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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466300 |
| Transcript ID | LotjaGi3g1v0466300.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aconitate hydratase; TAIR: AT2G05710.1 aconitase 3; Swiss-Prot: sp|P49608|ACOC_CUCMA Aconitate hydratase, cytoplasmic; TrEMBL-Plants: tr|G7JDJ4|G7JDJ4_MEDTR Aconitate hydratase; Found in the gene: LotjaGi3g1v0466300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88166998..88173731) extracted from Lotus japonicus Gifu genome v1.2.
CATCCTCCTCCTCGCGCTTCCTTCTCCCCCGCGCCTTCCCGATCCTTCATCTCCTCGCTCCCCCGCTGGAGCCACCGCCT CCACTGCGGTTCTCCCTCCACTCTTCGCCCTCAGATCAGAGCCGTCGCTCCTGTTCTCGAACGCTTCCACCGCAAGATCG CTACCATGGGTAACCACTTCATCACTGTTCCTTTCGTTATTTTTTTTAATTTGATCGCGATTTCACGTCTTCGATTTCAA TTTTTGAGGAATTTTTATTGCTTTTTTGTTGTTGTTGTTGTTGACCTGTTCCAGCTAGTGAAAATCCTTTCAAGGGAAAC TTGACTAGCCTTCCGAAGCCGGGTGGCGGCGAGTTTGGAAAATTCTACAGTCTTCCGTCGCTCAACGATCCAAGAGTTGG TAATTTGCTAGCCTGATTCATTTCATGATTTAAACCATGTCATTTGTTATACTAAATGCAACTGAAGTCTGTGATGTTGG TAATTTCATATTAATATTGGAATTTGATGAGCATACACTTACATGTGTCCTCTCTGTTCAAGAATTTGATTAGGGTCTCA CATAGCCAGTATGCTTTATCTCATGCCCATTTTTGTCTATGGTTTGATATTTTGATGTTTTAGGCATATAGGAACCGTGT GATCCTGTGGTTGAACTCTATCAGTGAGGATAGTGTAGGTGGTCCTGCGGAAAAATAGCTTGGTGCCAGGATGAAAAGAT TACCATATCTCGTTCTTGTTACTTTTTCGAGTTGTAGAAAATAATAAGAATGGGGAATGAATAAAATTGCACACATGTCT AGTACTCTAGTCATACTTCAATATTCTGCCCTTTTGTTTTTTCCAGCTGCAATTCCATTGTGGTGTTATAAGATGATGAA ATATGATTGGATATTTTCGTAAAACCTGTTCATATTGGCAGTGTATTTTTATTAAACTCTTAATATTATATGAGTGACAG AGGATCAGTGTCTATTTATTGTGATTAGTGCAATCAATTACACTGATGATGTGAACTTTATGGGTGAATGACAGAAAAGT TACCATACTCCATAAGGATTCTCCTTGAGTCTGCCATTCGTAATTGTGACAATTTCCAAGTCACTAAAGAAGATGTTGAG AAGATTATTGACTGGGAAAAGACTTCTTCTAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGAGTTCTCTTGCAGGTACC TTTGTCAACCTCTGGAATCTGGACACAGTGAAATAGTTAGTTATATTAGAATGAGTGGTGCTAAGTACTATGTTTTTTTT CCTTTTGAACTTTTTACATTTCCTCAGGATTTTACTGGAGTTCCAGCTGTTGTTGACCTGGCTTGCATGCGAGACGCTAT GAATAAGCTTGGCAGTGATTCAAATAAGATCAATCCTCTGGTATTCATCTTTCTTGTCACTTGCATGAGTTTTTGTTCGT TATGAATGATTGAATTCATTGATAGCAGTCACCAACGAGGTTTCTAATTTTTGACCATACATGAAACATCATTGAGATAT GTGGGCGAACTTTATATTACTTCAGTAATATTACATCATTAAACAGTATATAAAATATAGAATCTCATGTATTACTTTAA CCAAAAAGTTAGCTTTGTTCTGTATTTTTGACATACCCAGGTTAACCATTTTGGTAGTCGGTACTATATAGCTGCCAAAA GTTCTGCAATTGATATAAGACTGAAATAGGGAACAGTATCTGAAAACTATTTGCCAATATGTTTATCTACCCTAGTTTAT TGATATAGCTTAAGCTTTTAATGGAATTTGACAATTTTAATATATGGGTCTGAAGTACTGTTCAAGTTAGAACTAGTTCA