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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0491200 |
| Transcript ID | LotjaGi3g1v0491200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metal tolerance protein; TAIR: AT3G58810.1 metal tolerance protein A2; Swiss-Prot: sp|Q9LXS1|MTPA2_ARATH Metal tolerance protein A2; TrEMBL-Plants: tr|I1LJX9|I1LJX9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0491200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90909500..90914079) extracted from Lotus japonicus Gifu genome v1.2.
AGTGATCATATTCATTTTGACTTTCCTAAAATGAAAAATTAGTAAAGTAGTATCATGGTGGGATGGTGGTACCACTACAA ACATGTCGTGTTGTCATGAAGAGACACAACCCATTACCAGCCCGAAACAGTTCTCTTACACCAGAGATTAGATTAGGTTT TAGTCTATCCCAATTCTCTCTGTCGGAAATCCATATCCATAGGGTAGTTTGTTGTTAGCAGCTGACTCTGCCCCCTTGGA TATTCACCGGGACAACATGCCGTCGTTAACATCAACAACGAATCTCTGAGTTGCGTCGTGTTGTCCCGTTAGATTCCCTT TTTTTTTTTTTTTATAATTTTTCGAATCTTCCAACGTAGCCCCTCGTTCCCACTTGAGCTACAAAGTTTCTGAATTTCCA ATTCAATTTTGTCTCCCGGCTGCTCATTACTTCCATCAATTGCTTGTCCTGGTACGATTTCTTTATTTTTTTCTCACCTC TTTGTTCATTTTGCAACTTTATATTTGTATTTTACTCACCAAGAATATTCAAAATGCAATTTATTCTTTAATTTTGGACA TAATTTGTGTGTTTTGTGAAGGCCCAGTTTGTTTGTTGAAGCCTATGGAACCTGAGAAAGCCTTAGTCTTGGAAGCAATT TCCATGGAGGAAATTGGGATCCCAATTGTCTCTGAGAAGGTTGAGATTCTTCCTATGACAAAGGGACTGTCTTGCAATTC TGTATGTGCTTTTTCCAGACAGGAACACAGTGTTTTGGCATCTAAAGAGTCATCAAAGTCAGCAAGGAAACTTTCTTTAC TCATAGCTTTCTATGCTGTTGTTATGGTTGTGGAAGTTATAGGGGGTGTAAAAGCTCACAGTTTGTCTGTCATCAGTGAT GCTGCTCACTTGCTTTCTGATATTGCTGGGTTCTCTGTCTCTCTCTTTGCAGTGTGGGCTTCGGGTTGGGCGGCGACGCC GCATCAATCTTTTGGGTACAATCGTCTTGAGGTTTTGGGTGCCCTTTTATCTGTGCAGTTTATTTGGATGATATCTGGTT ATTTGATATATGAAGCTGTTGGTAGACTTCTTCACCAAAATGAAAGGGTGAATGGAATGCTCATGTTTGCAATTGCAGCA TTTGGGTTTGTTCTTAACCTTATCATGGTTGTATGGCTTGGTCATGATCATCATCATGGCTTTGGAGGGAATGATCATTG TCATCATCATCATCATCATCATGGGTTTGGAGACTCAGATCATGGACATGATCATGATGATCATGGCCATAGTCATAGCC ATAGCAATAGCAATAGCAATAGCCATAGCCATAGCCATAGTCATAGTCAGTTCTGTGGAGACTCAGATCATGATCATGGG ATGGAGGAAGTGGAGCTAGCTAAATTGACTGATGAGGAGGAGAACCTGAGCATGCTTCCAGGTAGCCAGAGAAATGTTAG TGTCTTGAACTTTAATCTCCAAGGGGCCTATTTGCATGTCATGGCTGATATGATTCAATCTATTGGAGTGATGATTGGCG