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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0468400 |
| Transcript ID | LotjaGi3g1v0468400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G05100.1 mitogen-activated protein kinase kinase kinase 18; Swiss-Prot: sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A; TrEMBL-Plants: tr|G7JEQ9|G7JEQ9_MEDTR MAP kinase kinase kinase; Found in the gene: LotjaGi3g1v0468400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88398440..88399770) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAAGTGTCTCCATTCAACTACTGAATTAGGAGTACAAGTATAAAAGGTCAAATAACAGAGTCAGACTCTGCCCTCAG AAACAGAGTTTTTAGTTCTTGTGTTGTGTTCAAACATGGTGTGGAACAGAGGTCACACCATAGGCCATGGCTCAACTGCC ACCGTCTCCCTCGCCACCTGCAACGGCAGCATCTTCGCCGTGAAGTCCTCAGAGCTATCGAATTCAGAGCCTTTGAAAAG AGAGCAGAGAATTCTATCTTCCCTATGCTGCCCTTATGTGGTTACCTACAAAGGGTGTGACATTACCATGGAGAACAACA AGACCATGTACAATCTCTTCATGGAGTACATGCCCTTTGGCACAGTTGCTCAGGCTACTTGCGGTGGTGGCCGGCTCGAG GAGGCGGCGATCGCGTGCTACACACGGCAAGTTCTGAAGGGGCTGGAGCATTTGCATTCAAATGGGTTGGTGCATTGTGA CATCAAGGGTGCCAACATCTTGATTGGTGAAGATGGAGCCAAAGTTGGAGACTTTGGATGTGCCAAGAGTGTTATGGAAA CAGCAGAGCCTAATTGCGGCACGCCGGCGTTCATGGCGCCAGAGGTGGCGCGTGGGGATGAACAGGGGTATGCTAGTGAT ATTTGGTCACTTGGGTGCACTGTGATTGAAATGGCTACTGGTTCTGCACCATGGCCTAATGTGGCAGACCCAGTTTCAGT TCTTTACCATATTGCATTTTCTGATGAGGTTCCTGAGATTCCATGTTTTCTATCTGAGAAAGCAAAGGATTTCCTAGGGA AGTGTTTTATGAGGAATCCACAAGAGAGGTGGAAGGCTAGTCAACTTATGGAGCATCCATTTCTTGTGGAGTTATGTTTC AATTCTAAGCAAGTTTTGAAATCCAATTCAATTTCCCCAACAAGTATTCTTGAACAAGGCTTTTGGAGGTCTATGGAAGA ATCAGAAGGTTTTGGAAGTTTGGTCCACACAACTAGTGTTGAGAATTCTTCTCCTGCTGACAGGGTCAGAATGTTAGCTG CATGTTCAGGGGAACAATGTTGGGCATGGCATGATGATGATGGTGATGATGAGAATTGGATCAATGCCAGAGGAAATGAG ACAGTAAATGCTCTTGGAAATTGTGGGTCAGATAGAGGTTCAATAGTAGTGATGGGTTGGTAAAAAGCAATGTGAGAAGT AGAATTAGTGAACATTTTTGTCAGGATCACAAATTTAGGGATGCTAGTCTTGTAATTAGTAATCTCAATTTTGAGAGAGG CACTGTTGCTTTGATGCCACTCCCATTCACATTGAATTTTTTATAATGAAG
CDS sequence (LotjaGi3g1v0468400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTGGAACAGAGGTCACACCATAGGCCATGGCTCAACTGCCACCGTCTCCCTCGCCACCTGCAACGGCAGCATCTT CGCCGTGAAGTCCTCAGAGCTATCGAATTCAGAGCCTTTGAAAAGAGAGCAGAGAATTCTATCTTCCCTATGCTGCCCTT ATGTGGTTACCTACAAAGGGTGTGACATTACCATGGAGAACAACAAGACCATGTACAATCTCTTCATGGAGTACATGCCC TTTGGCACAGTTGCTCAGGCTACTTGCGGTGGTGGCCGGCTCGAGGAGGCGGCGATCGCGTGCTACACACGGCAAGTTCT GAAGGGGCTGGAGCATTTGCATTCAAATGGGTTGGTGCATTGTGACATCAAGGGTGCCAACATCTTGATTGGTGAAGATG GAGCCAAAGTTGGAGACTTTGGATGTGCCAAGAGTGTTATGGAAACAGCAGAGCCTAATTGCGGCACGCCGGCGTTCATG GCGCCAGAGGTGGCGCGTGGGGATGAACAGGGGTATGCTAGTGATATTTGGTCACTTGGGTGCACTGTGATTGAAATGGC TACTGGTTCTGCACCATGGCCTAATGTGGCAGACCCAGTTTCAGTTCTTTACCATATTGCATTTTCTGATGAGGTTCCTG AGATTCCATGTTTTCTATCTGAGAAAGCAAAGGATTTCCTAGGGAAGTGTTTTATGAGGAATCCACAAGAGAGGTGGAAG GCTAGTCAACTTATGGAGCATCCATTTCTTGTGGAGTTATGTTTCAATTCTAAGCAAGTTTTGAAATCCAATTCAATTTC CCCAACAAGTATTCTTGAACAAGGCTTTTGGAGGTCTATGGAAGAATCAGAAGGTTTTGGAAGTTTGGTCCACACAACTA GTGTTGAGAATTCTTCTCCTGCTGACAGGGTCAGAATGTTAGCTGCATGTTCAGGGGAACAATGTTGGGCATGGCATGAT GATGATGGTGATGATGAGAATTGGATCAATGCCAGAGGAAATGAGACAGTAAATGCTCTTGGAAATTGTGGGTCAGATAG AGGTTCAATAGTAGTGATGGGTTGGTAA
Protein sequence (LotjaGi3g1v0468400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVWNRGHTIGHGSTATVSLATCNGSIFAVKSSELSNSEPLKREQRILSSLCCPYVVTYKGCDITMENNKTMYNLFMEYMP FGTVAQATCGGGRLEEAAIACYTRQVLKGLEHLHSNGLVHCDIKGANILIGEDGAKVGDFGCAKSVMETAEPNCGTPAFM APEVARGDEQGYASDIWSLGCTVIEMATGSAPWPNVADPVSVLYHIAFSDEVPEIPCFLSEKAKDFLGKCFMRNPQERWK ASQLMEHPFLVELCFNSKQVLKSNSISPTSILEQGFWRSMEESEGFGSLVHTTSVENSSPADRVRMLAACSGEQCWAWHD DDGDDENWINARGNETVNALGNCGSDRGSIVVMGW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 306 | 305 | 7.3E-67 | – | |
| ProSiteProfiles | 3 | 250 | 248 | 38.252 | ||
| SMART | 3 | 250 | 248 | 8.0E-71 | ||
| CDD | 3 | 250 | 248 | 1.30593E-134 | – | |
| PANTHER | 5 | 337 | 333 | 2.5E-139 | – | |
| Pfam | 5 | 250 | 246 | 1.3E-52 | ||
| PANTHER | 5 | 337 | 333 | 2.5E-139 | – | |
| SUPERFAMILY | 5 | 295 | 291 | 5.86E-70 | ||
| ProSitePatterns | 9 | 30 | 22 | - | ||
| ProSitePatterns | 118 | 130 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0468400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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