTCTACAATATCTCAAGCTAACTGGAAGAAGTGATGAGACTGTAAGTGCTGTTTGTCA ACTAATTTATTATTTGCTATGAAATGCTTATAGTATTGTTTGACGTTCATTTTGTCTGAAACAGGTGACCATGATAGAGT CTTATCTCAGGGCAAACAAACTGTTTGTTGACTATAATGAGGTAATGTTAATATATCGCTGTTGCCCTATATGCTCTTTT TTAACCAAATTAAATGTGTATACATATGTTTGGGGTATATAATGCTAATTTATATTTTCTATAAATTCAGCCACAACAAG AACGAGTTTATTCATCATATCTTGAATTGAACCTTTCCGATGTTGAACCATGTATCTCAGGACCTAAGAGGTAAGATTAT ATTCTCCTTCACATGTTGTCCTCTATGTTAACGGTGGTTTAGTTTCAATTTCTGTCCTATTATCTATCTGATAATTTATA CTGAATGATATTCTTTCCAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATGCTTGTCTTGATAA CAAAGTTGGATTCAAGGTTCGTGATATAACATGAATTATCTGTTCATAATTACTTTTAAACAAAACTGCTGTATCCTGTC AGTTGGTTGTTTTTGTAATGGAATTCTAATTCGGTTTAGTTTCGCCTCACTTCCAGTATTTGTCTGCAGTAATTGACCAA CATATATTAGTGCTTCAGTGTTCATAGTTGTTTACCTGGATGGTCATAGTTAGAATTGTTTCATATGGCAAGATAGAACC ATCAATAATCAATATCTTTTTACTATGTTCATTCGGCTTGCCTATTGGGTGTCATTTACAATTTTTGTGAAGAATGTACA AGGTCCATTTTTATAATTGCTCTAGTTCTGTTTGCCTGTTTAATCATAATCAACTTACTCAATGGCTAAAATGACGATGC TATATTACTGATATAGTTGATCTTCATCAACATCAGCTCTGTCATTCACCTGTTAATTATATTCAGCAATTAACAGAAGC AATGATGTCAAAGGCTCAATTTTTTTGTATATGCTTGCTTTCTTGTGAGTATATGCCTGGAAGATGCATGTTAATGAACT GAGGGGGGGGGGGATCTCACATTAAGAACCTTATTCTGCATTGCGGTTGAATATGCAGAAGTTGCATCATCTATGCTTCA TGGAATGTTGCCTGATGAGAACCCTAGATTAATATAAGCTACTATATTTTGCTAAATATTTTATCTAAATACAGGGATTT GCTATACCAAAAGAAACACAAGGAAAAGTTGCAAAGTTTGATTTCCATGGACAGCCAGCGGAGCTCAAGCATGGCAGTGT TGTGATTGCTGCAATAACAAGCTGTACGAATACATCTAACCCAAGTGTTATGCTTGGAGCTGGTCTTGTTGCGAAAAAGG CTCATGAGCTTGGTTTGAAGGTTAGGAACTAATATATTAATTTAAGAAACTGTAACACCGCTACTTCTTTCTTTTTTCAG ATTCTAATTTTTGCTGTTTATTATATTATGCCAGGTCAAACCTTGGGTTAAAACAAGTCTTGCTCCTGGTTCAGGAGTTG TTACGAAATATCTACTCCAGAGGTATTTTGAGCTTCTTATTAGAAAACTGTTACTTTATTTTGTACTATCATGTAGTCAC TTCCCCTTTGCTCAATTTAGGGAAAATGCATTCTGATTTTGTATTTCTGTATACTTTATGGCAGTGGGCTGCAAAGTTAT CTCAATGAACAAGGTTTTAATATTGTTGGATTTGGCTGCACAACATGTATTGGCAATTCAGGCGATCTGGATGAATCTGT TGCTTCTGCTATCTCAGAAAATGGTCATATTTCATAGCAAAATACTACAATTTTGAACTAAAGCTGATTTTTGTGCAAAT CTCAGCCTTCTCTTACAATTTTTTCTTGTTTCTAAGTTATATATTCTTCTAGACATAATTTTTTGTTTTGTGATGCAGAC ATTGTAGCTGCTGCTGTGTTGTCTGGAAACCGTAATTTTGAGGGCCGTGTCCATGCCCTGACAAGAGCTAACTACCTTGC CTCTCCTCCTCTTGTTGTCGCTTATGCTCTTGCTGGCACGGTATGCATGTCTAATTCATATTTCTAATATGTATATACTT TCGATTTGGTTCTTTCTTCTATAGTTTCATCTGAACTGAATCTCTTTTTGTAAAAAGTAATAGTTATCTTACTCATATGT TGGACATAGTCAAAGTAGACAAATCTTAAAATTATTAGAGGCTAATCACAAGCTTTGATATTGGCCGCTAGCTACATAAT