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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0488400 |
| Transcript ID | LotjaGi3g1v0488400.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family-like protein; TAIR: AT5G60740.1 ABC transporter family protein; Swiss-Prot: sp|Q9FF46|AB28G_ARATH ABC transporter G family member 28; TrEMBL-Plants: tr|A0A0S3SCJ0|A0A0S3SCJ0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0488400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90620978..90627970) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGAATGTTGCTTTGGTTATAATTGTTGTGTTTTTCAGCTGCATTGAGGGGCCAAGGCTTGTATCTTGTCAGAAAAAT GGTGCTGGTTCTGGTGGTGCTGGGATGGAGATATTGGCCCAGCAAATGTACAAAGCCATGTCCAATTACACGTCTATCTT CAAAAGTGCAATAAAAAAAGAGCTGGGTTATTGCATACTTGATGTGTGAGTCCCATCATTAACCTCAAAAATTGCAAATA ACTTTCTTCTCTTGTAGTTTCAATTCAAATATATCACATGTCATTTTGTTTTCCTTCAGAGATGCTGATTGGGATGGGGC GTTCAATTTCACCAAAGATCTAACCTTTTTGACCTTGTGTGCCCAGGAAATGAAAGGTACTGCAATTGGGCTTGAACAAT GACTATAATTTGAGATATGTGTATGTTTGTTAATGATAAATGTAAAGAAACTGAATAGGCACAGAAATATGATCATATAT TGATAGAGCGATCATGTAATCTATATACCTAAATGACAAATCTGGTGCTATAAAGCTTTCGCTGTACGCGAGGTTTGGGT GGGGCCAGACTCATTTTGGGGATGTAATGTAGGCAGTCTTACCTTGTATTTACAACTCAAACTTGATTCAATGTAATGTA TAAACATGATGGCCGATGGGTTAATCATTAAAAATGTTTAAGGGCATGCTTTATGGATTTTTGTGTTTCCAGCATGAATC CTTACTTTGTTGGCAAATTTTTGTGTTGTTTTTTGGTGACTTTTTTTTGCAGGTGATATTACACAGAGGATGTGCACAGC AGGAGAAATTGAAGCCTATGCCAGAAGTTTTGCTAGCAGATCAAGATCCACCATCATGAAGCCTAACATAAACTGTAATA TGAGTTCATGGGTTAATGGATGTGAGCCAGGGTGGGGTTGTAAGGCTAATCAAAAAGTAGACCTTGACAGTAAGAAGAAG GAGATACCTGTTAGATCTGCTGAGTGTCAACCTTGTTGTGAAGGTTTCTTTTGTCCTCATGGGATTACTTGCATGATACG TAAGTGTTCATGCTCATACACCACCCATCACAACACTAAATTGGTTTCATTAGTCTCCATTGTCTTTCCCCTTCATTCTC CTTTATCACTTTTACACATAATTTTCCATTTTATCTTTTTTTTTTTCTCATTAGATCTTCCACTCTCTCCCCCCTTCCTT TTCTTTTTCTATTTGTCTCTTCCTCACACCTGTCTCTCACATCACACCTCCAGTGTGAGACAATCTTTATACTTTCTGGG AAAAATTTCTCCCCACATTATGAGAGATACCGGAAGAAATAAAAAGAGAGATCTGATGATAAAAAAATAGAGATAGTGAG AGAAAGTAGGTGAAAACGGGCTGGGAAAGAAAATGGGTTAGAATGTATCATAACCCTTCTTTGTCATGTGTATTTGACAT TAATAAATGATTTTCACACATTTGATGTTAGACTTCTTTTACACCCTTTGATAATGTGAGTGTGATGAGAAGAGAAAAGA GATTTAAGAAAACATGGATAGAAAAGGAAGAGAGTGGGGTATGAAATTGAAATGAATGTGAAATATTATGTGTGAAAAAA TCGTTCCTCTTGTTTATCATGCCCCATCACTGCGCTTCACTCCAAATATTTCCTCTTGTTTATTATGCTCCCAATGCATT TGAATGTTCTAATTTCACTTGTTGCCTTTTTTTTTTACTATTGAAGCATGCCCTTTGGGTTCTTATTGTCCACGAGCGCA