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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0495300 |
| Transcript ID | LotjaGi3g1v0495300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9C690|BH122_ARATH Transcription factor bHLH122; TrEMBL-Plants: tr|V7AEH4|V7AEH4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0495300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91339678..91345141) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTGTTTTTTTCTTCCAAAAACTGAGGGCATTATGGTAAAACAGGACCACAAAACACACCAAATCTGAAAGCTGGATT TGTGCCTCTGTTCACTCCCTATTGGCTGCACCTCCACAGCAACTAAATGGGATGCTACTATATTTTATAATAACCCCTTT CTCTTGAACCTTCCCTTCCCTTATTAGAAGCACACACCATCTCCACCACCACCACCACCACCACCACCACTCTCACCACC ACTGCACGCAACCACAAATCCAACCTCATCTAGTGCAGACACACACCAAAGGTATGAGCTTTTTCCTCTGTTCTTGTAGT TTTCCACTTCATAGTTCACATACTTTGTTTATTTTCACATGTTCCTGTCTTTTTCTAGTGAGCTTAGTGATTCACTTTCA CCTAACACACAAACGGGTTTCCGTTAGTTTCAGTGCTGAGTGATTGAAAACTCAACTCATACATCATTTTTTTTGTCTTG TTCTTATACTTTTTCCACTTCCCCTGTTTGTTCTCTGTCTGAAATTTTTTGTGAAACTTCAGTAGCAACCCACTTCACAG TTTTAACTGAAATCACCTTGATTCTAGGGTTTCTTTCTTGCTCTTAGATCTCTAGAGTTTCTATGTTTAAGGCTTACATA AAAATTAAATTTTTACAGGAATTGACTGAAAACAGAGGATTTCAAAGGGTTAGGATAATCTGAGGAGAGGGTTTGGAATT TGGAAGATTAATCTGGAAGATAAGAATAAAGATTGAAACTTTGGTTTGTTTTTTTTTGGAAATTCAGCACGCTTGTGAGT AGAAGAGTGGAAGAGGAGGGAGAAAATGGAGTCAGATCTTCAGCACCATGCTCCTCTGTTTCTGGATCATCCACAGCACC AGCAGCAGCAGATGAATTCTGGGTTGTCACGGTACAAATCAGCTCCGAGTTCGTATTTTTCGAATATCATTGACAGGGAT TTCTATGAGGACCTCTTCAAACGCCCCTCGAGCCCTGAAACCGAGCGAATCTTCGCCCGGTTAATGAATAGTCTTGGTGA TAGTGATGGTGATGGTGCTCCTGCTGATGCAGAGGATTCACTTGTTGCTCAGAATCTCCCAAGTGTTCAGCAGCAACAGC AGCCGCTGCAGCTGCCTGCTGTGAAGGAAGAAATTGACCAACAATCTCAAGCTATGCCATCCATGAGTACTCAACCTGTA GTTCTTCAACAGCAGCAGCAGCAACAACAACAACAACAGAACCAGAACCCAAGCAACATCAATAGTTTTCAGAATCTTTA CCCAAGCTCTGGAAGACCACCTTTGCCGAACCAGATGAAGACAGGTCGTGCCAATCTTATCAGACATGGTAGCTCACCTG CTGGATTGTTTGCAAACATTAACATTGAAACTGGTACATCCAATTTCTTTTTCTTTTTTGGTCTCAATGTTGAAAAGCCG CACGTTGATAAAAGTCTTTATAATTAGTAGAGCAATTCTCAGGCTAACCGAAATTCTAAGATGATATTAGTTTATCCTAG ATCCGTTTGTATATGGGTCTCCGGCAGATGTTCATTCATGTCAATTTCATGCTCTAGATGTGCGGTTCTGGGCGTGGGGT GTGGTGAAAGGTCTTACATTGATGATAAATATGACCAAATAAGTCTATCTAAAGGGTAGAGCTCATGTCTAACCTAGTTT