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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0488400 |
| Transcript ID | LotjaGi3g1v0488400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family-like protein; TAIR: AT5G60740.1 ABC transporter family protein; Swiss-Prot: sp|Q9FF46|AB28G_ARATH ABC transporter G family member 28; TrEMBL-Plants: tr|K7LQD3|K7LQD3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0488400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90620953..90627970) extracted from Lotus japonicus Gifu genome v1.2.
AGTAAAAGAGAGGGTCCCAATAAGACAAAGAATGTTGCTTTGGTTATAATTGTTGTGTTTTTCAGCTGCATTGAGGGGCC AAGGCTTGTATCTTGTCAGAAAAATGGTGCTGGTTCTGGTGGTGCTGGGATGGAGATATTGGCCCAGCAAATGTACAAAG CCATGTCCAATTACACGTCTATCTTCAAAAGTGCAATAAAAAAAGAGCTGGGTTATTGCATACTTGATGTGTGAGTCCCA TCATTAACCTCAAAAATTGCAAATAACTTTCTTCTCTTGTAGTTTCAATTCAAATATATCACATGTCATTTTGTTTTCCT TCAGAGATGCTGATTGGGATGGGGCGTTCAATTTCACCAAAGATCTAACCTTTTTGACCTTGTGTGCCCAGGAAATGAAA GGTACTGCAATTGGGCTTGAACAATGACTATAATTTGAGATATGTGTATGTTTGTTAATGATAAATGTAAAGAAACTGAA TAGGCACAGAAATATGATCATATATTGATAGAGCGATCATGTAATCTATATACCTAAATGACAAATCTGGTGCTATAAAG CTTTCGCTGTACGCGAGGTTTGGGTGGGGCCAGACTCATTTTGGGGATGTAATGTAGGCAGTCTTACCTTGTATTTACAA CTCAAACTTGATTCAATGTAATGTATAAACATGATGGCCGATGGGTTAATCATTAAAAATGTTTAAGGGCATGCTTTATG GATTTTTGTGTTTCCAGCATGAATCCTTACTTTGTTGGCAAATTTTTGTGTTGTTTTTTGGTGACTTTTTTTTGCAGGTG ATATTACACAGAGGATGTGCACAGCAGGAGAAATTGAAGCCTATGCCAGAAGTTTTGCTAGCAGATCAAGATCCACCATC ATGAAGCCTAACATAAACTGTAATATGAGTTCATGGGTTAATGGATGTGAGCCAGGGTGGGGTTGTAAGGCTAATCAAAA AGTAGACCTTGACAGTAAGAAGAAGGAGATACCTGTTAGATCTGCTGAGTGTCAACCTTGTTGTGAAGGTTTCTTTTGTC CTCATGGGATTACTTGCATGATACGTAAGTGTTCATGCTCATACACCACCCATCACAACACTAAATTGGTTTCATTAGTC TCCATTGTCTTTCCCCTTCATTCTCCTTTATCACTTTTACACATAATTTTCCATTTTATCTTTTTTTTTTTCTCATTAGA TCTTCCACTCTCTCCCCCCTTCCTTTTCTTTTTCTATTTGTCTCTTCCTCACACCTGTCTCTCACATCACACCTCCAGTG TGAGACAATCTTTATACTTTCTGGGAAAAATTTCTCCCCACATTATGAGAGATACCGGAAGAAATAAAAAGAGAGATCTG ATGATAAAAAAATAGAGATAGTGAGAGAAAGTAGGTGAAAACGGGCTGGGAAAGAAAATGGGTTAGAATGTATCATAACC CTTCTTTGTCATGTGTATTTGACATTAATAAATGATTTTCACACATTTGATGTTAGACTTCTTTTACACCCTTTGATAAT GTGAGTGTGATGAGAAGAGAAAAGAGATTTAAGAAAACATGGATAGAAAAGGAAGAGAGTGGGGTATGAAATTGAAATGA ATGTGAAATATTATGTGTGAAAAAATCGTTCCTCTTGTTTATCATGCCCCATCACTGCGCTTCACTCCAAATATTTCCTC TTGTTTATTATGCTCCCAATGCATTTGAATGTTCTAATTTCACTTGTTGCCTTTTTTTTTTACTATTGAAGCATGCCCTT