ACTCAATAAAACTAGTGGAATATGTGAACCGTAAGTCCTTCCCTTGTAGTTCTACTTGTTTTGAATTCTTGTTTTTGGCA TACTTTAATATTTATCAGCAGAATCAATCTGCAGATATCGTTATCAGCTACCTCCTGGAAAGGATAACCATACTTGTGGA GGAGCAAATATTTGGGCAGATGTAGCTAGTAGTGGTGAGATGTTCTGTTCAGCAGGATCATTCTGTCCATCTACAATCAC AAAAAATTCTTGCAATAAAGGGTATTAATACTTATCCCTGAACTTCTAATTCTAGCACTTCTTCTTAAATTCATAAGAAG CTGTGTTGCACGGGTACGGGTACGGTACCCGGTACGGATACGGTATTGGGTACGCGGTACGCGATTTTTGAAAAAACAGG GGTACGGGTACGTTAGATATATGTATGCACATGAAAAACTTTTTTTGTATTAAAGTTTCATTCAAGACAGGCCAAGCCCG GAACAAAACAAAGGGACCCAGATAGCCAAGGAAAAAAACATGTAATCACGTGGCTAGCTTAGCAATTTCAATTCTTCTGA CACAAACACCCACTAAAGTAAAAAACTACCCACTTTCAATAAAGGCAAGTAGCTTTTGAGCAGAACACACAAAGTTTTGA TGCAACCAAGAAAGGTAGAGAGAAAGAACCATTATTCATAACTACCAGAGCTAGGGAGGGTGCGATGGAGGAAGGTGGGT AGCAAAATGAGCCTGGGAGGAAAAAGGATACGGAAGCAAACTCCAGTAATCAGGATGAAGAAAGCATGGCTCGAAGCTCT CACTCACTTGTCTCTGTTCAAAAAATTTGCCCTTTCTCTCTTTTTTTTTTTTTTTGGAAAGGGTACGCACCAGGTACGTA CCGTACGCGTACCCGCAGCGTATGCGTACCGGGTACGTACCCGGTACCCGGTACGGGTACGCGGCCAAAACCGCCGTACC CATGCATCAGAGATAAGAAGTCACTTGTTTTATCACTGCTTGTATGTTTTCAACACTGTTCTGAAATTTTTATCACTTGT TTCTACTCATTTTATGTTCCAATGCTTAATAGCCCATTTTATCTATTATTCTAAGTTACTTCTATGTATAATAATAAATT GCAGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGCGTAAGTTTTCCAAGCCTGTTATTTGATCTCTGATGTGAGAT GAAGATACCAGCAGTCATATTTTTCTATGGCCATTCTCACTTTATAAGTCTCAATTCTGTGAAATTTGAATAATGGGTCA GGGATTAATTATTATGTGTATAATCAAGTATTAAACAATCTTCATAAGAAGGCTTCAGAGTTAGCAGACATATTGACATG ATGATATTAAAAGAAGCCTACTTTTGCAATTACTTGATGTATCTATTATTATTCATTTGATATATCTGATGGAAATATGC TTTTACCTTGGATGTGAAGGCTGGTCTGTGTAGTGCAAGATGAAAATTCCAGTGATCCTTTCTCTTCTCTTGATTTTTGC CTTCCACAGGGTGTTTCAGGTATGCAAGCTGTGAGCCTAAATCAACAAATCAAAATATCACTGCATATGGTGTCCTGTTT TTTGTGAGTAATCTTTAAACATTTCATTCTATGAAGTATTGCTCATATATAAGTTCCATGACTATCAAGCAATGGTAGAA CTTATCATCATCTTTTTTTTTTTCTTTCAATGAAACTTTTATGTCACTTTAGAGGCAATGGAGGATATTGCAGAATTTAC CTTTGTTTAGATGAATTTGTAGCATGATTGAAGAGCATGCCCACTATGGTCCAGTATAACTAACCTTTCAATTTTCAATG TAGGCTGCCTTGGGTTTCCTGCTTATTATCATATATAACTGTTCTGACCAAGTTATTGCAACTCGAGAAAGAAGACAAGC AAAATCAAGAGAAAGGGCTGCAGCAAGTGTGAGAGAATCACAAGCGCGTGAAAAATGGAAAACTGCAAAAGAAACTGCCA AGAAGCATGCAGTTGGATTGCAATCACAATTATCGCGCACATTTTCTCGCAAGAAAACTTCAAAGCTAGATTTGAAAGGT TTTGGTTCTAAACATACAGACTTGCCACCTGTGGCACCAGCAGGTGCTAGTACATCAAAAGGAAAGAAAAAGGACAAAAG CAACCTCACAAACATAATAAATGATATTGAGCAAGACCCTGATAGTCAAGAAGGCTTCAATGTTCAGATAGGAGATAAGA ATGTCAAAAAGCATGCACCAAGGGGTAAACAATTGCATACTCAGAGCCAGATTTTCAAGTATGCATATGGTCAGATTGAA