GAGCTGTAATATGGGCAAAACCAGAGTGGTTTATAGTTGACCTTCTATGTACTCTCTTATTCTCTGTTTTGTCCTTAAGT ACTACTGTACCCATGCTTAGGAATATATATGGCATTCTGACAGAGGGTGCACCTAGTGAGATCAATGTCATTCAGGTAGA AAATGGTCTTAGAAGTATTAAGGGAGTGCTGGATGTCCATGACTTGCACATTTGGGCCATAACAGTTGGTAAAAATGTTC TGTCTTGCCATGTAGTAGCTGAGCCTGGCATCAACTCTGTTGATTTACTAGGCACCATTAAGCATTACTGTGAAAAATCA TATCAAATACAACATGTAACCATTCAAATTGAGTAAGGCTACGTTCCTTTTGCTACTTGATTGATGCATCCTCATATAGA TTTTCACAATACTTGCTTTATTCTAACCTGTTATGACAGTAAACGACTCAAATACATGAAAATGCAAACACTTCAAGGTC CTAACTCATTAACAAAATAAAAATTGTGGCAGTTAAATTAACAAGGAATCACTAGCCAATTACTTCAGTTGTTCTTGGAA CTATGCATTTGCAGATTATGTGCTCAATTTTACTTCCAGCAGTAGCTAACGGATTTGTATGGTGAAAGGAGAAATTGCAA ACGAGATGATCATAGATTTTGTCAAGCTCTCTCAAATGGTAGCCTATTAACAACAAATTAACAAAAACCAGACGAAAGTA TAACATGACCTCTCTGAAATGTCAGATTCCCATTAACCACGCTATATAACAAATATCCGTCAGTGCCAATATTACATCAA TTCACGAGAAATTAAAATTATCATAATACGAAAGAAAGAAACTAAACACTTCTGGTTTTTAAAATTTCACAAGCTTCCTC ATTGCAACTCAAAGAAGTAAATGTACTCTACAAGTTTCTCTCTCACCCATTAAGAACAAAAATAAGAGAAAGGGGTAAAA CAGAATTGGGGGGTAAAAAAATACTATCCGCTAGCAACGGTTTTTCCACAAAATGTCACATCAAGTGGAACAGCAACCTT TCTTTGTGTTCCCAGAAGTATCAGCAACATTGATAGTGGTTCCTTGACCAGGAACTGAGGCACCAGCAGTTGCTTCCTGA GCAGCAAGTGCTTTTTTGCTAACAATATGGTAGATTTCTGTCAATATGGTTTGGAATGCCTTCTCAATGTTGGTTGCTTC CAGTGCAGATGTCTCAAGAAATGAGAGACCTTCCTTCTCTGCCAACGCTCCTCCGTCATCCTCCGAAACAGCTCTAAGAT GGTTCAAATCAGATTTATTTCCAGCCATCATGATAACTATGTTAGAATCCGCATGGTCCCTCAATTCACGCAGCCACCTC TGGACATTGTCAAAGGTTTGCCTCTTAGTTATGTCATATACAAGGAGAGCACCAACAGCTCCTCTGTAATAAGCACTGGT AATGGCGCGATATCGCTCTTGACCTGCTGTATCCCAGATCTGTGCCTTAACAGTCTTTCCCTCTACCTGCACAGTAAGAT AAAGAAACAACCATCAGCAATGCTGTCAAACAAACAATGACCAATATATAAAACTCTGCACATCAGCATATTCAAAGCAC ATTCAACAAAACAACAAAATTCACTCTCAGCAACCACAATGTAACATTAATTTATGTTTTTACACTTAAGATCAATGCAT TCAAATCATTTGTTCAACGCCAAATCTGAATTTCATCTAAGAAGCAACCTATCCATAGATAAAACTCAGCACATAATCAA ATTCAAAACACATTCAACACAACAACAAAAATTCACTCTCAGCAATAGCATCCACCATATAACATTAGTTTTATGTTTCG ACTCTTGAGATCAATGCAGTCATCAGTATTCGACACCAAATCTGAATTTTCATCTAAGAAGCTGTCTATCTTTAGATAAA ACAAATCAGGCCTCCAATTGATCACATGAACACACACAACATTCGAATTGCAGTCACAGTCAAGTCACAAACTGAGATAG TAAAAAATCCTGAAAAAATATTACCAATGTGGCCATAATTATGATCACTAAGACCTCAAAACTGTGATTTAAAACCTTGA TAACAGCACTTAAAGCTAAAATCATCATTCCTACAGCACACTTAGTTCCTCCTCAGAAGAGGATCTGAACTAAACGTTCT