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LotjaGi3g1v0494500.1

Overview

Field Value
Gene ID LotjaGi3g1v0494500
Transcript ID LotjaGi3g1v0494500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|A0A151TVN5|A0A151TVN5_CAJCA Zinc finger A20 and AN1 domain-containing stress-associated protein 8; Found in the gene: LotjaGi3g1v0494500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:91264456..91270406) extracted from Lotus japonicus Gifu genome v1.2.

GGAAAAGTCTTAAATTGAATCACTTGTTTGAAATTCGTGCCGTAGAATAACTAATAAACAAAGATGAAATAGAAGTGTCT AAAATGCGAAGCAAACGACTGATTAACTAATAAGAAGATTGGTTAGCGAAACCTCAAATTCACCAAAACATAAAAGGGGA CAGTTTTACGGTGTCTAATAAATAGTAGCTAAGTTACTCTACAGTGACCGCGATCATGAGCGTCAATTTCCGCTCACACG TTCTCAAAAACTTCTTTGTAAACAACATTAAAAGGAAAATTAGCTTGTACAGTGAACAAATAAAAGTGAATACATTATTT AATGGGAATAAAATAAAGGTAAATATCCAATGGTAACAATGTTAATGTGAACCTTCTCCTCTATCATGACTTCTTGAATT GTAGAACATAATCCAAAGATTTTCAAGTCAAAAAATTACAGCAAGAAACTAATTCAAAAGGGAAAAGAGATCAGCATGAA AGTACGCCCCTTGGGAGCCATTTTTTACAGAGATATGTAAAGCCTAAACATGTAAATGAAGACTTGACAATCTGAAGATA ATTAAGAGGTGTGGAAAGATAAAGGCTAAAAATAATTTCCAAGCCCACATGTACCCCAGGATCATATGACTTTTATTATG TAAATGAGATTTTAACATAAATCATTCATGCATATATCAATATGTAGAAAAGAAAAAAAAAAAGACTAAAGAAATAGAGG CTCTTAGAGTTTCATTTATAAGCCAACCGGAACTTGATGCCACTGCTGCTCTAATACCGATGCCAACAATATAAAACTGA CTGCTAATCATAAATAAATAAGAGTAAGAATGGTAATAGCTTGAAATGAAAACCAAAACATAAAATTCATAAAAACCCAA CAGGGAACAAATCAAGGAAAAAATATTACTTCTCGTTGACATGGATAAATATATCAGCCAAGATACCTTATAATTCCCCA AAACTGTTCTGACATGGATAAATATATCAGCCAAGATACCTTTAGTACTTATCAACTATACATTCTTGCAAGACATTCAA CTTTCTACTTTTTAGCTGTATATAATTTCATTTATATTATTGCTCAATATAGGCTGCAAAAGATAAGCTGCAATATGCAG CTAGAAAGGGCAATTTCTTAAGTATGCAAAAACAACCATGTAAAGAGGAGCTGTGCAGATAGAAGAAGCAAAAACAAAAG GATTTTTGTTAATTTGAATTTTTATAATGGGACTGTTTGACAGGCAAGAAAGGAAAAAATTGCAATTAAATTTGAATTTT GAAACAAATTTTCTTGGAAATAAGCAGCTAGAATATGAAGGGGTGCATTTTAACCGGGCAGCTGTTTGGAAATTGGAAGT AAAAGGTTGTAACTGTCACATGGGGTGGAAAGAAAGTAGTGGGAATGTAAAGATTCAAAAATACCCTGTCTTTTCTTTTT TACCATACACACAATCTAGAGTTCTAATCAAATCCATTAGAATCAGCAAATCACTTTATCTAAGCTTCTACACCTCAAAC TTCTTATAATATTAGTTTTTAAGTGTTGTGCAGTTACTTATATTCAAGTTGATACATATCAGTGGTATTCTTCCTCACTC