AAGGAAAAGGCTTTACAGGAACAAACTAAAAACATGACCTTCTCTGGAGTAATTTCAATGGCTAATGACATTGAGATAAG GAAGAGGCCAACCATTGAGGTTGCTTTTAAAGACTTAACCCTCACTTTGAAAGGGAAAAACAAACATCTATTGAGATGTG TGACTGGTAAATTACATCCCGGCCGTGTTTCAGCAGTCATGGGTCCATCCGGGGCTGGTAAGACAACATTTCTTTCTGCT TTAACTGGAAAAGCAACTGGATGTCACACAACTGGTCAAGTTCTTGTGAACGGCAAGGAATCATCAATGCGATCATACAA GAAGATCATTGGCTTTGTGCCACAAGATGATATTGTCCATGGCAATTTGACAGTGGAGGAGAATCTGTGGTTCAGTGCCA GATGCAGGTATAGCACTTTCTCTTGCATGAAGCTGGTAATTTTTTAGCTACTCTTATTCATATGCATTGCAGATCAGAGG CTTAAGAATGCATTTTTTTTTGCTAATGAGTATTCTCCTTTCACTTTTTACTATATCTATCTGCCATTGTAGACTCTCTG CTGATCTACCAAAAGAAGAGAAAGTGTTGGTGGTTGAAAGAGTCATTGAGTCTTTGGGCCTTCAGGCAATAAGGGATTCT CTGGTTGGGACAGTGGAGAAGAGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGACTGGAAATGGTTATGGA ACCTTCCCTTCTAATTTTGGATGAACCCACATCAGGTTTAGACAGTTCATCTTCTCAGTTACTGCTTAGAGCCCTTAGAC GCGAGGCTCTTGAAGGTGTCAACATATGTGTAGTCCTTCACCAACCAAGGTAATTTTGAATTAAGAAATAATACTTAGAC ACTCAAACAGTATAAACACTCGACATACACCCTATTTTTCTCTCTATCTCTCTATACTTATCATATTTATATCATATATC AAATCCATTATTTCTCTTTCTTCTCTTTGTCGGGTATCTGCACTATGCGGATGTTTGTCGAGTATCTGCACTATGCGGAT GTCTAGAAATCGTTTTCCTGAAATATGAAAACAATTTTGCTATAGAGACCACGACGCAACAGTTGTCACTTGTCCAAAAT AACACTTCCCCTCTCTTTCTTGTGTGATCTCCAGTTACACCTTGTTCAAAATGTTTGATGATTTTATACTGCTTGCAAAA GGAGGACTTACAGTGTATCATGGACCTGTGAACAAAGTGGAAGAGTACTTTTCAAGCATGGGAATTGTAGTCCCTGACCG TGTCAACCCTCCAGATTACTATATTGATATTTTGGAAGGAATAATAAAACTAAGCGCAAGTTCAGGAGTGAACCTTAAAC AACTACCTGTTAGATGGATGCTTCATAATGGGTACCCGGTGCCTATGGATATGCTGAAGACTGTTGAAGGATTGACCACC CCAGGTGGTGATGGTTCAGCACATGGAGCAGCTACCCCTGGACAAGATGCTGGAGCATCTTCTTTTGCTGGAGAACTTTG GCAGGATGTGAAGTGCAATGTTGAGATGAAGAGGGACACTCTTCAACTCAACTTCCTAAGTTCAAACGACGACTTGTCCG ATAGGAAAACACCTGGAGCTTTCACACAATACAAATACTTTCTTGGAAGGTAAGTTACAACTTACAAGAGTGAGAATGTT TCAGCTAATTGTCAAAATTTGATTTTTGACTTCATCTTGGTTCCATGCAGAGTTGGTAAGCAGAGGCTAAGAGAAGCTAG AACACAAGCTGTAGATTTTCTGATTTTGCTGCTAGCTGGCCTCTGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCTT TTGGAGCAACCGGTTATACATACACAGTAATAGCAGTTTGTAAGTTTCATCTTTACAATTGTTAGCTATACTATTACCAA TTTTCCTACCTCTTTGTCATCTGATAATGTCTCACTTTCAGCACTCCTGTCCAAGATTGCGGCTATGAGATCATTCTCAA TGGACAAGTTGCACTACTGGAGGGAAAGTGCTTCCGGGATGAGTAGCCTGGCTTACTTTCTTTCAAAGGACACGGTTGAC CATTTCAGCACAGTTGTCAAACCTCTGTTTTATCTCTCAATGTTCTATTTCTTCAACAATCCAAGATCAACTGTCACAGA TAACTACATGGTTCTGCTATGTTTGGTGTATTGTGTCACTGGCATAGCTTATGTATTGGCAATCTCCCTTCAACCCGGTC