TACTGTTATCAAATTGTAATTATTATACTTAAATTTGATTAGTTCAATGACAAACATTGTTTCATGAATAACTTTTGAAA TTTTAGATTGTATAATAGTGAGAGAATATGATTCTGTTAGATGAGCTAAATCGGATTATACCTGATTACTGTGTGGGATT TATTTTAAATTAGGTTCGGCATCAAAACTGGATTTTCAGAGGTTCAGTTACAACCAAATAACCACGGGAAAATTTGATAA CTAAATCCATTCTGCATGATTATGTGGTTTTTGAAGTTTGAAAAACACTCATATATTTTCCTCGTATTTTATGTTTGTTA GAGGTGGTTCTGAGTTGTAATTGTTGGCAGGTACCTGTTGATCTTGTTGTTGATCATTCAGTTCAAGTTGATGTAGCAAG GTCAGAAAATGCGGTGCAGGCTAATATGGAACTTGAGTTCCAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGAT CAACTGCATTTCATAACATGCTTGTTGTTCCTCCTGGTTCTGGAATAGTACATCAGGTAGGTTTGGAAGCAGACATGCAA AATGACTTCCTTTCATTTACATTCTTTCTATTGGTAATATTGGGGACTTATGATTTTATGTCTTGAATTCTAGGTCAATC TTGAATATCTTGGGCGGGTTGTTTTCAACAACGAGGGCTTACTCTATCCTGACAGTGTAGTTGGGACCGATTCACATACA ACTATGATAGATGGGCTCGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGCCAGGTACA TTGCGTTCTGATCTTGATATGCGCACTTTATGAAACACCGATGATTAATGAATATTGATGGCATCTTTAACTCTTTTGAT GTGTTTGTTAATTTGCTTTATCATGAAATAAGCATGTGGAGTAGTTTAGCTACAGTAACGGTTCTAATGCTGTTTTATGT GATACCTACAGCCTATGAGCATGGTTTTACCCGGTGTTGTTGGGTTCAAGTTAGCTGGAAAACTGCGCAATGGTGTTACA GCAACTGATTTGGTTCTAACTGTGACACAAATTCTTAGAAAGCACGGCGTTGTCGGGAAATTTGTTGAGTTTCATGGTAT CTGAATTTTCTCAACTCTTGAGGCCAATGGTCAAATATTTTTTTTGCCCTTTTTCAATGTAGGCTGAGTGGCGTTGTTAA TTAATATTTTTCATGTTTTCATTGTGTAGGTGATGGTGTGGGTAAATTATCTTTAGCTGACAGAGCCACTATTGCTAATA TGGCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACTCTACAATATCTCAAGCTAACTGGAAGA AGTGATGAGACTGTAAGTGCTGTTTGTCAACTAATTTATTATTTGCTATGAAATGCTTATAGTATTGTTTGACGTTCATT TTGTCTGAAACAGGTGACCATGATAGAGTCTTATCTCAGGGCAAACAAACTGTTTGTTGACTATAATGAGGTAATGTTAA TATATCGCTGTTGCCCTATATGCTCTTTTTTAACCAAATTAAATGTGTATACATATGTTTGGGGTATATAATGCTAATTT ATATTTTCTATAAATTCAGCCACAACAAGAACGAGTTTATTCATCATATCTTGAATTGAACCTTTCCGATGTTGAACCAT GTATCTCAGGACCTAAGAGGTAAGATTATATTCTCCTTCACATGTTGTCCTCTATGTTAACGGTGGTTTAGTTTCAATTT CTGTCCTATTATCTATCTGATAATTTATACTGAATGATATTCTTTCCAGACCTCATGATCGGGTGCCTTTGAAAGAAATG AAGGCTGACTGGCATGCTTGTCTTGATAACAAAGTTGGATTCAAGGTTCGTGATATAACATGAATTATCTGTTCATAATT ACTTTTAAACAAAACTGCTGTATCCTGTCAGTTGGTTGTTTTTGTAATGGAATTCTAATTCGGTTTAGTTTCGCCTCACT TCCAGTATTTGTCTGCAGTAATTGACCAACATATATTAGTGCTTCAGTGTTCATAGTTGTTTACCTGGATGGTCATAGTT AGAATTGTTTCATATGGCAAGATAGAACCATCAATAATCAATATCTTTTTACTATGTTCATTCGGCTTGCCTATTGGGTG TCATTTACAATTTTTGTGAAGAATGTACAAGGTCCATTTTTATAATTGCTCTAGTTCTGTTTGCCTGTTTAATCATAATC AACTTACTCAATGGCTAAAATGACGATGCTATATTACTGATATAGTTGATCTTCATCAACATCAGCTCTGTCATTCACCT