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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0483600 |
| Transcript ID | LotjaGi3g1v0483600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ring/U-Box superfamily protein; TAIR: AT2G27950.1 Ring/U-Box superfamily protein; Swiss-Prot: sp|P29503|NEUR_DROME Protein neuralized; TrEMBL-Plants: tr|I1LKY4|I1LKY4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0483600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90090683..90096769) extracted from Lotus japonicus Gifu genome v1.2.
CGCCGCTCTTTCCCTCTCTCCATTCGCTCTCTCTCTCTCTCTGTTTCTTTCTTCCATTTTCTTCTCATTTTCGTTGTCAT CATTATTCTCTCTCTTTCTCTTTCTCTCTCAATTTCCTTTCTTCACTGCTAGGGTTTCGTTTCGTTCCCTTCCCTTTACT CCATAATCAACCCCACGCTTTCACCGGTACGTTCATTCTCCTTCGCGCTTTAACCTCACCATTCACTCAATGCCTTGTTC TTGTCAATTTTCCACATTCTGTTACCGAATCCTCCAGAATTCTTATTTATCTGTTCAATTTGTTATGTGTTTTGCAATGC AGATTTGAATTCCGTTTCGATTTATCTTTTCTCTTTAATTTATTCTGTGGCTGCGATTGCTTTTTGTTTCTCTGTGACGT AATGAGAATTGAATCTTCCGATTCCTTGTTTTGGATTCCAAATAATGATGGATCTCACCACGCTAAGCCGAATGGCTCTG TTTTTTCTAAGGTTTACAAAATGCAGATTTTGGGAATTTTATTTTATTGTGGTTATTTATATTATATTTTCTCAATAGTT TTGATTGTGAGTGAAAAATGAAATTTAAATTCATTTAGTTTGTGATGCAGGATAAGGAGTAATTAGCAGTGGTTTAGTAC CTTCAACTGGAAATTCCGAAGTCTGTGATTAGTTTCCTTGATGGGGAGAAGACTGATGGTGCCGGCGGCGAGGAGAGTAA TACTATTGGCTAATGTATGGAGGTTGAACTTGAGTCCATGAAAATATAACAAGATCTGTTTCTGAATTTTTTTGACTTGT TTTCCCCTCTTTGTCGGTTATCTGATGCGATTTTTAGTGCATTTGAATCAGATGGGTTGAAGAGATTTGCCGTATGCTTG CTAGAAAAGTAAACTAGAAATGGCGATTGCTGGTCTGCGCAGTGTGTCTGTGCTTGATTCGTCTTTCCTAAGGGACTCCC ATTCTCAGTCGTCGAGGAGAGGGGGAGATGGTGGAAGAAGAGGAAGCACCCGGTCGTCTTCGCTCTTGCAAATGTGGCGA GAGCTTGAGGATGAGCATGCGGTGACTCAAGTTCGAGGAAGGCCTGGCGAAGTGCTACTTGAACAAAGGGGTGGTGTTGG GTTGAATGCTGACCTGCCACGGGAAGATAGCCAAGAGATTGGACTGGGACGTGTTTTAGAGGATGTAATTTTGGGTGAGA ATGAATCTGAAACATGGTCACAGTCACACAGCCATAACGAGTCCCATGATGACCGTGAGGATTTGAACAATTCTAGTTGT GGAAACTCATCTGACTTGGGAGAAGTTGAAAGGGAAAGAGTGAGGAAAATTTTCAGGGAATGGATGAATAGTGGTGCTCG GGATCATGGATCAAGTATTCCCCGGAGAAATGACAGTCCAAGGGGAGAATGGCTTGGAGAAACTGAGCAGGAAAGGGTGA GAATTATAAGGGAGTGGGTGCAAATGAGTAGCCAGCAGAGAAGTGTTTCTTCTGGGGATAATAGGGAAGAACCATCTGCT GAAATTGATACACAGATGGAACGTGTACGTGATGGATTTGTTGTTAACCAGAGTGAGGGCCAAATTGAGCTTACACGGAG GGGTATCCGTAAGTTATGCGGCAGGCAAGTTATGCTTGACATGCTTAAGAAGGCTGAGAGGGAAAGGCAAAGAGAAATTC AGGAGTTGTTGGATCATCGTTCTGTATCTCAATTCCCTCATCGTAATCGCATTCAGGTTTGTCCAATAAATGACAAATTT