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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0488800 |
| Transcript ID | LotjaGi3g1v0488800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carbonic anhydrase, putative; TAIR: AT2G28210.1 alpha carbonic anhydrase 2; Swiss-Prot: sp|Q8L817|ATCA7_ARATH Alpha carbonic anhydrase 7; TrEMBL-Plants: tr|A0A151R4V1|A0A151R4V1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0488800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90664982..90667162) extracted from Lotus japonicus Gifu genome v1.2.
CCTTAATCCTTTGCAACACTATACTCCTCCTCATACGTACAATATCATAGCTACCAAAGTTGTTAATTGAAATGGCAAAG TTTGCTTTGCAGATTTTGATATGCTGTTTATCAGCAGCAATTGTTATGCTATCATGCCCAGCAATGTCTCAAGAAGTTGG TAAGTAAATGATGATCATTTTACTTAAAGCATGTTTGGATTAACTTATCTTTCTTCAGAATCAAATCTGACTCTCAAAAG TTACTTACAGAGGATGAGAGCGAGTTTAGTTATGATGTGGAGAGCGAGACAGGACCATTACATTGGGGAGACATTAAACC CGAATGGCATTCGTGCAAAAATGGATCAATGCAATCACCAATTGATTTGTTGAATGAGAGGGTTCAAATAGTATCACATT TAGGAGCGCTTCAGATGAACTACAAGCCCTCCAATGCAACTCTTAAGAACAGGGGTCATGATATCATGGTTAGTATAAAC TAATTAACAAGCTCAACAATATCTAATTATCAACAAATGATTGAACGTTGAAGAATTCATCTTTCTTTTTTTTTTACAAT TTCTTTGTGTTTGTGAATAGCTGGAATTGCATGATAACTCAAGCTATCTACAAATTAATGGAACTAAGTATGTCCTTAAA CAGTTCCATTGGCATTCTCCATCTGAACACACCATAGAAGGCAGAAGGTAGGTACATATGCACATTCTTGCTTTCTTAAT TCTCATGAATCACACTTCACATTTAAGTGATCTCTTCCTACGTTATGCTGAAATTCAACTTTTTTAGCAAGAACAAGGGT GCATGGGGTAGAACTCTGACCACTTTATCATCTCTGATATCTTGTCATGAACTGTAGGATGAAAATACATGAATACCTTT AAATTATATTTGTGACAAAATGTCCAATTTATTGCTATGTAGATTGGATCTAGAGTTACACATGGTGCATGAAACTCCAT CAGGATCACAAGCTGCAGTGATTGGGATGTTGTTCAAGACTGGAAGACCAGACCCTTTATTGTCATCGGTAAATCAAATT AAGATCCACACTTGAGTCTTACTACTATGTCTGTGAAAACTGAAAAGTGACATATATGCATGACTTATCTATATACCTTG AAATTTTCATATTGTCTAGTTAACAAATCACTTGGAGGCTATTTCTAATAGTACGGAAGCAGAAATAGCGGTGGGTGTAA TTGATCCAGGGCTAATCAGAATAGGGAGAACGCAATATTACAGATACAATGGCTCACTGACTACTCCACCATGCACTGAG AATGTTCCTTGGACAATAGTTAGAGAGGTTAATTTGCTAAATTTACCCTTTGCTAGCTGTATTTGGTTTATAAAGTTTCA ATTGGTTTCTTCTAAAATTTATACTTAATTTGTTAAACATGTCACAGGTGAGATCAGTTTCAAAGGAGCAAATTGAATTG CTTCGAGGTTCTGTTCATGATGTAAGTTGTTTTGATCGAGTTATGATATATACACACTTCTTCACTCCTTTTCCACCTTC ATTTATATCTATTTCTTTTTTCTATATCAATCAAATCACATATCACATCTTTACTTTCTCTCTCATTTCTTCCTATCTCT TTCTTCTTCCACTTTTTCATACCTCATTTTCTAGGTGTGAAAATATAATTATTGGTTTTAATCATATGGCTAAAGGAACT CTCAGAATTGGTTATCACAAACTAATCATAAATAAATTGAACATAGCAATTATTTTTTCCAACTTGATTAATAAGTCTGA TCAAAACAGAGAATCTGGTCAAAAACATGATTTAGAAAGTTTTAATATATTCCTAATCAACTTCGTAAGGTATTTTCTTT GTTATTATATATTAAAATATTAAATATTCAAATGTCAAATAACATGACATGATCGATGAAACAATTTTTTATGTTTTAAA CTGGACTCTACTTTGCAGGACTCGGATACAAATGCAAGACCATTGCAGCCAATAAACAACCGCATAGTGAAGTTCAATAA ACCGCAAGAATATCAACATTGAAATTTCAGGCCAGAAGATTATTTGTAATTTTAGTCAGATGATGAATAATGCATGTTCA CATGCACTAGGTTAGGTGATTGTTATTGATCATTATTCATTGCTACATCACATCTATTCTTCTATTATACATGGTTTTAA GGATTTTATAATTTATTTTCA