TGGGTTCTTATTGTCCACGAGCGCAACTCAATAAAACTAGTGGAATATGTGAACCGTAAGTCCTTCCCTTGTAGTTCTAC TTGTTTTGAATTCTTGTTTTTGGCATACTTTAATATTTATCAGCAGAATCAATCTGCAGATATCGTTATCAGCTACCTCC TGGAAAGGATAACCATACTTGTGGAGGAGCAAATATTTGGGCAGATGTAGCTAGTAGTGGTGAGATGTTCTGTTCAGCAG GATCATTCTGTCCATCTACAATCACAAAAAATTCTTGCAATAAAGGGTATTAATACTTATCCCTGAACTTCTAATTCTAG CACTTCTTCTTAAATTCATAAGAAGCTGTGTTGCACGGGTACGGGTACGGTACCCGGTACGGATACGGTATTGGGTACGC GGTACGCGATTTTTGAAAAAACAGGGGTACGGGTACGTTAGATATATGTATGCACATGAAAAACTTTTTTTGTATTAAAG TTTCATTCAAGACAGGCCAAGCCCGGAACAAAACAAAGGGACCCAGATAGCCAAGGAAAAAAACATGTAATCACGTGGCT AGCTTAGCAATTTCAATTCTTCTGACACAAACACCCACTAAAGTAAAAAACTACCCACTTTCAATAAAGGCAAGTAGCTT TTGAGCAGAACACACAAAGTTTTGATGCAACCAAGAAAGGTAGAGAGAAAGAACCATTATTCATAACTACCAGAGCTAGG GAGGGTGCGATGGAGGAAGGTGGGTAGCAAAATGAGCCTGGGAGGAAAAAGGATACGGAAGCAAACTCCAGTAATCAGGA TGAAGAAAGCATGGCTCGAAGCTCTCACTCACTTGTCTCTGTTCAAAAAATTTGCCCTTTCTCTCTTTTTTTTTTTTTTT GGAAAGGGTACGCACCAGGTACGTACCGTACGCGTACCCGCAGCGTATGCGTACCGGGTACGTACCCGGTACCCGGTACG GGTACGCGGCCAAAACCGCCGTACCCATGCATCAGAGATAAGAAGTCACTTGTTTTATCACTGCTTGTATGTTTTCAACA CTGTTCTGAAATTTTTATCACTTGTTTCTACTCATTTTATGTTCCAATGCTTAATAGCCCATTTTATCTATTATTCTAAG TTACTTCTATGTATAATAATAAATTGCAGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGCGTAAGTTTTCCAAGCC TGTTATTTGATCTCTGATGTGAGATGAAGATACCAGCAGTCATATTTTTCTATGGCCATTCTCACTTTATAAGTCTCAAT TCTGTGAAATTTGAATAATGGGTCAGGGATTAATTATTATGTGTATAATCAAGTATTAAACAATCTTCATAAGAAGGCTT CAGAGTTAGCAGACATATTGACATGATGATATTAAAAGAAGCCTACTTTTGCAATTACTTGATGTATCTATTATTATTCA TTTGATATATCTGATGGAAATATGCTTTTACCTTGGATGTGAAGGCTGGTCTGTGTAGTGCAAGATGAAAATTCCAGTGA TCCTTTCTCTTCTCTTGATTTTTGCCTTCCACAGGGTGTTTCAGGTATGCAAGCTGTGAGCCTAAATCAACAAATCAAAA TATCACTGCATATGGTGTCCTGTTTTTTGTGAGTAATCTTTAAACATTTCATTCTATGAAGTATTGCTCATATATAAGTT CCATGACTATCAAGCAATGGTAGAACTTATCATCATCTTTTTTTTTTTCTTTCAATGAAACTTTTATGTCACTTTAGAGG CAATGGAGGATATTGCAGAATTTACCTTTGTTTAGATGAATTTGTAGCATGATTGAAGAGCATGCCCACTATGGTCCAGT ATAACTAACCTTTCAATTTTCAATGTAGGCTGCCTTGGGTTTCCTGCTTATTATCATATATAACTGTTCTGACCAAGTTA TTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCAGCAAGTGTGAGAGAATCACAAGCGCGTGAAAAA TGGAAAACTGCAAAAGAAACTGCCAAGAAGCATGCAGTTGGATTGCAATCACAATTATCGCGCACATTTTCTCGCAAGAA AACTTCAAAGCTAGATTTGAAAGGTTTTGGTTCTAAACATACAGACTTGCCACCTGTGGCACCAGCAGGTGCTAGTACAT CAAAAGGAAAGAAAAAGGACAAAAGCAACCTCACAAACATAATAAATGATATTGAGCAAGACCCTGATAGTCAAGAAGGC TTCAATGTTCAGATAGGAGATAAGAATGTCAAAAAGCATGCACCAAGGGGTAAACAATTGCATACTCAGAGCCAGATTTT