CTAATTTATTGTATTTCTCCCCTTCTCCTGTACCATATGTTTCACTAACTGTTAAATTTTGATTGGTACTATATTCCTAT GAACTGGGTAAAAATTCACAAGTTGAGTCAGACTGCACTTGTGATTGAGCACTTTGGCTTTATCCTGAATTTCTTGGTGA AATTAAAGTCGGATAATATCATTATAGCTGTAGGCAGAGGAAACTTATGTTTATAATTTCATGGAGGCATTTAATAGAAC ACTCCTAATGTAGAAATTATCCAAGATATAATCATTGGAAAACTTGGGCATTGCAAATTAGAAATTCTAGAAGGGCTAAC TCAACCAAACATGATTTAGATCCCGCCCTTTTCACTTTATTTGATGAATGGCTGTTAAAATTATTGCAGGCATTACTTAG AGGCAGGTTCTTGAGAAATGATAGATCTGTTGATCATAACAGGTCAACTTCTGTTGCAGAGAGTGAATTAGGCTTTTTGA GGCGAAAACAAACTGTATCGGGTCTAAGGTATCCATTCTTTTTATACCTTGTCTGAACTCTTTTGGATCCCTCTCTCCTT TTATTAACTAATGACATTTTTGTCTTGAATAATTTTATTGTATTTATTATAACATCCTGTGCGTTGGGTTTCTCTTTTCT ATAGCCATCTTATGTCTAATAAAATGATAAATTTATGTCATTTAATTCATTACTTTCTATATATCTGATTCGCTTGAACC TATTTTTTAGTTCTTTTTTAAATATGTCAAATGTTATTTTGTTATGGCTGGAAAAATATATTTATCTATGTCAATTGTCA AGTAGTATATTTTTATCCTGTTTGAGATGAGGTTGGTGGGCTGTGGCTCTCTACAGTGGACATTTTGTTCGGAATTAACG TATTGGCAGTTTTCTAGGTTGATTGTAAAATTAATAACTCATGTGGATGAAAATGATCTTATTTACCCTATTCCTCCTGA ACCATCGATTTAGAACTGCTCTGTATTTCTACATCACTTAAAGCTACCCATCCCTGTTCTGCTTGGAGGCTTGTTTATTA TTTTTACCACCTCTTATGCCTATAATATTGACATATCTTCTTGACAGGGAAGGATTCGTCTCTAGGAAGGACAACACTGG TTGCAGTCAAGCAACCAGCAACCTGTCCGATACTTCATCTAACATTGATGCTGATTTCAATGCTAATGTACAAACTGGAG CAAGCAGTTCACATTTGGTCCTAAGTATACATTCTGAACAGTCTGGACCTGATAACGAAGGAAGTAATGGACTTGGGATA TCAGGGGGTCAGAACTGTTTTCAAGTAACTGGATGTGAGAATTTAGATAGGCAAGGTTCCAGTGCTCTTGCAGAAGATCG GTTGCAAATTGAGCCTGTTGATTGGCAGCCATCATTCAGTGTTGGGGTTGAAAGGAGTGATGATGCTGGGCAAAATGCTG AAGTGATGTCAACTCAGGATACAGCTAATGAACTTACCCATCAAAGCTTACAAATTGAAGATTCTGAGCATAGTGATAAT CAGGAATTTAGTGAGGTACATAATGAGACATCGGAGCTGGGTGATATAAGAAATGGTGAAAACAGCTCATCAAATGACAA CAATCATAATGAGGGCAACACTGTTGATATGAATTGGATTGATGAATCTAGTGCTCTAGAAGGAGAACAGCCGGAAGAAG TTATTCAAAATGAAGGAAGCGATTGGCATCAGAGTAACACTGAATGGAGAAATAGCACTGATGAAAGTGTTGATGATAAT CAACACAGTAATACAACAAATGAGTGGCATGAGAACAGTTTGGCAAATGAGGATGGAGAAAACTCTCGGCTTCAAGAGGC TCCTGAAGTGTGGCAGGAAGACAGTGGCTTCCAAGAAGCCGTGGAAAATTGGTTGGGAGGGCCTTCTAATCATGACAGTG CTCCAGTTGGTAGAGTTCATGGATTTTATTTTCCTGATGATGACCATGTGTACAGTGTTGAACTCAGGGAACTTCTTAAT AGGTATTTACATACGAAAGATTAGTTTTTGCACTCATTCTTTTCAGAAAAGGTGTAATCCAGAATAACTGTTTCTGTTTT TCTTGCAGGAGAAGAGTCTCTAATCTCCTTCACAGTAGTTTCCGTGCGAGTCTTGACCAGTTGGTACAATCATATGTTGA AAGGCAAGGCCATGCTAACATGGAGTGGGAGCTGCAAGAGACAACCCCTTCTTCTGCCTCGGTAGAACAAGACCTTGAGC