Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0476900 |
| Transcript ID | LotjaGi3g1v0476900.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase, putative; TAIR: AT2G27500.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9ZQG9|E1314_ARATH Glucan endo-1,3-beta-glucosidase 14; TrEMBL-Plants: tr|K7LTU1|K7LTU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0476900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89348523..89353445) extracted from Lotus japonicus Gifu genome v1.2.
TATTATTATCTTGAAAAACTTACTGGAAGAACGTTGCAATTAAAATGATACAGAAATGACATTGCTCTGTTGAAAACAGA GTTGCTCTGCTCCTCATTGAGGTATGATTATTTAATATACACCCACACCACACACACACACACACACATTATGAGAAGCT CTCTTTGGTGGCATCATCTCAGTTTCTGTGCCAACAAGGGTGGTGGTCTCAGTTGGTGATTATGGCCAAGATCAGATCAG AAATCACAACTTTTTCCTCCTTCTTCAAATCAGTGCCTTTGCTTCTTCTCATCATTTCTGGTTCGTTATCTACTTTGTCT TCTTCTGCATGATTGATTCCCTTTAATTCCAGAAATAAAGTGGATGAACTAGAAAAGAAAAGAAACAGCTTACAAGTTAT CCTACTAGTCCTATTCTGTTCACACACTTGCCTTGGAAATGGAACATTCTTTCAACCCTTGTTGAGTTGTGATTAGAAGA ATACTACTCCTTTTAGCTTCACAGAATGAAAGGCCATGAGTATAGTATCTATAACATTATCTCAACTTGGTGTAGTCTCT ATTCTCTCTATACACTCAAAAGCTTAGATTTGCTGTGGTACTATATTTATAATAACTTTCTACTTTTTTCTTCTTCACAT TGATGTGGAACTCAGATGAGTACCTACTTTGGCGCAATAGATGGCCATCTTGATTATTGGGCAGTAATGAGCTTCATCTT TGTTAGTGTTCATTTTTAAAGTGAGTGGTTAATGAGAGTTAACCAGATATTTTCTCTCATGAACATTCTGATTGATGTTT CTAAATATATTTCATTTTTCAGATTCATTTGTGCAAATTCATGGCCTTGGTTTTGGAATCAACTATGGACAGATAGCCAA CAATCTACCTTCTGCAACTCGAGTGGCTGTTCTTATAAAATCCATGAATGTGAGTAGAATCAAACTCTATGATGCTGATC CAAATGTTCTCATCGCCTTTTCGAAATCGAATGTGGAATTCGCTGTAGGACTAGGAAATGAGCATCTTCAGAACATGACA AACCCTTCTAAAGCTCAAGCTTGGATTCAGAATCATGTTCAACCTCACCTTTCACAAACCAAAATCACTTGCATCACTGT GGGAAATGAAGTTTCCAATAGCAATGACACTAACTTAATGCAGAACCTTCTCCCAGCAATGCAAAATGTGCATGGTGCCC TTGTGAATCTTGGACTAGACCAACTAGTTTCTGTCACAACAGCACATTCTTTCAACATCATAGCCAATTCCTACCCTCCT TCAAATGGTGTTTTTAGGCAAGATCTGATGCAATATATCCAACCCCTTTTGGAATTTCTTTCACAAATCAACTCACCTTT TCTCATCAATGCATACCCTTTCTTTGCATACAAAGATAACCCAGATGAGGTTCCTTTAAACTATGCACTTTTTCAGCCAA ATCAAGGCATGGTTGATTCAAAAACCAACTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCC ATCAAAGCTGTGGGGTACAGCAACATTGAAGTGAGGATTTCTGAGACAGGTTGGCCTTCTAAGGGGGACCCTGATGAAAT TGGAGCTACACCACAAAATGCACTATTGTATAATGGTAACTTGATGAGAAGGATAGAGAAGAAGGAAGGAACTCCAGCAA ATCCTTCAGTTCCAATTGATATTTATGTGTTTGCACTTTTTAATGAGAATATGAAGCCTGGTCCTGCTTCAGAGAGAAAT TATGGCCTTTACTATCCTGATGGCAATCCTGTTTATAACATTGGATTGCAGGGTTATCTCCCAGAGATGGTTATGCCATC CAAATCTAATGTAAGTTAACACATTGGAAATTTCACATGCCTATCAAAATTCTCATAATGTTTTGTTTTTAATATATTTG GCTAGTAGATTATAGCATGTTTGGATCAACTTATCTTTTTTTGAATCAATTCTGAAATCAAAAGTTACTCATTAAAGTTT