CDS sequence (LotjaGi3g1v0488800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAGTTTGCTTTGCAGATTTTGATATGCTGTTTATCAGCAGCAATTGTTATGCTATCATGCCCAGCAATGTCTCA AGAAGTTGAGGATGAGAGCGAGTTTAGTTATGATGTGGAGAGCGAGACAGGACCATTACATTGGGGAGACATTAAACCCG AATGGCATTCGTGCAAAAATGGATCAATGCAATCACCAATTGATTTGTTGAATGAGAGGGTTCAAATAGTATCACATTTA GGAGCGCTTCAGATGAACTACAAGCCCTCCAATGCAACTCTTAAGAACAGGGGTCATGATATCATGCTGGAATTGCATGA TAACTCAAGCTATCTACAAATTAATGGAACTAAGTATGTCCTTAAACAGTTCCATTGGCATTCTCCATCTGAACACACCA TAGAAGGCAGAAGATTGGATCTAGAGTTACACATGGTGCATGAAACTCCATCAGGATCACAAGCTGCAGTGATTGGGATG TTGTTCAAGACTGGAAGACCAGACCCTTTATTGTCATCGTTAACAAATCACTTGGAGGCTATTTCTAATAGTACGGAAGC AGAAATAGCGGTGGGTGTAATTGATCCAGGGCTAATCAGAATAGGGAGAACGCAATATTACAGATACAATGGCTCACTGA CTACTCCACCATGCACTGAGAATGTTCCTTGGACAATAGTTAGAGAGGTGAGATCAGTTTCAAAGGAGCAAATTGAATTG CTTCGAGGTTCTGTTCATGATGACTCGGATACAAATGCAAGACCATTGCAGCCAATAAACAACCGCATAGTGAAGTTCAA TAAACCGCAAGAATATCAACATTGA
Protein sequence (LotjaGi3g1v0488800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKFALQILICCLSAAIVMLSCPAMSQEVEDESEFSYDVESETGPLHWGDIKPEWHSCKNGSMQSPIDLLNERVQIVSHL GALQMNYKPSNATLKNRGHDIMLELHDNSSYLQINGTKYVLKQFHWHSPSEHTIEGRRLDLELHMVHETPSGSQAAVIGM LFKTGRPDPLLSSLTNHLEAISNSTEAEIAVGVIDPGLIRIGRTQYYRYNGSLTTPPCTENVPWTIVREVRSVSKEQIEL LRGSVHDDSDTNARPLQPINNRIVKFNKPQEYQH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 22 | 22 | 5.0 | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 4 | 18 | 15 | - | – | |
| PANTHER | 5 | 271 | 267 | 2.8E-119 | – | |
| PANTHER | 5 | 271 | 267 | 2.8E-119 | ||
| Phobius | 19 | 26 | 8 | - | – | |
| Phobius | 27 | 274 | 248 | - | – | |
| Gene3D | 31 | 273 | 243 | 1.5E-83 | ||
| ProSiteProfiles | 33 | 268 | 236 | 50.173 | ||
| SUPERFAMILY | 34 | 264 | 231 | 8.24E-70 | ||
| Pfam | 36 | 265 | 230 | 5.7E-48 | ||
| SMART | 37 | 268 | 232 | 1.3E-74 | ||
| CDD | 44 | 266 | 223 | 1.75921E-95 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Carbonate dehydratase activity | Catalysis of the reaction: H2CO3 = CO2 + H2O. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0488800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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