CTACATCATTTTGGTACGTTCGCATGAATCAAAAGCCTTAAGCTATGTGTAATACTGTAATGGATTTTGATTCAAGCAGG AATCAGTAGTCAAACGGATCTTACGTTTCATTTCTTTTTGTGTCAACTTTCTCATACAAATAATAACCTAATTCAAACTT TTTGGGTTCTTACATCCAGGACTCTGGATATGGAGTCAGGTATTGCATGCATGTGCTTAGAAAACATAAAATATTGGTCT ATTTTCGTGCAATGAAAAAGTATTTGACTTTGGAGGCTGTACTTATTATTCTTTTTCTGATCGAGAATGCGACATCATAG ACTAATATTATTGTGAATGACCTACCTGACTATGGAGTAGGCTTTATTTAGATCATTTACTTGGTAGGAATTAGGATGCA CATTTTAAAAAACATCAACATCCTGAAGCTTGTCAGACCTTCATCAAATACCTTCTGGTTGAATTTCCAGGTTGACATTG ACTTTGAGAAGGAGCCAATTGGGACAGGGAAGGATGGCAAGAATGTCTACTTGAGGGATATCTGGCCATCCACTGAAGAA ATTGCAGAGGTAAATGATGTCTAATCTTCTCATTTTATGAAATGTAGTCTAATTATTCAAAAGTATAAGGCAAAATTAAC TTTGGGTGACTTCATTTTTAGGCTGTTCAATCTAGTGTGTTGCCTGCCATGTTCCGAAGCACATATGAGGCTATTACCAA GGGCAACCCCATGTGGAATCAATTACAAGTTCCTGCTGACACTCTCTACTCATGGGACTCCAACTCAACATATATTCATG AACCCCCATACTTCAAGAATATGACGTTGGATCCTCCTGGAGCTCATGGTGTGAAAGATGCCTTTTGCCTGCTGAACTTT GGTGACAGTATAACTACTGATCATATTTCTCCAGCTGGAAGCATTCAGAAGGATAGTCCTGCTGCTAAATACCTCCTAGA GCGTGGGGTAGAGCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAATGATGAGGTGATGGCAAGAGGAACTTTTG CCAATATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCCAAGACAGTGCATGTTCCATCTGGGGAGAAGCTT TATGTGTTTGATGCAGCAATGGTGAGTTATATCCTACTCAAGTATGACACGACTCAAAAAAGTGAAATTAATGAGTGCTA CTGTTCAAAATAATGTGATATGGAATCATCAATTTTAGCTAATATCAAGTTTCTAAATCCTGTGATTGTTCTCTTTTCTC AGAAATACAGGGCTTCTGGCCAACCCACCATTGTGCTCGCTGGAGCTGAATATGGCAGTGGAAGTTCTAGAGATTGGGCG GCCAAGGGTCCAATGTTATTGGTTAGTTCCTTTATAACAAGTTTATATATGTTGGCTTGTGATGGAGTTTTTTTATTTGA CTTTCTTAAAATATAAAGGTTAATATTCCCGGTGACTTATGGCACTTACTTTTCAATAGGGAGTCAAAGCTGTCATAGCT AAAAGTTTCGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCCCTTTGTTTCAAATCCGGGGAGGATGC GGACACATTGGGATTGACTGGTCATGAACGTTATACGATTGACCTTCCTAGTGAGATCAGGCCTGGCCAAGATGTGACGG TCACAACTGATAATGGAAAATCTTTCACCTGCAAATTACGCTTTGATACTGAGGTAATTTGACCTTTTATCTGGTTTATG TTTGTTTCTTTTCTTAGAGCTACTGTTGTCAGGGTTTGTGGGAGGATGATAGCTCAGCTTGCTTCATTATAACATCTTTT TAACCCTTGATTGGTGCGTAATATACTGTTGTATTTTCAGGTGGAACTTGCTTACTTCAACCATGGAGGCATACTTCCAT ATGTCATACGGAGCCTAGCTCAGCAGTGA