TTGGGGCAGAGTTGGGCATAACCCAAATTCTAAGAACTAACTGTATTTATAATTCCCCTTTTTCTTTCCATCAGGAAGAA TTGTAACTTTGTTTTAGTTGTTCTTTTCATCCCTATTTTTCCCCTTTTTCTTTTCCCTCTTCACTCTATCATAATTGTCA CCTTATCTGGTAGCATAGTCCTCAAGTTTGTTATTCTAGATCCATTTTGTAGATGTAGAAACTTGGGGGTGGGAGATGAA GAAGAGCAGAGAAAAAAATAAACAGAATTGTGGTCCTTTGTTATGGGGTGTCTGAGTCTGATAGAAATCCTGCTACTGTT TTACAAAAAGGAGGTTGCTTGAGCTAATCATGGGTACAGTTTTCAATTTCTTACTCCATGAATAGGTTGTCATATAATGA CGCTATGCAAGCTTGATTAACAGGCTATGCTGCTATAAGAGGAATGGGAGCTTTTGGAGCTGGTAGTAACAAGACCGAGG AAGCAGCCTTTTCTCCTTCAGCGCGGCTGCAGAATCCACCAAACTACTCATCAGGGTTACTGTCTCCAAGAGCTGAAATT GGAAGTAAAAGCAACACGCAAAACAATCCAGAAGCTGAAGGTTTTGCTGAGACAAGGGGGAATGAATTCCCAGGTTTTCC ATGGGATGATTCTGCAGTCATGTCTGAGAATTTGAGTGGTCAAAAAAGATTTAGAGATGATGATGTAAAACCATTTTCTG GTTTAAATGCAGCTGAAAGTCAGGTATATTATTATTGAACCCTGCTGATTTCTAATAACTGATGTATATTTTGTCACTGT AATGTTTTGTTACATTGATCTGATTTTGTTTCATTGATCAGAATGAAACAGGAGGCCAGGCTCCTGCACCTTTGGCTCAT CACATGAGTTTGCCGAATACTTCAGCGGAAATGGCAGCCATTGAGAAGTTTTTGAAGTTCTCAGATTCTGTTCCATGCAA AATTCGTGCTAAGCGGGGATGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTATGAGATTATTAGTTATTCTAGGCCA GATGACTTTTTAGTTTTTACTCACACAGAAATAGTTGATAAATAGCATGTTTGGATCGGTTTTTCTGTCCCCATAATCAA TTATAACATCCAGAAGCTACTCAGAGAAGCTTGATTCGGAATTGATTTTGGTCTTAGAATCAATTCTAGATGAATTTTCA AACATGCACAATATAGTAAAAATCATTGCGACTAGTGCCTTACTAGCTAGTTCATTGATTCTAACATGCACATGGATAAG GTAGGCTTATGTACTAGAAAATGTATAATAAGCTTCAATGAGTGCTCTTTGGTTTGCATCTGAGTGGTACTACCCCATTT TTATCGATCAATTCTTCATGACTTGGATAGCATCAAATTATTATTTTAATTGTTGGATGGAAAGGCATAATTGACAAACC AGTTGGCATAACAATATGATTGGTGTTTTAATGGTTATCTTTGTGTTCAGGTGAGAAGAACTAAAATTAGTGAGCGAATG AGGAAACTTCAAGATCTTGTCCCCAACATGGATAAGGTAAGGTTTTGTTTGACTTGTGTTGCACAATTTCCCACACACGT CACTTGTTATGTCAATTGTGGAGGCCTTAACGCAACAAATGTTGTTTCTCTCCTTTTGCAGCAAACAAATACATCAGACA TGTTGGACTTAGCTGTTGATTACATTAAAGACCTTCAAATGCAAGTTCAGGTGTGTTAACAACCGACACGTCTCAATTCC CTTCAGGATCAAGTTCTTCTGTCCCCAAATGTTGTCTCAATATCACGTCTCACCAATGAAATATCGTCATGTCAATTAAA AAAGAAATGAATGGGGCAATTACAAACTCAAATGGTGTTTTTAATTGACATGTTAACATTTTATTGGTGGGATAAATAAC GTAACACAGTTTGGGGTCAAAAGATAAGATTTCGGTCATTTTCGATGATGTTATTAGTATGTGCCACAATTAGTTATGAT GCACTATTCATTCTGTTGCTTATTTGATTTTCTTTCTGCATATATCTATGTATACTTTTTGCATAGACTCTTTCAGATTG