CAGCCCAGCTGGTGAGCACTAGATATTTCCAACCTTAGGTCGGATCAAGATCTTTTGTCTCCAAATGGTGTCTCAATTTC TTGTCTCACCAATAAAATCCTATCATGTCAATTGAAAAAGACATGAATAAGACAGTTACAAATTTACATCGTGGTTTTAA TTGATACGTCAACATTTTATTGGTGGGATAGATAATGAAACACAATTTAGGGATATAAGATTTCAATCTCCTTAGGTGAT GAATGCCTTGCTCTTTCTAAGTTACAACCAATCTGTTGTGTCATGCAGTGGTCAGTGTTACTTCCAGTAGTTTTGACACT CGTAGCAACCTATGATAATGAAGAAGATAGCAGTATAGTGCGCTTTCTATCTGATTTGTGCTACACCAAGTGGGCTCTTG AAGCATTTGTAATATCAAATGCTAAAAGGTTTGACTTCTGATAATGTTCATGATGATATATATCTCTAGATTTTCCTCAT GAGCTGATGTTTGACATGATTTTTTTTGTAATGTAGATATTCTGGAGTTTGGTTAATTAGTCGATGTGGTGCACTCAATT CATACGGCTATGATCTCAAACACTACAACTATTGTTTACTCCTCCTCGTTGTGACAGGGGCTATTAGCCGCATGCTTGCA TTTTTTTGTATGGTAACCTTCCAAAAGAAATAG
CDS sequence (LotjaGi3g1v0488400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGATCATTCTCAATGGACAAGTTGCACTACTGGAGGGAAAGTGCTTCCGGGATGAGTAGCCTGGCTTACTTTCTTTC AAAGGACACGGTTGACCATTTCAGCACAGTTGTCAAACCTCTGTTTTATCTCTCAATGTTCTATTTCTTCAACAATCCAA GATCAACTGTCACAGATAACTACATGGTTCTGCTATGTTTGGTGTATTGTGTCACTGGCATAGCTTATGTATTGGCAATC TCCCTTCAACCCGGTCCAGCCCAGCTGTGGTCAGTGTTACTTCCAGTAGTTTTGACACTCGTAGCAACCTATGATAATGA AGAAGATAGCAGTATAGTGCGCTTTCTATCTGATTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATG CTAAAAGATATTCTGGAGTTTGGTTAATTAGTCGATGTGGTGCACTCAATTCATACGGCTATGATCTCAAACACTACAAC TATTGTTTACTCCTCCTCGTTGTGACAGGGGCTATTAGCCGCATGCTTGCATTTTTTTGTATGGTAACCTTCCAAAAGAA ATAG
Protein sequence (LotjaGi3g1v0488400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSFSMDKLHYWRESASGMSSLAYFLSKDTVDHFSTVVKPLFYLSMFYFFNNPRSTVTDNYMVLLCLVYCVTGIAYVLAI SLQPGPAQLWSVLLPVVLTLVATYDNEEDSSIVRFLSDLCYTKWALEAFVISNAKRYSGVWLISRCGALNSYGYDLKHYN YCLLLLVVTGAISRMLAFFCMVTFQKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 186 | 186 | 4.4E-77 | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 1 | 186 | 186 | 4.4E-77 | – | |
| Phobius | 33 | 50 | 18 | - | – | |
| Phobius | 51 | 61 | 11 | - | – | |
| TMHMM | 60 | 82 | 23 | - | – | |
| Phobius | 62 | 81 | 20 | - | – | |
| Phobius | 82 | 86 | 5 | - | – | |
| TMHMM | 87 | 104 | 18 | - | – | |
| Phobius | 87 | 104 | 18 | - | – | |
| Phobius | 105 | 160 | 56 | - | – | |
| Phobius | 161 | 184 | 24 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 185 | 187 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0488400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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