AGCTTCTAACCAACCAATGCTTTTGAACAACAATACAAAACAAAACAATAGGAATAAGTTGATCAAACTCGAAAACCTAT AAATGCAAACACCTTCGTATCAGGAAAAATAGCATGACGAAATCCAGAAATTTGAAAGGCAAATGATCATTCAACGATTA ACACATTCACAGAAGGAGTAATTAGGAATACCTGAAGAGTCCTGGTGGCGAATTCAACACCAATAGTAGATTTGGACTCC AAGCAGAACTCGTTCCGAGTAAACCTGGAGAGGATATTGGATTTGCCGACACCAGAGTCTCCGATCAAGACGATCTTGAA GAGATAGTCATACTCATGGTCCACCCTGTGCGCCATAACTTCTTCCCCTCTCCGATCTCTCGAACCTGCCAGATCCACCA CCGAAGATTCATTCAGATCCATCACAAGCACGTAACAGAAAAACAAAAACGCGCAATCGAAACGAAACAACAGATCTAGG AACTGAATCGGAAAGCAAAAGAACTCACCGTGAAATGGATTGATTGATGAGAGAGGAAACGAATTGAGATGAATGCGTTT GGTGAAGGTTTTGCTTGTGTGAGTGAAGCGAACTTGAGAGACTGTAATAGGGAACGGTTGGGGTAACTGCACGAACCGGA GGGTGGAGAGGAGGAAGAAGGAGAAGAAGAAGGGTGGCCGAATTGGCCAATGGGGGGAGAAAACGGAAATATCGATGAGT GAGAAAGCACTTGGAAAGGCGAATAAATAAGGATCAATTTTTATTTTATTTCTTTTTAATTTTAATTAATTGACAGCAAA AGGGGGTTTCTTTTTAATTTACTTGTCGTTATTATTATTATTATTATTGAGTGGTATAATTTCAAAAAATAAAAAGAATT AGGAGGAACGGCGTCGTGTT
CDS sequence (LotjaGi3g1v0491200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCTGAGAAAGCCTTAGTCTTGGAAGCAATTTCCATGGAGGAAATTGGGATCCCAATTGTCTCTGAGAAGGTTGA GATTCTTCCTATGACAAAGGGACTGTCTTGCAATTCTGTATGTGCTTTTTCCAGACAGGAACACAGTGTTTTGGCATCTA AAGAGTCATCAAAGTCAGCAAGGAAACTTTCTTTACTCATAGCTTTCTATGCTGTTGTTATGGTTGTGGAAGTTATAGGG GGTGTAAAAGCTCACAGTTTGTCTGTCATCAGTGATGCTGCTCACTTGCTTTCTGATATTGCTGGGTTCTCTGTCTCTCT CTTTGCAGTGTGGGCTTCGGGTTGGGCGGCGACGCCGCATCAATCTTTTGGGTACAATCGTCTTGAGGTTTTGGGTGCCC TTTTATCTGTGCAGTTTATTTGGATGATATCTGGTTATTTGATATATGAAGCTGTTGGTAGACTTCTTCACCAAAATGAA AGGGTGAATGGAATGCTCATGTTTGCAATTGCAGCATTTGGGTTTGTTCTTAACCTTATCATGGTTGTATGGCTTGGTCA TGATCATCATCATGGCTTTGGAGGGAATGATCATTGTCATCATCATCATCATCATCATGGGTTTGGAGACTCAGATCATG GACATGATCATGATGATCATGGCCATAGTCATAGCCATAGCAATAGCAATAGCAATAGCCATAGCCATAGCCATAGTCAT AGTCAGTTCTGTGGAGACTCAGATCATGATCATGGGATGGAGGAAGTGGAGCTAGCTAAATTGACTGATGAGGAGGAGAA CCTGAGCATGCTTCCAGGTAGCCAGAGAAATGTTAGTGTCTTGAACTTTAATCTCCAAGGGGCCTATTTGCATGTCATGG CTGATATGATTCAATCTATTGGAGTGATGATTGGCGGAGCTGTAATATGGGCAAAACCAGAGTGGTTTATAGTTGACCTT CTATGTACTCTCTTATTCTCTGTTTTGTCCTTAAGTACTACTGTACCCATGCTTAGGAATATATATGGCATTCTGACAGA GGGTGCACCTAGTGAGATCAATGTCATTCAGGTAGAAAATGGTCTTAGAAGTATTAAGGGAGTGCTGGATGTCCATGACT TGCACATTTGGGCCATAACAGTTGGTAAAAATGTTCTGTCTTGCCATGTAGTAGCTGAGCCTGGCATCAACTCTGTTGAT TTACTAGGCACCATTAAGCATTACTGTGAAAAATCATATCAAATACAACATGTAACCATTCAAATTGAGTAA