CAAGTATGCATATGGTCAGATTGAAAAGGAAAAGGCTTTACAGGAACAAACTAAAAACATGACCTTCTCTGGAGTAATTT CAATGGCTAATGACATTGAGATAAGGAAGAGGCCAACCATTGAGGTTGCTTTTAAAGACTTAACCCTCACTTTGAAAGGG AAAAACAAACATCTATTGAGATGTGTGACTGGTAAATTACATCCCGGCCGTGTTTCAGCAGTCATGGGTCCATCCGGGGC TGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCACACAACTGGTCAAGTTCTTGTGAACGGCA AGGAATCATCAATGCGATCATACAAGAAGATCATTGGCTTTGTGCCACAAGATGATATTGTCCATGGCAATTTGACAGTG GAGGAGAATCTGTGGTTCAGTGCCAGATGCAGGTATAGCACTTTCTCTTGCATGAAGCTGGTAATTTTTTAGCTACTCTT ATTCATATGCATTGCAGATCAGAGGCTTAAGAATGCATTTTTTTTTGCTAATGAGTATTCTCCTTTCACTTTTTACTATA TCTATCTGCCATTGTAGACTCTCTGCTGATCTACCAAAAGAAGAGAAAGTGTTGGTGGTTGAAAGAGTCATTGAGTCTTT GGGCCTTCAGGCAATAAGGGATTCTCTGGTTGGGACAGTGGAGAAGAGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAA ACGTTGGACTGGAAATGGTTATGGAACCTTCCCTTCTAATTTTGGATGAACCCACATCAGGTTTAGACAGTTCATCTTCT CAGTTACTGCTTAGAGCCCTTAGACGCGAGGCTCTTGAAGGTGTCAACATATGTGTAGTCCTTCACCAACCAAGGTAATT TTGAATTAAGAAATAATACTTAGACACTCAAACAGTATAAACACTCGACATACACCCTATTTTTCTCTCTATCTCTCTAT ACTTATCATATTTATATCATATATCAAATCCATTATTTCTCTTTCTTCTCTTTGTCGGGTATCTGCACTATGCGGATGTT TGTCGAGTATCTGCACTATGCGGATGTCTAGAAATCGTTTTCCTGAAATATGAAAACAATTTTGCTATAGAGACCACGAC GCAACAGTTGTCACTTGTCCAAAATAACACTTCCCCTCTCTTTCTTGTGTGATCTCCAGTTACACCTTGTTCAAAATGTT TGATGATTTTATACTGCTTGCAAAAGGAGGACTTACAGTGTATCATGGACCTGTGAACAAAGTGGAAGAGTACTTTTCAA GCATGGGAATTGTAGTCCCTGACCGTGTCAACCCTCCAGATTACTATATTGATATTTTGGAAGGAATAATAAAACTAAGC GCAAGTTCAGGAGTGAACCTTAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTACCCGGTGCCTATGGATATGCT GAAGACTGTTGAAGGATTGACCACCCCAGGTGGTGATGGTTCAGCACATGGAGCAGCTACCCCTGGACAAGATGCTGGAG CATCTTCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGTGCAATGTTGAGATGAAGAGGGACACTCTTCAACTCAACTTC CTAAGTTCAAACGACGACTTGTCCGATAGGAAAACACCTGGAGCTTTCACACAATACAAATACTTTCTTGGAAGGTAAGT TACAACTTACAAGAGTGAGAATGTTTCAGCTAATTGTCAAAATTTGATTTTTGACTTCATCTTGGTTCCATGCAGAGTTG GTAAGCAGAGGCTAAGAGAAGCTAGAACACAAGCTGTAGATTTTCTGATTTTGCTGCTAGCTGGCCTCTGCTTAGGAACA CTTGCCAAAGTGAGTGATGAATCTTTTGGAGCAACCGGTTATACATACACAGTAATAGCAGTTTGTAAGTTTCATCTTTA CAATTGTTAGCTATACTATTACCAATTTTCCTACCTCTTTGTCATCTGATAATGTCTCACTTTCAGCACTCCTGTCCAAG ATTGCGGCTATGAGATCATTCTCAATGGACAAGTTGCACTACTGGAGGGAAAGTGCTTCCGGGATGAGTAGCCTGGCTTA CTTTCTTTCAAAGGACACGGTTGACCATTTCAGCACAGTTGTCAAACCTCTGTTTTATCTCTCAATGTTCTATTTCTTCA ACAATCCAAGATCAACTGTCACAGATAACTACATGGTTCTGCTATGTTTGGTGTATTGTGTCACTGGCATAGCTTATGTA TTGGCAATCTCCCTTCAACCCGGTCCAGCCCAGCTGGTGAGCACTAGATATTTCCAACCTTAGGTCGGATCAAGATCTTT