TCGCGCAAAGTGTACGTGTAAACACAAGCAGCAATGATGGAAAAAATGAGAAGAACCTGAGTTATTCTATGTACAGATAT CGTAATAATGATATATTAATAATAGTTTGATCTAGAAACTAGAGCAGCTTTCTTATATAATTATTATTATGTAGCCACTT ATTCCGCGATAGCATATAAAAGTTGACTTGTAAGATCCAATCAAAATTTGATGCCACATGTGCAAAAGCATGGTGTACAA AATTTTGTGATAATGAAGTTTATGTCGTTAATCTAAGGGCCCTCAATTTAGGGGATGGTGAGGATGGGGAGGAGAAGAGA AATTGTACTTTTGCATATATCTTGAATCATGGAGTGTTGGTTAATTATGCAGGAGACGTGAAAAGGGTTGTGTGTATGGG TTTAGATTCATTCAATGACGTGGAAACATGTGGGACAGAAGCCGACATTGTTTTGTGTTGGTTATCTACTTGTGTTATGA GTAGAGTGTGGTTTACTTTTTGCATTCCTTTTTCATTCGTGTATCTTAAAGTGTGTCTAATAAAGCCAATTTGGTGGTGG TTAACTAGTTATTGACGCTTTGGGATTCATGATCTCAAAGTCCTTATGATGGTACTATTAGTGTATGTTTGGTTTGATTC ACAGATGCGATTTCACATATATCTAAGGGTTATTGGAGAAATTAGTATTTGTCACATTAAGTTTTTGTAGTTCAGTGGAA ATTCAAAACAGTCAAGTTTTTGAACAAGCAAATTTTTGCAATTTGTTTGAAAGAGTATGATTGGTTCAAATAATACATGT TCCAGTCTAATATATATATGTGGAATAAAAACTCCTCCTAGAAAAACTAGTCCCACTTTGGCTCGTTGCCATTCCTTTTG CATTGCATCTTAGTATGTTTAGATTTCCATTATACTCAGCATTGATACATATTGAAGCTATCATGTCAAAATTATACTTT TCCGATCCACGTTAAATTTAACGTCGTTTATATTAGCTTCTTTAATAGTAGTGTATTGAAATATGTAAAATTATGTAATG TTTGCTCTAACTTCAAACCAATCATGTTCACAGTACAGTACATTGTGAAGAGAATCATGTCCGGGATATGTGGCCTAAGA TAGTAAATGGGTTTCGGTCTTTGGGAGCTGATCTGCTTTTGATAGAGAAAGGGCATATGCATATGACATAGCTGGGAGGC AGTGGAAGAGTCACTATCTCTAATGGGCCAACTGTGGGTCCAGATCCATTTAAGTGACGACCATGTCACAAATGATGTCA CAATGCAAAGGTTTCCCTAAACGTTAAGTAAATGTGTGGATTTTCCACAGCAAGCAAAGCTCTATATATGGATAATCCCG TTTCGAATTGACACAATCCCGTTCTCTATATCAACTTTTAATATATATCAGGAATGCAAAGTTTTTATTTTTATTTTTCT GAAGAAAAAAAATGTAATATGAAGTTTTTTCACACTTGTAATCAAGTCGGAGACATCACTATCATATCCGAGTCATATTA GTCACGTGGGGTCCATTTCCCCTGTAGAGACCGGTGGTCAAATGACAAAAAAAAATATTGTAAAGATATCATAGAAATTT AATTTCATTAATTGGTGCGACACATTTTGAGAATTTAATTAGCTGATTAGGTAGAAAACTTTGATGAGAAAAATGATGGT GCACCGACGGTGCCGTCAACCAAT
CDS sequence (LotjaGi3g1v0495300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCAGATCTTCAGCACCATGCTCCTCTGTTTCTGGATCATCCACAGCACCAGCAGCAGCAGATGAATTCTGGGTT GTCACGGTACAAATCAGCTCCGAGTTCGTATTTTTCGAATATCATTGACAGGGATTTCTATGAGGACCTCTTCAAACGCC CCTCGAGCCCTGAAACCGAGCGAATCTTCGCCCGGTTAATGAATAGTCTTGGTGATAGTGATGGTGATGGTGCTCCTGCT GATGCAGAGGATTCACTTGTTGCTCAGAATCTCCCAAGTGTTCAGCAGCAACAGCAGCCGCTGCAGCTGCCTGCTGTGAA GGAAGAAATTGACCAACAATCTCAAGCTATGCCATCCATGAGTACTCAACCTGTAGTTCTTCAACAGCAGCAGCAGCAAC