Protein sequence (LotjaGi3g1v0491200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPEKALVLEAISMEEIGIPIVSEKVEILPMTKGLSCNSVCAFSRQEHSVLASKESSKSARKLSLLIAFYAVVMVVEVIG GVKAHSLSVISDAAHLLSDIAGFSVSLFAVWASGWAATPHQSFGYNRLEVLGALLSVQFIWMISGYLIYEAVGRLLHQNE RVNGMLMFAIAAFGFVLNLIMVVWLGHDHHHGFGGNDHCHHHHHHHGFGDSDHGHDHDDHGHSHSHSNSNSNSHSHSHSH SQFCGDSDHDHGMEEVELAKLTDEEENLSMLPGSQRNVSVLNFNLQGAYLHVMADMIQSIGVMIGGAVIWAKPEWFIVDL LCTLLFSVLSLSTTVPMLRNIYGILTEGAPSEINVIQVENGLRSIKGVLDVHDLHIWAITVGKNVLSCHVVAEPGINSVD LLGTIKHYCEKSYQIQHVTIQIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 215 | 215 | 3.9E-180 | – | |
| Phobius | 1 | 62 | 62 | - | – | |
| PANTHER | 1 | 215 | 215 | 3.9E-180 | – | |
| SUPERFAMILY | 58 | 347 | 290 | 5.75E-44 | ||
| Gene3D | 59 | 194 | 136 | 1.4E-19 | ||
| TIGRFAM | 60 | 423 | 364 | 6.2E-79 | ||
| TMHMM | 63 | 80 | 18 | - | – | |
| Phobius | 63 | 80 | 18 | - | – | |
| Pfam | 65 | 344 | 280 | 2.7E-38 | ||
| Phobius | 81 | 99 | 19 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 100 | 118 | 19 | - | – | |
| Phobius | 119 | 129 | 11 | - | – | |
| Phobius | 130 | 149 | 20 | - | – | |
| TMHMM | 130 | 149 | 20 | - | – | |
| Phobius | 150 | 163 | 14 | - | – | |
| TMHMM | 164 | 186 | 23 | - | – | |
| Phobius | 164 | 185 | 22 | - | – | |
| Phobius | 186 | 287 | 102 | - | – | |
| MobiDBLite | 198 | 246 | 49 | - | – | |
| MobiDBLite | 209 | 225 | 17 | - | – | |
| PANTHER | 214 | 423 | 210 | 3.9E-180 | – | |
| PANTHER | 214 | 423 | 210 | 3.9E-180 | – | |
| MobiDBLite | 226 | 240 | 15 | - | – | |
| TMHMM | 288 | 310 | 23 | - | – | |
| Phobius | 288 | 310 | 23 | - | – | |
| Phobius | 311 | 315 | 5 | - | – | |
| TMHMM | 315 | 332 | 18 | - | – | |
| Phobius | 316 | 338 | 23 | - | – | |
| Phobius | 339 | 423 | 85 | - | – | |
| SUPERFAMILY | 350 | 423 | 74 | 3.14E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0491200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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