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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000058
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We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.575s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0338579.1
n.a. A20/AN1-like zinc finger family protein [Arabidopsis thaliana] gi|15235819|ref|NP_194013.1| chr0 177290855 177291901 -
5 domain predictions
1 GO term
Lj1g3v3833900.1
n.a. Zinc finger A20 and AN1 domain-containing stress-associated protein [Medicago truncatula] gi|357512275|ref|XP_003626426.1| chr1 43476363 43477005 +
5 domain predictions
1 GO term
Lj1g3v4252330.1
n.a. PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Glycine max] gi|356500501|ref|XP_003519070.1| chr1 50232453 50234322 -
5 domain predictions
1 GO term
Lj1g3v4288970.1
n.a. PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform X1 [Cicer arietinum] gi|502108965|ref|XP_004493535.1| chr1 50499754 50501927 +
5 domain predictions
1 GO term
Lj2g3v1020060.1
n.a. transcription factor C2H2 [Lotus japonicus] gi|193237571|dbj|BAG50062.1| chr2 15928887 15931746 +
5 domain predictions
1 GO term
Lj3g3v0478150.1
n.a. PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cicer arietinum] gi|502157980|ref|XP_004510979.1| chr3 5527355 5529415 -
5 domain predictions
1 GO term
Lj5g3v0889460.1
n.a. n.a. chr5 13115901 13117287 +
2 domain predictions
1 GO term
Lj5g3v0889470.1
n.a. PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Glycine max] gi|356500501|ref|XP_003519070.1| chr5 13116469 13118574 -
2 domain predictions
1 GO term
Lj5g3v0889480.1
n.a. PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Cicer arietinum] gi|502166025|ref|XP_004513765.1| chr5 13116475 13118574 -
5 domain predictions
1 GO term
LotjaGi1g1v0620300.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G12440.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q7Y1W9|SAP9_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 9; TrEMBL-Plants: tr|A0A072VPZ2|A0A072VPZ2_MEDTR Zinc finger A20 and AN1 domain stress-associated protein; Found in the gene: LotjaGi1g1v0620300 LjG1.1_chr1 116766582 116767307 +
4 domain predictions
1 GO term
LotjaGi1g1v0677000.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G36320.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4; TrEMBL-Plants: tr|I1JQ03|I1JQ03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0677000 LjG1.1_chr1 124377340 124378897 -
4 domain predictions
1 GO term
LotjaGi1g1v0719400.1
n.a. zinc finger (AN1-like) family protein; TAIR: AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein; Swiss-Prot: sp|Q0D5B9|SAP16_ORYSJ Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16; TrEMBL-Plants: tr|C6TE01|C6TE01_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0719400 LjG1.1_chr1 128970878 128974107 -
4 domain predictions
1 GO term
LotjaGi1g1v0719400.2
n.a. zinc finger (AN1-like) family protein; TAIR: AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein; Swiss-Prot: sp|Q0D5B9|SAP16_ORYSJ Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16; TrEMBL-Plants: tr|C6TE01|C6TE01_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0719400 LjG1.1_chr1 128971552 128973239 -
3 domain predictions
1 GO term
LotjaGi1g1v0722400.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|I3SUN2|I3SUN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0722400 LjG1.1_chr1 129370924 129373950 +
4 domain predictions
1 GO term
LotjaGi1g1v0722400.2
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|I3SUN2|I3SUN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0722400 LjG1.1_chr1 129372497 129373015 +
4 domain predictions
1 GO term
LotjaGi2g1v0251400.1
n.a. Zinc finger AN1 domain stress-associated protein; TAIR: AT3G28210.1 zinc finger (AN1-like) family protein; Swiss-Prot: sp|Q67YE6|SAP12_ARATH Zinc finger AN1 domain-containing stress-associated protein 12; TrEMBL-Plants: tr|B3IX35|B3IX35_LOTJA Transcription factor C2H2; Found in the gene: LotjaGi2g1v0251400 LjG1.1_chr2 71685154 71690991 +
4 domain predictions
1 GO term
LotjaGi3g1v0059700.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT3G12630.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9LHJ8|SAP5_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 5; TrEMBL-Plants: tr|K7M0V2|K7M0V2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0059700 LjG1.1_chr3 6247397 6249251 -
4 domain predictions
1 GO term
LotjaGi3g1v0175800.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G27580.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9ZNU9|SAP3_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 3; TrEMBL-Plants: tr|V7BZK7|V7BZK7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175800 LjG1.1_chr3 24437515 24439950 +
4 domain predictions
1 GO term
LotjaGi3g1v0494500.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|A0A151TVN5|A0A151TVN5_CAJCA Zinc finger A20 and AN1 domain-containing stress-associated protein 8; Found in the gene: LotjaGi3g1v0494500 LjG1.1_chr3 91264456 91270406 +
4 domain predictions
1 GO term
LotjaGi3g1v0494500.2
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|A0A151TVN5|A0A151TVN5_CAJCA Zinc finger A20 and AN1 domain-containing stress-associated protein 8; Found in the gene: LotjaGi3g1v0494500 LjG1.1_chr3 91268812 91269345 +
4 domain predictions
1 GO term
LotjaGi4g1v0212000.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT4G22820.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|O49663|SAP9_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 9; TrEMBL-Plants: tr|A0A0D2QM04|A0A0D2QM04_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0212000 LjG1.1_chr4 49385050 49388809 +
4 domain predictions
1 GO term
LotjaGi5g1v0094300.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G36320.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4; TrEMBL-Plants: tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2; Found in the gene: LotjaGi5g1v0094300 LjG1.1_chr5 16579197 16582252 +
4 domain predictions
1 GO term
LotjaGi5g1v0094300.2
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G36320.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4; TrEMBL-Plants: tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2; Found in the gene: LotjaGi5g1v0094300 LjG1.1_chr5 16580132 16580629 +
4 domain predictions
1 GO term
LotjaGi5g1v0139400.1
n.a. zinc finger (AN1-like) family protein; TAIR: AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein; Swiss-Prot: sp|Q0D5B9|SAP16_ORYSJ Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16; TrEMBL-Plants: tr|I1JG86|I1JG86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0139400 LjG1.1_chr5 33595249 33597564 -
4 domain predictions
1 GO term
LotjaGi5g1v0146800.1
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|V7BIA3|V7BIA3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0146800 LjG1.1_chr5 37352616 37355513 -
4 domain predictions
1 GO term
LotjaGi5g1v0146800.2
n.a. Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|V7BIA3|V7BIA3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0146800 LjG1.1_chr5 37352697 37355513 -
4 domain predictions
1 GO term