GTTAATTATATTCAGCAATTAACAGAAGCAATGATGTCAAAGGCTCAATTTTTTTGTATATGCTTGCTTTCTTGTGAGTA TATGCCTGGAAGATGCATGTTAATGAACTGAGGGGGGGGGGGATCTCACATTAAGAACCTTATTCTGCATTGCGGTTGAA TATGCAGAAGTTGCATCATCTATGCTTCATGGAATGTTGCCTGATGAGAACCCTAGATTAATATAAGCTACTATATTTTG CTAAATATTTTATCTAAATACAGGGATTTGCTATACCAAAAGAAACACAAGGAAAAGTTGCAAAGTTTGATTTCCATGGA CAGCCAGCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATAACAAGCTGTACGAATACATCTAACCCAAGTGTTAT GCTTGGAGCTGGTCTTGTTGCGAAAAAGGCTCATGAGCTTGGTTTGAAGGTTAGGAACTAATATATTAATTTAAGAAACT GTAACACCGCTACTTCTTTCTTTTTTCAGATTCTAATTTTTGCTGTTTATTATATTATGCCAGGTCAAACCTTGGGTTAA AACAAGTCTTGCTCCTGGTTCAGGAGTTGTTACGAAATATCTACTCCAGAGGTATTTTGAGCTTCTTATTAGAAAACTGT TACTTTATTTTGTACTATCATGTAGTCACTTCCCCTTTGCTCAATTTAGGGAAAATGCATTCTGATTTTGTATTTCTGTA TACTTTATGGCAGTGGGCTGCAAAGTTATCTCAATGAACAAGGTTTTAATATTGTTGGATTTGGCTGCACAACATGTATT GGCAATTCAGGCGATCTGGATGAATCTGTTGCTTCTGCTATCTCAGAAAATGGTCATATTTCATAGCAAAATACTACAAT TTTGAACTAAAGCTGATTTTTGTGCAAATCTCAGCCTTCTCTTACAATTTTTTCTTGTTTCTAAGTTATATATTCTTCTA GACATAATTTTTTGTTTTGTGATGCAGACATTGTAGCTGCTGCTGTGTTGTCTGGAAACCGTAATTTTGAGGGCCGTGTC CATGCCCTGACAAGAGCTAACTACCTTGCCTCTCCTCCTCTTGTTGTCGCTTATGCTCTTGCTGGCACGGTATGCATGTC TAATTCATATTTCTAATATGTATATACTTTCGATTTGGTTCTTTCTTCTATAGTTTCATCTGAACTGAATCTCTTTTTGT AAAAAGTAATAGTTATCTTACTCATATGTTGGACATAGTCAAAGTAGACAAATCTTAAAATTATTAGAGGCTAATCACAA GCTTTGATATTGGCCGCTAGCTACATAATCTACATCATTTTGGTACGTTCGCATGAATCAAAAGCCTTAAGCTATGTGTA ATACTGTAATGGATTTTGATTCAAGCAGGAATCAGTAGTCAAACGGATCTTACGTTTCATTTCTTTTTGTGTCAACTTTC TCATACAAATAATAACCTAATTCAAACTTTTTGGGTTCTTACATCCAGGACTCTGGATATGGAGTCAGGTATTGCATGCA TGTGCTTAGAAAACATAAAATATTGGTCTATTTTCGTGCAATGAAAAAGTATTTGACTTTGGAGGCTGTACTTATTATTC TTTTTCTGATCGAGAATGCGACATCATAGACTAATATTATTGTGAATGACCTACCTGACTATGGAGTAGGCTTTATTTAG ATCATTTACTTGGTAGGAATTAGGATGCACATTTTAAAAAACATCAACATCCTGAAGCTTGTCAGACCTTCATCAAATAC CTTCTGGTTGAATTTCCAGGTTGACATTGACTTTGAGAAGGAGCCAATTGGGACAGGGAAGGATGGCAAGAATGTCTACT TGAGGGATATCTGGCCATCCACTGAAGAAATTGCAGAGGTAAATGATGTCTAATCTTCTCATTTTATGAAATGTAGTCTA ATTATTCAAAAGTATAAGGCAAAATTAACTTTGGGTGACTTCATTTTTAGGCTGTTCAATCTAGTGTGTTGCCTGCCATG TTCCGAAGCACATATGAGGCTATTACCAAGGGCAACCCCATGTGGAATCAATTACAAGTTCCTGCTGACACTCTCTACTC ATGGGACTCCAACTCAACATATATTCATGAACCCCCATACTTCAAGAATATGACGTTGGATCCTCCTGGAGCTCATGGTG TGAAAGATGCCTTTTGCCTGCTGAACTTTGGTGACAGTATAACTACTGATCATATTTCTCCAGCTGGAAGCATTCAGAAG GATAGTCCTGCTGCTAAATACCTCCTAGAGCGTGGGGTAGAGCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAA TGATGAGGTGATGGCAAGAGGAACTTTTGCCAATATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCCAAGA CAGTGCATGTTCCATCTGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGGTGAGTTATATCCTACTCAAGTATGACACG ACTCAAAAAAGTGAAATTAATGAGTGCTACTGTTCAAAATAATGTGATATGGAATCATCAATTTTAGCTAATATCAAGTT TCTAAATCCTGTGA