AGCAGAGTAGAGATCAGATTGTTGATCAGGAGGATACTATTAATAGTCCACTTAACTTGCCCTCTTTACCAATACCTCCT CCTTTGCCTCTTTGGGACCAGCACCATCATCGTGATAGCTGGCAACATAATGACATAAATAATCAGCGCCTAGGAATGGT GCGTTTTCTTTGGTGATATTTTACTTCATATTCTCTAATATAGTGAAAAGTGATTTTATGTGGCATTGGTGATTATTTTG TTAGTTAATAATTGTATTAAGTTTTATTTGTATGGCAGATAATTTTCTCATAAATTACTTGGTAGGTATCAAACAATTGA AAATATGTGAAATAACTACTTTTCCTTAAATGATGTCTTACACTGTAATGTGGTATAAACTGTTCATAGTTAGGTCTTTC CTCTTTACAAATACCTTACCACTTATTTTTTATTTTTTTGCAGGATTGGGAGATTGTCAATGACTTGAGAATTGACATGG CCAGATTACAGCAAAGAATGAATAATATGCAGAGGATGTTGGAGGCCTGCATGGATATGCAACTTGAGTTGCAGCGCTCA ATAAGACAAGAAGTTTCTGCAGCTCTCAATCGCTCAGCTGGTTCATCAGGTTTGCAATTTTTTACCCTTTCATGTTTAGC CAACCAATGTGTTCTAGCTGTGATGTTTTTTCAAGAACAAGAATTTCGTTGGTGCAAAGCTCACTGAGAAGACCTTGTTA AATTTATCCCAGGAACACATGACTGTGAGTCACCGGATGGAAAATCGAAGTGGGAATGTGTGAGAAAAGGACTTTGCTGT GTTTGCTGCGAAAGCAATATTGATTCTTTGTTGTACAGGTACTACTCATTATTGGTAACTAGTCACGTCGGTTGCCCTGT TGCACCTTTATAACCACAAAATAACGTTTTGTTTTTGTTGCAGATGTGGGCACTTGTGTACATGTTCAAAATGTGCTAAT GAGTTGCTTCAAAATGGAAGGAAATGCCCTATGTGTCAAGCGCCTGTGGTGGAGGTGATACGTGCTTATTCTATTCAATA ATCGGTGACATTAAAATAAAGGTCACACTTTTAACTATATACAGAATTCTAACAAGTTTTACCTCCTGGACGTCTCCAGG TATTTTTTTTTTTTTCTGTTTCTTACTGTGATTACTGTATTCATGTCAAGTGCACCAATGGAACATATGATGGCATTTTT TTGTGGCCTTAATTCTGATATGAATAAAAATTTGTACTTTGTTTTTTGAAGTTTCGATTTGCACCTTTTGTTTGATTTGG AGGATAGGATACTCGTCCTTTTAATTTATAGGTGGTGCCTGGATCATGTTTTAGACTTTGATAGATCAACCTGTCCTACG TGCAATGTCTTGATGGTGTTTAAGACTCACGTTTGGGTGGTACCCTGCATTAGATGCATATGTCAAAATCAGATTGGTTT GGCTATGCCGTGGATTGAGTTCTTGCCTTGCTGTCATGATCCCTACCAACACTGACTTGTCATGAAAATTGCAATTATGT TGAGTGCAGTTAAGGGGCAATAGAAATTTTTAGTATATATTAGTTATATTAAATGTAATACTTTCTAGTAATTTTTTTTT TCTGTTTTTAATTATTAACCAGTGTTGTCAAGGATCTTGTTAGCATTTGTTTATGTAGTAAGGTTGTTCAGGTTTGTTTA TTGAAGTGTGCTCTGATTCTGAAGATAAATTAGCTTGACCTATTGACAGCATATCACAGCTATAAAAAAATTGTCGGATT AAATATCATTTTGAAATGTTAATTTTGGTGTTATTATATTATATTGTTTACTTTAGCTTGGCTGGGAGTTTGGTGAGACA ACAAATATTGGCATCCACGTAATTAATGGTGTAGTCTATTTTACTTGGGCTGTAGGTTTGGGAGAACGACCCAATAACAT CCAAATTCACTACACGTCTTTGGATAAATATTAATATTTGGAAAGCGAAATGTGGTTGCTAGGAAAAGAAGTAAAATCCC TTTCTATTATTTCTATTTAATCAATGCATTAACATGTGCTATTATTTTTATTATAATGGTTCTTTCATACAGTTACATAA ATCTTAT