CTTCCCAAAATGGTAGAATCAAAGATTTCCAAACTTAGTTTTTATTTTCATGTATCTTAATGCTTCCATCACTTTTCATA TGCAGTTTTTGTCTGTCAATTATCTCGTCTGTACAATTACATGCTTGATTTTTTCTTGGGAGCTTTCAAGATTGTGATCA GAAGAAGGGAGGGATCAAGAGGAAACACAGGGAATCATATACATCATTCTTTTGCCATATGAAGTTATTCAGGTGAGGAA GATTTACATTGTCCATGATTTTTCTTTCTCTCTTTCTATTTCTAGTTTGTTTGTACTATTCCTTGTCTTTTATTTGCAAG CTAATTGATATTTTCTCGGTCAGTATTTTAGTATGTGTGAGACACCACATGGATCATTTAATACTGAATCCATGATGGAG TATTTTATTTTTTTGAACTACATGATGGAGTAAAAACTATTATATTTCAGTCTATTAGACTGAATCCATGATAGATTTCA TTTTTTATTGTCTCTGGTCACATGCTACATAATCAAGGCCTCAGATCTTCTATCCTCAAATGTACCTCAATTTACTATCT CACAAATCTTATCATGTCAATTTACATGCTGGTTTTTAAAACACCATTTGAAAATATGGATCCACTCTACTATATTATTG TGCATGTTTGGATATATGGTGAAAAAACACGATAAAAATAAAATTACAATGGTAAATCACTATGAAGATAAAATTACGGT GGACAACTAAAAAAATTAAAAATAAATTGCTACTATCCACCATAATTTTAATTCGACTATAGTTTTTCACTATGTATCCA AATATATACTTAGGAAATTAGAAATGATGATAAGCATATGTGGGAAAGTTCAGTCCAAGGCTCAAAGGCAATACATAATT TATACCACACTTTATTCTCTACTTTCTAATTGTAATCTACAAATTAGAATAGCTTGAAATACTTCAATGTGAAAGTTTTG GAACCATATTTTGGAGATATTCTTCCTAAAATATCAATTAAAGTAGAGCCTGTCAAATGCTGTGCAATTCGTGCGTGACC CAATTGGACATTTGTGCCGACTTTAACCACCGTACCCCTAGAAAACCTTAGATTACTGGTTAGTTAATTATTAAGATACT CTATTGAGTCTCCACCTTCCACATCCCCCACTTTGTAATCAACTAATCATGCATATATGAGTCTTCCTGTGAATAAAATT ATTCTTGTCTTCAGCTGTACAAAAGTCCAATTGGGGTTGCATCAGATCAGAAAAATTTTAAAAAAAGGCCTCAGAACCTC ATGCTAGAAATTCAAACCCCACATGTTTTGTCCATGGTTGTGAACCTTATCTTTGATATAGGTCCCTCTAGTTCCAATAA TTCCTCCCTTCCATTTCCTGATGAAATTTTTGTTTTTTGTTTAAATACTACTTGGGATTTTCCTGTTGCTATGTTTTTCT TTTCTGTTCTTCATCATGATTCATGTAAAATGTTCAAAACAGAACCATTTTGTATACCCATGACAAAGTACGAAAATGGA AAAATAACGAAAGGCACAAGGTACTTTTTGTTCATAAAAAGTGCACTGGAATGTTCTATTTTTCAATTTTCATACTTTTT AACTCGTATCCAAAACATGCTCAAACCTGAGTGTTCAGTAAATGGTTAGTGCAATTGTATTAAAATCATGTGGAATATTC TTCAACATTAGTCACCACTCACCAGAAATTAGCTGGTATAGCTTTTATATAAGATGGCATGGTCCATGCCTTTGAAAGTG ATTGTAGTATCCATACATTAGCTTGATCCAAAGGGGATAAGATTGACAGAGCATCCACTTAAAAATTTCTGGCTCAAATT AATATAATTCATATGGTGCATTAAAGAGGCCATTTTTTATAATTTGGCACTAGAAACAGAAAATATTGTCACACCATGTG TTAAACAACAGAGGAAAAAATAAAGAGCATGTTTTGATATTGGCAATAACTTGTTTAGTTGTCCTTTTCCCCCTTCTAAG TAGAGTGAACAATTTTCAGACATGTTGTTACAGGTTTTTATTCTGCCCAAAACATAAGATTAATAGTGGACACACAACTA CACAAGCATGTCAATATCAGAAACTACACTTAATATCATCTTACTAATAAAATTGAAGATGAGATTTCTTATTAGTTGTT ACTTTTAAATTTAAATTGTTAAACATAATTTAAGAAGTAATCTAACTTGTTGAGGATGTAGTCCAAGTTTAGATACTGGT TGGAAACCATGTGTGGACTGTCATAGTACACAGAATTTCCTTAATTTTAATTTGCTTCTGTCGACATGATTTTAAGATTG TATTTTTCTATATTGTATTCAAATATGCTCCTAATGTGAAATCTCTTAAATTGGTTGTGCATGTTGTTGACTTTGATGTA TCTTTGCATGGGACAGGGCTTTCTTTTCTTTTGTCCAAGGCAAACTCTGCACATTGCGTGAAAAGCTATGTGGAGGCAAG GTCGGCGATTTGGTTCATATAAGAGAAATTCATACATCATGGCTTAACTGCATTTTTGTTCCCCCGTATATTATTGGTGT