TGTCTCCAAATGGTGTCTCAATTTCTTGTCTCACCAATAAAATCCTATCATGTCAATTGAAAAAGACATGAATAAGACAG TTACAAATTTACATCGTGGTTTTAATTGATACGTCAACATTTTATTGGTGGGATAGATAATGAAACACAATTTAGGGATA TAAGATTTCAATCTCCTTAGGTGATGAATGCCTTGCTCTTTCTAAGTTACAACCAATCTGTTGTGTCATGCAGTGGTCAG TGTTACTTCCAGTAGTTTTGACACTCGTAGCAACCTATGATAATGAAGAAGATAGCAGTATAGTGCGCTTTCTATCTGAT TTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCTAAAAGGTTTGACTTCTGATAATGTTCATGATG ATATATATCTCTAGATTTTCCTCATGAGCTGATGTTTGACATGATTTTTTTTGTAATGTAGATATTCTGGAGTTTGGTTA ATTAGTCGATGTGGTGCACTCAATTCATACGGCTATGATCTCAAACACTACAACTATTGTTTACTCCTCCTCGTTGTGAC AGGGGCTATTAGCCGCATGCTTGCATTTTTTTGTATGGTAACCTTCCAAAAGAAATAG
CDS sequence (LotjaGi3g1v0488400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTTCTCTGGAGTAATTTCAATGGCTAATGACATTGAGATAAGGAAGAGGCCAACCATTGAGGTTGCTTTTAAAGA CTTAACCCTCACTTTGAAAGGGAAAAACAAACATCTATTGAGATGTGTGACTGGTAAATTACATCCCGGCCGTGTTTCAG CAGTCATGGGTCCATCCGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCACACAACT GGTCAAGTTCTTGTGAACGGCAAGGAATCATCAATGCGATCATACAAGAAGATCATTGGCTTTGTGCCACAAGATGATAT TGTCCATGGCAATTTGACAGTGGAGGAGAATCTGTGGTTCAGTGCCAGATGCAGACTCTCTGCTGATCTACCAAAAGAAG AGAAAGTGTTGGTGGTTGAAAGAGTCATTGAGTCTTTGGGCCTTCAGGCAATAAGGGATTCTCTGGTTGGGACAGTGGAG AAGAGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGACTGGAAATGGTTATGGAACCTTCCCTTCTAATTTT GGATGAACCCACATCAGGTTTAGACAGTTCATCTTCTCAGTTACTGCTTAGAGCCCTTAGACGCGAGGCTCTTGAAGGTG TCAACATATGTGTAGTCCTTCACCAACCAAGTTACACCTTGTTCAAAATGTTTGATGATTTTATACTGCTTGCAAAAGGA GGACTTACAGTGTATCATGGACCTGTGAACAAAGTGGAAGAGTACTTTTCAAGCATGGGAATTGTAGTCCCTGACCGTGT CAACCCTCCAGATTACTATATTGATATTTTGGAAGGAATAATAAAACTAAGCGCAAGTTCAGGAGTGAACCTTAAACAAC TACCTGTTAGATGGATGCTTCATAATGGGTACCCGGTGCCTATGGATATGCTGAAGACTGTTGAAGGATTGACCACCCCA GGTGGTGATGGTTCAGCACATGGAGCAGCTACCCCTGGACAAGATGCTGGAGCATCTTCTTTTGCTGGAGAACTTTGGCA GGATGTGAAGTGCAATGTTGAGATGAAGAGGGACACTCTTCAACTCAACTTCCTAAGTTCAAACGACGACTTGTCCGATA GGAAAACACCTGGAGCTTTCACACAATACAAATACTTTCTTGGAAGAGTTGGTAAGCAGAGGCTAAGAGAAGCTAGAACA CAAGCTGTAGATTTTCTGATTTTGCTGCTAGCTGGCCTCTGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCTTTTGG AGCAACCGGTTATACATACACAGTAATAGCAGTTTCACTCCTGTCCAAGATTGCGGCTATGAGATCATTCTCAATGGACA AGTTGCACTACTGGAGGGAAAGTGCTTCCGGGATGAGTAGCCTGGCTTACTTTCTTTCAAAGGACACGGTTGACCATTTC AGCACAGTTGTCAAACCTCTGTTTTATCTCTCAATGTTCTATTTCTTCAACAATCCAAGATCAACTGTCACAGATAACTA CATGGTTCTGCTATGTTTGGTGTATTGTGTCACTGGCATAGCTTATGTATTGGCAATCTCCCTTCAACCCGGTCCAGCCC AGCTGTGGTCAGTGTTACTTCCAGTAGTTTTGACACTCGTAGCAACCTATGATAATGAAGAAGATAGCAGTATAGTGCGC TTTCTATCTGATTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCTAAAAGATATTCTGGAGTTTG GTTAATTAGTCGATGTGGTGCACTCAATTCATACGGCTATGATCTCAAACACTACAACTATTGTTTACTCCTCCTCGTTG TGACAGGGGCTATTAGCCGCATGCTTGCATTTTTTTGTATGGTAACCTTCCAAAAGAAATAG