CDS sequence (LotjaGi3g1v0483600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATTGCTGGTCTGCGCAGTGTGTCTGTGCTTGATTCGTCTTTCCTAAGGGACTCCCATTCTCAGTCGTCGAGGAG AGGGGGAGATGGTGGAAGAAGAGGAAGCACCCGGTCGTCTTCGCTCTTGCAAATGTGGCGAGAGCTTGAGGATGAGCATG CGGTGACTCAAGTTCGAGGAAGGCCTGGCGAAGTGCTACTTGAACAAAGGGGTGGTGTTGGGTTGAATGCTGACCTGCCA CGGGAAGATAGCCAAGAGATTGGACTGGGACGTGTTTTAGAGGATGTAATTTTGGGTGAGAATGAATCTGAAACATGGTC ACAGTCACACAGCCATAACGAGTCCCATGATGACCGTGAGGATTTGAACAATTCTAGTTGTGGAAACTCATCTGACTTGG GAGAAGTTGAAAGGGAAAGAGTGAGGAAAATTTTCAGGGAATGGATGAATAGTGGTGCTCGGGATCATGGATCAAGTATT CCCCGGAGAAATGACAGTCCAAGGGGAGAATGGCTTGGAGAAACTGAGCAGGAAAGGGTGAGAATTATAAGGGAGTGGGT GCAAATGAGTAGCCAGCAGAGAAGTGTTTCTTCTGGGGATAATAGGGAAGAACCATCTGCTGAAATTGATACACAGATGG AACGTGTACGTGATGGATTTGTTGTTAACCAGAGTGAGGGCCAAATTGAGCTTACACGGAGGGGTATCCGTAAGTTATGC GGCAGGCAAGTTATGCTTGACATGCTTAAGAAGGCTGAGAGGGAAAGGCAAAGAGAAATTCAGGAGTTGTTGGATCATCG TTCTGTATCTCAATTCCCTCATCGTAATCGCATTCAGGCATTACTTAGAGGCAGGTTCTTGAGAAATGATAGATCTGTTG ATCATAACAGGTCAACTTCTGTTGCAGAGAGTGAATTAGGCTTTTTGAGGCGAAAACAAACTGTATCGGGTCTAAGGGAA GGATTCGTCTCTAGGAAGGACAACACTGGTTGCAGTCAAGCAACCAGCAACCTGTCCGATACTTCATCTAACATTGATGC TGATTTCAATGCTAATGTACAAACTGGAGCAAGCAGTTCACATTTGGTCCTAAGTATACATTCTGAACAGTCTGGACCTG ATAACGAAGGAAGTAATGGACTTGGGATATCAGGGGGTCAGAACTGTTTTCAAGTAACTGGATGTGAGAATTTAGATAGG CAAGGTTCCAGTGCTCTTGCAGAAGATCGGTTGCAAATTGAGCCTGTTGATTGGCAGCCATCATTCAGTGTTGGGGTTGA AAGGAGTGATGATGCTGGGCAAAATGCTGAAGTGATGTCAACTCAGGATACAGCTAATGAACTTACCCATCAAAGCTTAC AAATTGAAGATTCTGAGCATAGTGATAATCAGGAATTTAGTGAGGTACATAATGAGACATCGGAGCTGGGTGATATAAGA AATGGTGAAAACAGCTCATCAAATGACAACAATCATAATGAGGGCAACACTGTTGATATGAATTGGATTGATGAATCTAG TGCTCTAGAAGGAGAACAGCCGGAAGAAGTTATTCAAAATGAAGGAAGCGATTGGCATCAGAGTAACACTGAATGGAGAA ATAGCACTGATGAAAGTGTTGATGATAATCAACACAGTAATACAACAAATGAGTGGCATGAGAACAGTTTGGCAAATGAG GATGGAGAAAACTCTCGGCTTCAAGAGGCTCCTGAAGTGTGGCAGGAAGACAGTGGCTTCCAAGAAGCCGTGGAAAATTG GTTGGGAGGGCCTTCTAATCATGACAGTGCTCCAGTTGGTAGAGTTCATGGATTTTATTTTCCTGATGATGACCATGTGT ACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGAGTCTCTAATCTCCTTCACAGTAGTTTCCGTGCGAGTCTTGAC CAGTTGGTACAATCATATGTTGAAAGGCAAGGCCATGCTAACATGGAGTGGGAGCTGCAAGAGACAACCCCTTCTTCTGC CTCGGTAGAACAAGACCTTGAGCAGCAGAGTAGAGATCAGATTGTTGATCAGGAGGATACTATTAATAGTCCACTTAACT TGCCCTCTTTACCAATACCTCCTCCTTTGCCTCTTTGGGACCAGCACCATCATCGTGATAGCTGGCAACATAATGACATA AATAATCAGCGCCTAGGAATGGATTGGGAGATTGTCAATGACTTGAGAATTGACATGGCCAGATTACAGCAAAGAATGAA TAATATGCAGAGGATGTTGGAGGCCTGCATGGATATGCAACTTGAGTTGCAGCGCTCAATAAGACAAGAAGTTTCTGCAG CTCTCAATCGCTCAGCTGGTTCATCAGGAACACATGACTGTGAGTCACCGGATGGAAAATCGAAGTGGGAATGTGTGAGA AAAGGACTTTGCTGTGTTTGCTGCGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGGCACTTGTGTACATGTTCAAA ATGTGCTAATGAGTTGCTTCAAAATGGAAGGAAATGCCCTATGTGTCAAGCGCCTGTGGTGGAGGTGATACGTGCTTATT CTATTCAATAA