CTCAGGAACACAACATCAAGATTGTAAAAAGAGAGTATATACCTTACTTGTAACACTGCCTTATAATAGATGAAACCAAA ATCTTCCAATAGTAACTTCCCACGTCGCCACATTTCAGTGAAAAAACAGTTCGTTGGCACAGAGAGAGAGAAAAAGAAGC AGCAATGCAATGCAAAAGGCCCCTTGTATTTAAATACCAAACACTGACACACACAAACGACGCATCCATTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTCGGCTTCACTTTCTCTCTCCTCTTCGATCCCAAATCTACTAGGGTTAGG GTTTCGTTTCCAATTGTTCTATTTCACGCGTTAATCCCTTGTTGTTTTCGATTATGATTCATCCATGGATTCTGATTGTT TTTTTGGTGATTCCAGGGCTCGTATGCGATGCGATTCTGAGCTTGTAGATCCGTGTCGAGGTTTCGTCTCCCTGATTTTT TTGTAATTCCTTTCCTGCCCCTATCAGGTGAGATTATCCTTCATCGTACAATTTTCGCACCCACGATTCTTTTGTGTGTC GATTACTCGATTTGTTCGTAGTTGTTTTGTCTGGTTTTTTTTAATTGTCTTGTCGTGTGTGAAGGAATCTGAGTTATGTC GGGTGGAACTAGCAAGTTATTTCTGCAGATATGGACAAAAAGTTGAGGCATATAGTCTTTTTTCCCCGCATGCCATGGTG GTGTGTTATTCGATTTAATCAATTTATATTCAATTTATCAAAATTCAGTGCCGAGCCCCAAAAGTTTGGTGTTTAAATTC TGGGTATATAATCTGATTGGCTGGACTTGTCTGTTGCTATTAATTTAGTCTTTGATAGTCTTCAAATGCGTTTGGGGTTG GGGTTTGTTATTGTGTTTCTCTGATCAATAGTTTCTGAAGTTTGTTGGTCAATAGATGGATGGTATGATGTTAAATGATT GCAATTTTCCAGGAATTTTGCTAATAATGGTCTAAATTTCTTTACAGTGATGATTAGTTTTGATCATGAAAGTTTTTCCT GTTGGAGTTTTGGTAAAAGAATTCATGAGTTGTTCTTACTAACATAGATAAGCATGTGCCTATTTTTTTTTATTGCATAT GACCTTGGAATAAGTGGGGTTTGATGTATCAAGTGAACAGGCTTTGAGCAGTAATTGAAATCAGTAAAGCATATATGCAT TTGAAAATAAAGCTATTTGTTATCGAAATCAAAGCTGGTACTATCCTTTTTGTGATACATGCTGATTGAAATTGATTTTC TGTAAAACATTTACCACTACATGCTATTCAATGTGCACCCTTAAGCCCTTTATATTTGCGCCTTGGCTTTTTCTTCTATT GGCAGGGATTTGTATGGTGTAGAGTTATTTCTTATTGACCCTTTTAAGTTGCATTCTGTACAAACTTGTGAAAAATAAAT CAAATAATGTTTCATAACCAATATTGCCACTTTGGTTGTTTAAATTTTGCTGATAATCTATCTGATCTTTTGTGATTCAT TTTAGTAGCTTGAGCTTGTGAAGTTGACACAACCATGTACCTAGTTATTTGATGTTTTTGAAGTTTTCACTCATTTCTTG GTTTACGACTTCATTTTGAAATTTGATGGGGTTTGTCTGTTTCTGCACCCCTGCATATGCATGCTTAATGAAATGCAAGA CTCTGTATGTGTTATTTTTTTGTTTAAGTGCATGTGTAATGTGTCCATGTAGAAGTTGTTCTGCCACTGCTTTATATCAA TTGATTGATTTATAATCATCATGGTAGTTCAAATGAGGAGTCACCGGTAAGATTGCATGATCTTACTATTGTTGCTGCAG CCCATAAACTAAAAGCTTGGAACTCAATTTGGTGAAATTTCAGTCGGTTCCTGCAATCCATCATACCTGAAAAAGAACCA AAGTTTGAAGGAAAAAAAAAACCTTCTGCGACCTGATTGCTGACAAATTCTGATAACTATTTATGACTTGTTTGAGTGCA