Protein sequence (LotjaGi3g1v0488400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFSGVISMANDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTT GQVLVNGKESSMRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVE KRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICVVLHQPSYTLFKMFDDFILLAKG GLTVYHGPVNKVEEYFSSMGIVVPDRVNPPDYYIDILEGIIKLSASSGVNLKQLPVRWMLHNGYPVPMDMLKTVEGLTTP GGDGSAHGAATPGQDAGASSFAGELWQDVKCNVEMKRDTLQLNFLSSNDDLSDRKTPGAFTQYKYFLGRVGKQRLREART QAVDFLILLLAGLCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAAMRSFSMDKLHYWRESASGMSSLAYFLSKDTVDHF STVVKPLFYLSMFYFFNNPRSTVTDNYMVLLCLVYCVTGIAYVLAISLQPGPAQLWSVLLPVVLTLVATYDNEEDSSIVR FLSDLCYTKWALEAFVISNAKRYSGVWLISRCGALNSYGYDLKHYNYCLLLLVVTGAISRMLAFFCMVTFQKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 632 | 632 | 0.0 | – | |
| PANTHER | 1 | 632 | 632 | 0.0 | – | |
| Phobius | 1 | 401 | 401 | - | – | |
| CDD | 21 | 247 | 227 | 2.52039E-76 | – | |
| Gene3D | 22 | 259 | 238 | 6.5E-51 | – | |
| ProSiteProfiles | 23 | 264 | 242 | 17.627 | ||
| SUPERFAMILY | 24 | 262 | 239 | 2.89E-42 | ||
| Pfam | 42 | 192 | 151 | 2.3E-25 | ||
| SMART | 49 | 250 | 202 | 2.2E-10 | ||
| ProSitePatterns | 164 | 178 | 15 | - | ||
| Phobius | 402 | 419 | 18 | - | – | |
| TMHMM | 402 | 419 | 18 | - | – | |
| Phobius | 420 | 424 | 5 | - | – | |
| Phobius | 425 | 445 | 21 | - | – | |
| TMHMM | 426 | 448 | 23 | - | – | |
| Phobius | 446 | 456 | 11 | - | – | |
| Phobius | 457 | 473 | 17 | - | – | |
| Phobius | 474 | 478 | 5 | - | – | |
| TMHMM | 479 | 496 | 18 | - | – | |
| Phobius | 479 | 496 | 18 | - | – | |
| Phobius | 497 | 507 | 11 | - | – | |
| Phobius | 508 | 527 | 20 | - | – | |
| TMHMM | 509 | 531 | 23 | - | – | |
| Phobius | 528 | 532 | 5 | - | – | |
| Phobius | 533 | 550 | 18 | - | – | |
| Phobius | 551 | 606 | 56 | - | – | |
| Phobius | 607 | 630 | 24 | - | – | |
| TMHMM | 608 | 630 | 23 | - | – | |
| Phobius | 631 | 633 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi3g1v0488400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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