Protein sequence (LotjaGi3g1v0483600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIAGLRSVSVLDSSFLRDSHSQSSRRGGDGGRRGSTRSSSLLQMWRELEDEHAVTQVRGRPGEVLLEQRGGVGLNADLP REDSQEIGLGRVLEDVILGENESETWSQSHSHNESHDDREDLNNSSCGNSSDLGEVERERVRKIFREWMNSGARDHGSSI PRRNDSPRGEWLGETEQERVRIIREWVQMSSQQRSVSSGDNREEPSAEIDTQMERVRDGFVVNQSEGQIELTRRGIRKLC GRQVMLDMLKKAERERQREIQELLDHRSVSQFPHRNRIQALLRGRFLRNDRSVDHNRSTSVAESELGFLRRKQTVSGLRE GFVSRKDNTGCSQATSNLSDTSSNIDADFNANVQTGASSSHLVLSIHSEQSGPDNEGSNGLGISGGQNCFQVTGCENLDR QGSSALAEDRLQIEPVDWQPSFSVGVERSDDAGQNAEVMSTQDTANELTHQSLQIEDSEHSDNQEFSEVHNETSELGDIR NGENSSSNDNNHNEGNTVDMNWIDESSALEGEQPEEVIQNEGSDWHQSNTEWRNSTDESVDDNQHSNTTNEWHENSLANE DGENSRLQEAPEVWQEDSGFQEAVENWLGGPSNHDSAPVGRVHGFYFPDDDHVYSVELRELLNRRRVSNLLHSSFRASLD QLVQSYVERQGHANMEWELQETTPSSASVEQDLEQQSRDQIVDQEDTINSPLNLPSLPIPPPLPLWDQHHHRDSWQHNDI NNQRLGMDWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSGTHDCESPDGKSKWECVR KGLCCVCCESNIDSLLYRCGHLCTCSKCANELLQNGRKCPMCQAPVVEVIRAYSIQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 856 | 856 | 0.0 | – | |
| PANTHER | 1 | 856 | 856 | 0.0 | – | |
| MobiDBLite | 17 | 39 | 23 | - | – | |
| MobiDBLite | 102 | 135 | 34 | - | – | |
| MobiDBLite | 107 | 123 | 17 | - | – | |
| MobiDBLite | 152 | 173 | 22 | - | – | |
| MobiDBLite | 158 | 173 | 16 | - | – | |
| MobiDBLite | 191 | 215 | 25 | - | – | |
| MobiDBLite | 201 | 215 | 15 | - | – | |
| Coils | 242 | 269 | 28 | - | – | |
| MobiDBLite | 421 | 440 | 20 | - | – | |
| MobiDBLite | 455 | 498 | 44 | - | – | |
| MobiDBLite | 455 | 477 | 23 | - | – | |
| MobiDBLite | 478 | 498 | 21 | - | – | |
| MobiDBLite | 510 | 578 | 69 | - | – | |
| MobiDBLite | 520 | 534 | 15 | - | – | |
| MobiDBLite | 541 | 555 | 15 | - | – | |
| Coils | 732 | 759 | 28 | - | – | |
| Gene3D | 779 | 854 | 76 | 6.7E-12 | ||
| Pfam | 802 | 848 | 47 | 1.0E-10 | – | |
| SUPERFAMILY | 803 | 849 | 47 | 3.53E-6 | – | |
| ProSiteProfiles | 804 | 843 | 40 | 10.468 | ||
| CDD | 804 | 842 | 39 | 3.8006E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0483600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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