CACAATTGTACCAAATAGCAATAATCAAATATATGAGGAATGTAGTAATTTTTTTCTTACACATTTTTTTTCTTGATAAC ACATATAAGCATCAATATGCATATGCACTAGAATATGAATTAGAAGTACCCCAAGATTGGATCCCTAGAAAGAAAATATT ACTTTAATACTGAGAAAAAAGAAAATATTATTTTGATGTAGCCATTTTCTAAATGTATCTCGTGACAACAATTTAATAGA AAAAGGGTAGGGGACAAACTTTGTTATTAAGTTACATGATTTATCATTCATTTTTTGTAAAAAAGTTAGATGATGTAAGT GATTGTACATTAAACCACGGGTTGTGATGTAGTGATTGTTCAC
CDS sequence (LotjaGi3g1v0476900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCTAAATATATTTCATTTTTCAGATTCATTTGTGCAAATTCATGGCCTTGGTTTTGGAATCAACTATGGACAGAT AGCCAACAATCTACCTTCTGCAACTCGAGTGGCTGTTCTTATAAAATCCATGAATGTGAGTAGAATCAAACTCTATGATG CTGATCCAAATGTTCTCATCGCCTTTTCGAAATCGAATGTGGAATTCGCTGTAGGACTAGGAAATGAGCATCTTCAGAAC ATGACAAACCCTTCTAAAGCTCAAGCTTGGATTCAGAATCATGTTCAACCTCACCTTTCACAAACCAAAATCACTTGCAT CACTGTGGGAAATGAAGTTTCCAATAGCAATGACACTAACTTAATGCAGAACCTTCTCCCAGCAATGCAAAATGTGCATG GTGCCCTTGTGAATCTTGGACTAGACCAACTAGTTTCTGTCACAACAGCACATTCTTTCAACATCATAGCCAATTCCTAC CCTCCTTCAAATGGTGTTTTTAGGCAAGATCTGATGCAATATATCCAACCCCTTTTGGAATTTCTTTCACAAATCAACTC ACCTTTTCTCATCAATGCATACCCTTTCTTTGCATACAAAGATAACCCAGATGAGGTTCCTTTAAACTATGCACTTTTTC AGCCAAATCAAGGCATGGTTGATTCAAAAACCAACTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTAT GCTGCCATCAAAGCTGTGGGGTACAGCAACATTGAAGTGAGGATTTCTGAGACAGGTTGGCCTTCTAAGGGGGACCCTGA TGAAATTGGAGCTACACCACAAAATGCACTATTGTATAATGGTAACTTGATGAGAAGGATAGAGAAGAAGGAAGGAACTC CAGCAAATCCTTCAGTTCCAATTGATATTTATGTGTTTGCACTTTTTAATGAGAATATGAAGCCTGGTCCTGCTTCAGAG AGAAATTATGGCCTTTACTATCCTGATGGCAATCCTGTTTATAACATTGGATTGCAGGGTTATCTCCCAGAGATGGTTAT GCCATCCAAATCTAATTTTTTGTCTGTCAATTATCTCGTCTGTACAATTACATGCTTGATTTTTTCTTGGGAGCTTTCAA GATTGTGA
Protein sequence (LotjaGi3g1v0476900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLNIFHFSDSFVQIHGLGFGINYGQIANNLPSATRVAVLIKSMNVSRIKLYDADPNVLIAFSKSNVEFAVGLGNEHLQN MTNPSKAQAWIQNHVQPHLSQTKITCITVGNEVSNSNDTNLMQNLLPAMQNVHGALVNLGLDQLVSVTTAHSFNIIANSY PPSNGVFRQDLMQYIQPLLEFLSQINSPFLINAYPFFAYKDNPDEVPLNYALFQPNQGMVDSKTNLHYDNMLYAQIDAVY AAIKAVGYSNIEVRISETGWPSKGDPDEIGATPQNALLYNGNLMRRIEKKEGTPANPSVPIDIYVFALFNENMKPGPASE RNYGLYYPDGNPVYNIGLQGYLPEMVMPSKSNFLSVNYLVCTITCLIFSWELSRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 352 | 352 | - | – | |
| PANTHER | 4 | 367 | 364 | 6.8E-208 | – | |
| PANTHER | 4 | 367 | 364 | 6.8E-208 | – | |
| Gene3D | 19 | 341 | 323 | 5.5E-125 | – | |
| SUPERFAMILY | 20 | 337 | 318 | 6.92E-88 | ||
| Pfam | 21 | 336 | 316 | 1.0E-91 | ||
| Phobius | 353 | 372 | 20 | - | – | |
| Phobius | 373 | 375 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0476900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…