Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PS51036

Source: ProSiteProfiles

Description

Zinc finger A20-type profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

Associated Lotus transcripts 15

Transcript Name Description Predicted domains Domain count
Lj0g3v0338579.1
– A20/AN1-like zinc finger family protein [Arabidopsis thaliana] gi|15235819|ref|NP_194013.1|
Domains
14
Lj0g3v0349589.1
– Transcription factor C2H2 [Lotus japonicus] gi|193237563|dbj|BAG50058.1|
Domains
7
Lj0g3v0351159.1
– PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform X1 [Cicer arietinum] gi|502108965|ref|XP_004493535.1|
Domains
7
Lj1g3v4288970.1
– PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform X1 [Cicer arietinum] gi|502108965|ref|XP_004493535.1|
Domains
13
LotjaGi1g1v0677000.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G36320.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4; TrEMBL-Plants: tr|I1JQ03|I1JQ03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0677000
Domains
14
LotjaGi1g1v0722400.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|I3SUN2|I3SUN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0722400
Domains
14
LotjaGi1g1v0722400.2
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|I3SUN2|I3SUN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0722400
Domains
14
LotjaGi3g1v0175800.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G27580.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9ZNU9|SAP3_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 3; TrEMBL-Plants: tr|V7BZK7|V7BZK7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175800
Domains
14
LotjaGi3g1v0494500.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|A0A151TVN5|A0A151TVN5_CAJCA Zinc finger A20 and AN1 domain-containing stress-associated protein 8; Found in the gene: LotjaGi3g1v0494500
Domains
15
LotjaGi3g1v0494500.2
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|A0A151TVN5|A0A151TVN5_CAJCA Zinc finger A20 and AN1 domain-containing stress-associated protein 8; Found in the gene: LotjaGi3g1v0494500
Domains
15
LotjaGi4g1v0212000.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT4G22820.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|O49663|SAP9_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 9; TrEMBL-Plants: tr|A0A0D2QM04|A0A0D2QM04_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0212000
Domains
15
LotjaGi5g1v0094300.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G36320.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4; TrEMBL-Plants: tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2; Found in the gene: LotjaGi5g1v0094300
Domains
15
LotjaGi5g1v0094300.2
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT2G36320.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|Q9SJM6|SAP4_ARATH Zinc finger A20 and AN1 domain-containing stress-associated protein 4; TrEMBL-Plants: tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2; Found in the gene: LotjaGi5g1v0094300
Domains
15
LotjaGi5g1v0146800.1
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|V7BIA3|V7BIA3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0146800
Domains
14
LotjaGi5g1v0146800.2
– Zinc finger A20 and AN1 domain stress-associated protein; TAIR: AT1G51200.1 A20/AN1-like zinc finger family protein; Swiss-Prot: sp|A2YEZ6|SAP8_ORYSI Zinc finger A20 and AN1 domain-containing stress-associated protein 8; TrEMBL-Plants: tr|V7BIA3|V7BIA3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0146800
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF57716 SUPERFAMILY 1 6.67