ATTGAAACAGTGGCTACCCCCATTCTTCTCTTTCTTCGGTTCGGCATTTGCCCATTCCTCACTTGCATAGGCATTTGTCT TCTTCCCGCTGGTCTTGTCGGTGTCGACTTATCTGGTGTTCTCTTCTCTTTGATTCTTTGTCTACTGCGAGCCTTTCAGC ATCATTTTGCTGGTTCAACCTATTCTTCCTTGCTCTCTCAAGTTTCTTTTTCCTCTTTGAGCTCCGCTTAGTTCTTTCTG CTGCTGGTTGCTTATCAGTGCCATTTCTTTGAACTGGTGGCTGAGTTCTGGGTGCTACTTCTTCATCCTCTTAGTGTGCG ACTATGAACTAGTCTCAGTTTGCTGCTAGCTGCATCTCTCTGCCGTGTGAGGTGAAGGATTGAAGGAAGCGCTGTGCTCT ATTTTTTGTGTGGGATTTGGTTCTGTTTTGACAAAGATGTCTTAAGAAGAGGATTAGCTTAATTTTAATTAAGTATTTGT GGTGATTTGAAGTCTTTTTGTTCTTATTTATGTCCTTTTATATGCATATATATGAATTTAAACACATAAGATCTGTGTTA CGATTCCACAATGTTTCATTTCCACTCCTCTTTCCAATCCTGGGATAATCTTTATTTTAACTACCTTGATAATCATATCA GGACACTCGGTATGCTTAGGAGTTGCTACTTGTTTTTTTTATTGTGGACTTATTGATCTATTGAACTTGGATTGATCTTG GTTCTGCTTAGTGCAGGAAAATTGTAAAAGAGAAAAATGGACCATGAAAAGACTGAATGCCAAGCTCCTCCAGAGAGTCC CATGTTGTGCATCAACAACTGTGGATTTTTTGGAAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGG TGCTGAAACAGGAGCAGGCCAAGCTTGCAGCAACCTCCATCGGAAATATTATGAATGGATCATCAAGCAGCATTGAAACT GAGCCGACTGAACCTGTTGTTGCTGCCAGCGTGGATATCCCAGTTATTTCAGTAGAGCCTAAAACTATCTCTTCACAACC TGTATTTGGTTTTGGTTCTGGTTCAGGGGAGAGTGGTGAGGAAAAGCCAAAAGATGGTCCTAAACGTTGTAGCAGCTGCA ATAAACGGGTTGGTTTGACAGGGTTTAACTGTCGATGTGGTCATCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCAC GATTGCCCATTCGATTACCGCACCGCTGCACGGGATGCCATTGCTAAAGCAAACCCCGTTGTGAAGGCTGAGAAGCTTGA TAAGATCTAAGATCTGATGTCTTGATGTTTCATGCCCTGAGATGATGTTATGCTCAAATTCATCATGCCCAAGTTTCCTG CACATTTTATTGGTGTTCTTATTATATTGTTATATGTGTGGTGAGGGACTTGGTGTTATAGGACATCTCTGCAAGTTGAA GTACTCTTTCATGTGATTGGCGAAAATATATATGTTGGCCCTGGTGTTAAGTTTTTAAATCTGTGCTGGTGTGGTGGATG TTGGTGTTAGCTTTGTAATGCATCTATTCTGTTTCAGGATGGTATTTGCGATTTACAGATGATTTCAAGAGCATCCGTGG ACATGTGGTTAGATTGTAATTATTCTGGGCTATCTATGATTTTCTTTGGATCTTGTAAACAATGGGATTTATCATTATCT AGGTTTCAGTTCAATTTGAAGTACAAAATAAACGGTTTTTATACGTTTACAGGTTTCGAAGCTTTACTTTTTTTTCAACT CATTTTTATCTTCCACTCTTTCTAGTTCTTTCATTTTATCTAACATTAATATCATATTTATATTTTTTCTCGCTTGACAT TTTTTCCCTGGATGTGGGAATTTGAGGTGGGAATGAAACTTTATTGAAATAAATAAGTAAACAATTGTGTTTAACTGTTG CTAGGGGAAATTGAGGAGTGGTGAGTGCTATAATGATAAATTTTAGAGGGGTCAGTGCAATAATAATAAACTTTAGGGTA