CDS sequence (LotjaGi3g1v0466300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGAAAAGTTACCATACTCCATAAGGATTCTCCTTGAGTCTGCCATTCGTAATTGTGACAATTTCCAAGTCACTAA AGAAGATGTTGAGAAGATTATTGACTGGGAAAAGACTTCTTCTAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGAGTTC TCTTGCAGGATTTTACTGGAGTTCCAGCTGTTGTTGACCTGGCTTGCATGCGAGACGCTATGAATAAGCTTGGCAGTGAT TCAAATAAGATCAATCCTCTGGTACCTGTTGATCTTGTTGTTGATCATTCAGTTCAAGTTGATGTAGCAAGGTCAGAAAA TGCGGTGCAGGCTAATATGGAACTTGAGTTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGATCAACTGCAT TTCATAACATGCTTGTTGTTCCTCCTGGTTCTGGAATAGTACATCAGGTCAATCTTGAATATCTTGGGCGGGTTGTTTTC AACAACGAGGGCTTACTCTATCCTGACAGTGTAGTTGGGACCGATTCACATACAACTATGATAGATGGGCTCGGTGTTGC TGGATGGGGTGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGCCAGCCTATGAGCATGGTTTTACCCGGTGTTGTTG GGTTCAAGTTAGCTGGAAAACTGCGCAATGGTGTTACAGCAACTGATTTGGTTCTAACTGTGACACAAATTCTTAGAAAG CACGGCGTTGTCGGGAAATTTGTTGAGTTTCATGGTGATGGTGTGGGTAAATTATCTTTAGCTGACAGAGCCACTATTGC TAATATGGCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACTCTACAATATCTCAAGCTAACTG GAAGAAGTGATGAGACTGTGACCATGATAGAGTCTTATCTCAGGGCAAACAAACTGTTTGTTGACTATAATGAGCCACAA CAAGAACGAGTTTATTCATCATATCTTGAATTGAACCTTTCCGATGTTGAACCATGTATCTCAGGACCTAAGAGACCTCA TGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATGCTTGTCTTGATAACAAAGTTGGATTCAAGGGATTTGCTA TACCAAAAGAAACACAAGGAAAAGTTGCAAAGTTTGATTTCCATGGACAGCCAGCGGAGCTCAAGCATGGCAGTGTTGTG ATTGCTGCAATAACAAGCTGTACGAATACATCTAACCCAAGTGTTATGCTTGGAGCTGGTCTTGTTGCGAAAAAGGCTCA TGAGCTTGGTTTGAAGGTCAAACCTTGGGTTAAAACAAGTCTTGCTCCTGGTTCAGGAGTTGTTACGAAATATCTACTCC AGAGTGGGCTGCAAAGTTATCTCAATGAACAAGGTTTTAATATTGTTGGATTTGGCTGCACAACATGTATTGGCAATTCA GGCGATCTGGATGAATCTGTTGCTTCTGCTATCTCAGAAAATGACATTGTAGCTGCTGCTGTGTTGTCTGGAAACCGTAA TTTTGAGGGCCGTGTCCATGCCCTGACAAGAGCTAACTACCTTGCCTCTCCTCCTCTTGTTGTCGCTTATGCTCTTGCTG GCACGGTTGACATTGACTTTGAGAAGGAGCCAATTGGGACAGGGAAGGATGGCAAGAATGTCTACTTGAGGGATATCTGG CCATCCACTGAAGAAATTGCAGAGGCTGTTCAATCTAGTGTGTTGCCTGCCATGTTCCGAAGCACATATGAGGCTATTAC CAAGGGCAACCCCATGTGGAATCAATTACAAGTTCCTGCTGACACTCTCTACTCATGGGACTCCAACTCAACATATATTC ATGAACCCCCATACTTCAAGAATATGACGTTGGATCCTCCTGGAGCTCATGGTGTGAAAGATGCCTTTTGCCTGCTGAAC TTTGGTGACAGTATAACTACTGATCATATTTCTCCAGCTGGAAGCATTCAGAAGGATAGTCCTGCTGCTAAATACCTCCT AGAGCGTGGGGTAGAGCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAATGATGAGGTGATGGCAAGAGGAACTT TTGCCAATATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCCAAGACAGTGCATGTTCCATCTGGGGAGAAG CTTTATGTGTTTGATGCAGCAATGAAATACAGGGCTTCTGGCCAACCCACCATTGTGCTCGCTGGAGCTGAATATGGCAG TGGAAGTTCTAGAGATTGGGCGGCCAAGGGTCCAATGTTATTGGGAGTCAAAGCTGTCATAGCTAAAAGTTTCGAGAGAA TTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCCCTTTGTTTCAAATCCGGGGAGGATGCGGACACATTGGGATTG ACTGGTCATGAACGTTATACGATTGACCTTCCTAGTGAGATCAGGCCTGGCCAAGATGTGACGGTCACAACTGATAATGG AAAATCTTTCACCTGCAAATTACGCTTTGATACTGAGGTGGAACTTGCTTACTTCAACCATGGAGGCATACTTCCATATG TCATACGGAGCCTAGCTCAGCAGTGA