CDS sequence (LotjaGi3g1v0466300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGTGAAAATCCTTTCAAGGGAAACTTGACTAGCCTTCCGAAGCCGGGTGGCGGCGAGTTTGGAAAATTCTACAG TCTTCCGTCGCTCAACGATCCAAGAGTTGAAAAGTTACCATACTCCATAAGGATTCTCCTTGAGTCTGCCATTCGTAATT GTGACAATTTCCAAGTCACTAAAGAAGATGTTGAGAAGATTATTGACTGGGAAAAGACTTCTTCTAAGCAAGTTGAGATT CCTTTCAAGCCTGCTCGAGTTCTCTTGCAGGATTTTACTGGAGTTCCAGCTGTTGTTGACCTGGCTTGCATGCGAGACGC TATGAATAAGCTTGGCAGTGATTCAAATAAGATCAATCCTCTGGTACCTGTTGATCTTGTTGTTGATCATTCAGTTCAAG TTGATGTAGCAAGGTCAGAAAATGCGGTGCAGGCTAATATGGAACTTGAGTTCCAGAGAAACAAGGAGAGATTTGCTTTT CTTAAATGGGGATCAACTGCATTTCATAACATGCTTGTTGTTCCTCCTGGTTCTGGAATAGTACATCAGGTCAATCTTGA ATATCTTGGGCGGGTTGTTTTCAACAACGAGGGCTTACTCTATCCTGACAGTGTAGTTGGGACCGATTCACATACAACTA TGATAGATGGGCTCGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCCGAGGCAGCAATGCTTGGCCAGCCTATGAGC ATGGTTTTACCCGGTGTTGTTGGGTTCAAGTTAGCTGGAAAACTGCGCAATGGTGTTACAGCAACTGATTTGGTTCTAAC TGTGACACAAATTCTTAGAAAGCACGGCGTTGTCGGGAAATTTGTTGAGTTTCATGGTGATGGTGTGGGTAAATTATCTT TAGCTGACAGAGCCACTATTGCTAATATGGCTCCTGAATATGGTGCCACCATGGGCTTCTTCCCTGTGGATCATGTTACT CTACAATATCTCAAGCTAACTGGAAGAAGTGATGAGACTGTGACCATGATAGAGTCTTATCTCAGGGCAAACAAACTGTT TGTTGACTATAATGAGCCACAACAAGAACGAGTTTATTCATCATATCTTGAATTGAACCTTTCCGATGTTGAACCATGTA TCTCAGGACCTAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATGCTTGTCTTGATAACAAA GTTGGATTCAAGGGATTTGCTATACCAAAAGAAACACAAGGAAAAGTTGCAAAGTTTGATTTCCATGGACAGCCAGCGGA GCTCAAGCATGGCAGTGTTGTGATTGCTGCAATAACAAGCTGTACGAATACATCTAACCCAAGTGTTATGCTTGGAGCTG GTCTTGTTGCGAAAAAGGCTCATGAGCTTGGTTTGAAGGTCAAACCTTGGGTTAAAACAAGTCTTGCTCCTGGTTCAGGA GTTGTTACGAAATATCTACTCCAGAGTGGGCTGCAAAGTTATCTCAATGAACAAGGTTTTAATATTGTTGGATTTGGCTG CACAACATGTATTGGCAATTCAGGCGATCTGGATGAATCTGTTGCTTCTGCTATCTCAGAAAATGACATTGTAGCTGCTG CTGTGTTGTCTGGAAACCGTAATTTTGAGGGCCGTGTCCATGCCCTGACAAGAGCTAACTACCTTGCCTCTCCTCCTCTT GTTGTCGCTTATGCTCTTGCTGGCACGGTTGACATTGACTTTGAGAAGGAGCCAATTGGGACAGGGAAGGATGGCAAGAA TGTCTACTTGAGGGATATCTGGCCATCCACTGAAGAAATTGCAGAGGCTGTTCAATCTAGTGTGTTGCCTGCCATGTTCC GAAGCACATATGAGGCTATTACCAAGGGCAACCCCATGTGGAATCAATTACAAGTTCCTGCTGACACTCTCTACTCATGG GACTCCAACTCAACATATATTCATGAACCCCCATACTTCAAGAATATGACGTTGGATCCTCCTGGAGCTCATGGTGTGAA AGATGCCTTTTGCCTGCTGAACTTTGGTGACAGTATAACTACTGATCATATTTCTCCAGCTGGAAGCATTCAGAAGGATA GTCCTGCTGCTAAATACCTCCTAGAGCGTGGGGTAGAGCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGTAATGAT GAGGTGATGGCAAGAGGAACTTTTGCCAATATTCGCCTTGTTAACAAGCTCTTGAATGGGGAAGTTGGCCCCAAGACAGT GCATGTTCCATCTGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGGTGAGTTATATCCTACTCAAGTATGACACGACTC AAAAAAGTGAAATTAATGAGTGCTACTGTTCAAAATAA