AGTCTGTGCAATGTTTCAAATTAGAGTAATTAGTGTCTTATTAAATTAAAGAAATGTTTCAAAAAAAAAATTAAAGAAGA GAGGCAACACAACAAAGATAAACATCACGAGACATCAGTCTCTTAGAAAGGTTGGGACTTGGCTTTAGTGTTGAGTGTGT TATAAATCTTGCTGACAGAGGGAAAACGTATTTTAGTATGTACCAAATTGATGCGGTAACCAGGTTTAAGTCGGCGCAGC CTTTTTTTTTTTTCTATTGTTATTGCCATTAAACCAGGCCCAGTAAGAGAAGGGGACTAGAAAAATCCCAGAACGCTAAC CCAAAAGATAGAAAAACCCACAATTCGTATC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0494500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGACCATGAAAAGACTGAATGCCAAGCTCCTCCAGAGAGTCCCATGTTGTGCATCAACAACTGTGGATTTTTTGGAAG TGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGGTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCAACCT CCATCGGAAATATTATGAATGGATCATCAAGCAGCATTGAAACTGAGCCGACTGAACCTGTTGTTGCTGCCAGCGTGGAT ATCCCAGTTATTTCAGTAGAGCCTAAAACTATCTCTTCACAACCTGTATTTGGTTTTGGTTCTGGTTCAGGGGAGAGTGG TGAGGAAAAGCCAAAAGATGGTCCTAAACGTTGTAGCAGCTGCAATAAACGGGTTGGTTTGACAGGGTTTAACTGTCGAT GTGGTCATCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCACGATTGCCCATTCGATTACCGCACCGCTGCACGGGAT GCCATTGCTAAAGCAAACCCCGTTGTGAAGGCTGAGAAGCTTGATAAGATCTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0494500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDHEKTECQAPPESPMLCINNCGFFGSAATMNMCSKCHKDMVLKQEQAKLAATSIGNIMNGSSSSIETEPTEPVVAASVD IPVISVEPKTISSQPVFGFGSGSGESGEEKPKDGPKRCSSCNKRVGLTGFNCRCGHLFCAVHRYSDKHDCPFDYRTAARD AIAKANPVVKAEKLDKI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10634:SF88
1 176 176 6.1E-104 –
PANTHER
PTHR10634
1 176 176 6.1E-104 –
ProSiteProfiles
PS51036
12 46 35 9.757
IPR002653
SMART
SM00259
15 39 25 2.8E-8
IPR002653
Pfam
PF01754
16 39 24 5.6E-12
IPR002653
SUPERFAMILY
SSF57716
17 53 37 8.84E-13 –
MobiDBLite
mobidb-lite
95 116 22 - –
Gene3D
G3DSA:4.10.1110.10
101 173 73 1.5E-27
IPR035896
SUPERFAMILY
SSF118310
106 172 67 1.03E-29
IPR035896
ProSiteProfiles
PS51039
115 158 44 12.321
IPR000058
SMART
SM00154
118 155 38 7.6E-17
IPR000058
Pfam
PF01428
118 154 37 1.1E-9
IPR000058

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0494500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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