Protein sequence (LotjaGi3g1v0466300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTSSKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSD SNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVF NNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLAGKLRNGVTATDLVLTVTQILRK HGVVGKFVEFHGDGVGKLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVTMIESYLRANKLFVDYNEPQ QERVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHACLDNKVGFKGFAIPKETQGKVAKFDFHGQPAELKHGSVV IAAITSCTNTSNPSVMLGAGLVAKKAHELGLKVKPWVKTSLAPGSGVVTKYLLQSGLQSYLNEQGFNIVGFGCTTCIGNS GDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVYLRDIW PSTEEIAEAVQSSVLPAMFRSTYEAITKGNPMWNQLQVPADTLYSWDSNSTYIHEPPYFKNMTLDPPGAHGVKDAFCLLN FGDSITTDHISPAGSIQKDSPAAKYLLERGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHVPSGEK LYVFDAAMKYRASGQPTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGL TGHERYTIDLPSEIRPGQDVTVTTDNGKSFTCKLRFDTEVELAYFNHGGILPYVIRSLAQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 338 | 338 | 1.3E-177 | – | |
| SUPERFAMILY | 3 | 599 | 597 | 5.36E-231 | ||
| PANTHER | 3 | 861 | 859 | 0.0 | – | |
| TIGRFAM | 3 | 857 | 855 | 0.0 | ||
| PANTHER | 3 | 861 | 859 | 0.0 | ||
| Pfam | 31 | 534 | 504 | 1.8E-182 | ||
| CDD | 52 | 536 | 485 | 0.0 | – | |
| PRINTS | 113 | 126 | 14 | 3.0E-46 | ||
| PRINTS | 137 | 145 | 9 | 3.0E-46 | ||
| PRINTS | 166 | 179 | 14 | 3.0E-46 | ||
| PRINTS | 180 | 195 | 16 | 3.0E-46 | ||
| PRINTS | 242 | 255 | 14 | 3.0E-46 | ||
| PRINTS | 256 | 269 | 14 | 3.0E-46 | ||
| PRINTS | 338 | 352 | 15 | 3.0E-46 | ||
| Gene3D | 339 | 562 | 224 | 5.9E-114 | ||
| ProSitePatterns | 399 | 415 | 17 | - | ||
| PRINTS | 403 | 414 | 12 | 3.0E-46 | ||
| PRINTS | 465 | 478 | 14 | 3.0E-46 | ||
| ProSitePatterns | 465 | 478 | 14 | - | ||
| Gene3D | 563 | 624 | 62 | 6.5E-27 | – | |
| SUPERFAMILY | 603 | 857 | 255 | 6.67E-88 | – | |
| Gene3D | 626 | 860 | 235 | 1.6E-115 | ||
| CDD | 640 | 810 | 171 | 1.45591E-113 | – | |
| Pfam | 663 | 790 | 128 | 4.9E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0466300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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