Protein sequence (LotjaGi3g1v0466300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASENPFKGNLTSLPKPGGGEFGKFYSLPSLNDPRVEKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTSSKQVEI PFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVVDHSVQVDVARSENAVQANMELEFQRNKERFAF LKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMS MVLPGVVGFKLAGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFHGDGVGKLSLADRATIANMAPEYGATMGFFPVDHVT LQYLKLTGRSDETVTMIESYLRANKLFVDYNEPQQERVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHACLDNK VGFKGFAIPKETQGKVAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLKVKPWVKTSLAPGSG VVTKYLLQSGLQSYLNEQGFNIVGFGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPL VVAYALAGTVDIDFEKEPIGTGKDGKNVYLRDIWPSTEEIAEAVQSSVLPAMFRSTYEAITKGNPMWNQLQVPADTLYSW DSNSTYIHEPPYFKNMTLDPPGAHGVKDAFCLLNFGDSITTDHISPAGSIQKDSPAAKYLLERGVERKDFNSYGSRRGND EVMARGTFANIRLVNKLLNGEVGPKTVHVPSGEKLYVFDAAMVSYILLKYDTTQKSEINECYCSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 763 | 763 | 0.0 | ||
| PANTHER | 1 | 763 | 763 | 0.0 | – | |
| Gene3D | 4 | 372 | 369 | 6.2E-183 | – | |
| SUPERFAMILY | 19 | 633 | 615 | 1.96E-233 | ||
| TIGRFAM | 23 | 762 | 740 | 0.0 | ||
| Pfam | 65 | 568 | 504 | 1.4E-182 | ||
| CDD | 86 | 570 | 485 | 0.0 | – | |
| PRINTS | 147 | 160 | 14 | 1.4E-46 | ||
| PRINTS | 171 | 179 | 9 | 1.4E-46 | ||
| PRINTS | 200 | 213 | 14 | 1.4E-46 | ||
| PRINTS | 214 | 229 | 16 | 1.4E-46 | ||
| PRINTS | 276 | 289 | 14 | 1.4E-46 | ||
| PRINTS | 290 | 303 | 14 | 1.4E-46 | ||
| PRINTS | 372 | 386 | 15 | 1.4E-46 | ||
| Gene3D | 373 | 596 | 224 | 5.0E-114 | ||
| ProSitePatterns | 433 | 449 | 17 | - | ||
| PRINTS | 437 | 448 | 12 | 1.4E-46 | ||
| ProSitePatterns | 499 | 512 | 14 | - | ||
| PRINTS | 499 | 512 | 14 | 1.4E-46 | ||
| Gene3D | 597 | 658 | 62 | 5.8E-27 | – | |
| SUPERFAMILY | 637 | 762 | 126 | 1.35E-36 | – | |
| Gene3D | 660 | 765 | 106 | 4.6E-44 | ||
| Pfam | 697 | 762 | 66 | 3.7E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0466300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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