AACAACAACAACAGAACCAGAACCCAAGCAACATCAATAGTTTTCAGAATCTTTACCCAAGCTCTGGAAGACCACCTTTG CCGAACCAGATGAAGACAGGTCGTGCCAATCTTATCAGACATGGTAGCTCACCTGCTGGATTGTTTGCAAACATTAACAT TGAAACTGGCTATGCTGCTATAAGAGGAATGGGAGCTTTTGGAGCTGGTAGTAACAAGACCGAGGAAGCAGCCTTTTCTC CTTCAGCGCGGCTGCAGAATCCACCAAACTACTCATCAGGGTTACTGTCTCCAAGAGCTGAAATTGGAAGTAAAAGCAAC ACGCAAAACAATCCAGAAGCTGAAGGTTTTGCTGAGACAAGGGGGAATGAATTCCCAGGTTTTCCATGGGATGATTCTGC AGTCATGTCTGAGAATTTGAGTGGTCAAAAAAGATTTAGAGATGATGATGTAAAACCATTTTCTGGTTTAAATGCAGCTG AAAGTCAGAATGAAACAGGAGGCCAGGCTCCTGCACCTTTGGCTCATCACATGAGTTTGCCGAATACTTCAGCGGAAATG GCAGCCATTGAGAAGTTTTTGAAGTTCTCAGATTCTGTTCCATGCAAAATTCGTGCTAAGCGGGGATGTGCCACTCACCC AAGAAGCATTGCAGAGAGGGTGAGAAGAACTAAAATTAGTGAGCGAATGAGGAAACTTCAAGATCTTGTCCCCAACATGG ATAAGCAAACAAATACATCAGACATGTTGGACTTAGCTGTTGATTACATTAAAGACCTTCAAATGCAAGTTCAGACTCTT TCAGATTGTCGCGCAAAGTGTACGTGTAAACACAAGCAGCAATGA
Protein sequence (LotjaGi3g1v0495300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESDLQHHAPLFLDHPQHQQQQMNSGLSRYKSAPSSYFSNIIDRDFYEDLFKRPSSPETERIFARLMNSLGDSDGDGAPA DAEDSLVAQNLPSVQQQQQPLQLPAVKEEIDQQSQAMPSMSTQPVVLQQQQQQQQQQQNQNPSNINSFQNLYPSSGRPPL PNQMKTGRANLIRHGSSPAGLFANINIETGYAAIRGMGAFGAGSNKTEEAAFSPSARLQNPPNYSSGLLSPRAEIGSKSN TQNNPEAEGFAETRGNEFPGFPWDDSAVMSENLSGQKRFRDDDVKPFSGLNAAESQNETGGQAPAPLAHHMSLPNTSAEM AAIEKFLKFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQMQVQTL SDCRAKCTCKHKQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| MobiDBLite | 15 | 30 | 16 | - | – | |
| PANTHER | 17 | 411 | 395 | 1.0E-142 | – | |
| PANTHER | 17 | 411 | 395 | 1.0E-142 | – | |
| MobiDBLite | 108 | 166 | 59 | - | – | |
| MobiDBLite | 108 | 161 | 54 | - | – | |
| MobiDBLite | 230 | 249 | 20 | - | – | |
| MobiDBLite | 230 | 258 | 29 | - | – | |
| MobiDBLite | 279 | 310 | 32 | - | – | |
| ProSiteProfiles | 343 | 393 | 51 | 14.939 | ||
| Gene3D | 345 | 414 | 70 | 1.1E-12 | ||
| SUPERFAMILY | 346 | 407 | 62 | 2.88E-16 | ||
| CDD | 347 | 398 | 52 | 7.26487E-13 | ||
| SMART | 349 | 399 | 51 | 1.9E-12 | ||
| Pfam | 349 | 394 | 46 | 1.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0495300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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