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LotjaGi3g1v0496300.1

Overview

Field Value
Gene ID LotjaGi3g1v0496300
Transcript ID LotjaGi3g1v0496300.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; TAIR: AT2G39445.1 Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit; Swiss-Prot: sp|O64792|PIGP_ARATH Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; TrEMBL-Plants: tr|A0A0L9VET7|A0A0L9VET7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0496300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:91442897..91444895) extracted from Lotus japonicus Gifu genome v1.2.

ACAAAGGTGAGCTATAAATGGAGCAGAGGATAAGGGCATGTATTTATTCAGAGTAACAATCAACAAGATCGTCGCTTTGG CCGAGTGGTTAAGGCGTGTGCCTGCTAAGTACATGGGGTTTCCCCGCGAGAGTTCGAATCTCTCAGGCGACGTTTTTGCT TTTTTTTTTTTTTTTTTTTATTTTTAATTTCGCTATTTTCTTCATTTATAATTTCGCTCTTTTTTATTTTTTTCAATAAC TATTTCAGGGTTCAGCTTCCCCATCCCCATTTCGTAGCTGAAGATCGATAACCGCCACAACAGACAGCAACAGAGGCTTC CCATTCACAAGGAGCTTGCTTGCTTGGTAACATCCCTTCACTTCAATTTTCTTCTAATGCTCCATTTCAACGTTGTTGTT GTTGTTACTTTTGAGGCGATACAAACCTAGAAAATGGAACAAGATTATAACTGTTTTCCGTTTTCCATTAATATCTGTAC ATGTGGTTAATTTTGATAATCAAAATAAAGTGTTTTGACCGCGGGACGAGGGATTAGTCTCACGGCTGTCGGCTGTGGGA TACTTTGGTCAAGACAAAAAAAAATAAACAGTGTTTACATGATTTGTCTGCTGGTTCAGGTATTTTTCTGGTGATTGTAA TTGAGGGGAAGTCAAGTGACATCATGGAAAGTCCCCACTCTGTCAACAGTCCAAGAAGAACGCTCAGTTTGTCAAGACAG CGGAGGGCAAATTATACATCCTTTCCTGACCCAGTTGACAACAAAACCTCTGGCTTCGGATTGTCCGGTGATCATGGCCC TAAGCCTTCTGAAGTTTATGGTTTTGTAGGATCCATTAGCACTATTGTTGCTTCAGTTATTTTCTTCATATGGGCATATG TTCCAGAATCATGGCTACATTCTATTGGCATCACTTACTATCCTAGCAGATATTGGGCTCTGGCAGTACCAACTTATGTC ATGGTCACCATTGTATTAATGCTTGGATTCTACATTGGTCTTAACTTCATTTCAACTCCTTCTCCTGCATCTATATACAC AGTTTTTGGTGAGTTTGCTACTCAATTCTTTGGTGATAGTGGTGTGGTGAATTTCGATTGCTAGATTACTTCATATGCTT CCTGCACATGTGTTCAGGATCTAGTGCATTGTTTGTTAGTTGAAGTTTTTTGATTACTGATATGGATATATATTTGTTCA GATGAATTCAGTAGGGATCCTCTGAGTCTTGATTGCTCGCTAGAGGGAGAGGAGAAGCCCATCGATCCTATATCTGATAT TGGTATCGACAGAATCAATGATGCTATGTTCAATAGTGCGGCCTAACGATCAAACTTAACTCCAATAGTATGCTGGGAGT TGCTGCCAAACAGCAACGGGTGCTGCTAATAGATTCTCCCACATTACATTGAGAGGTTATAGCTATTAGACAAGAGATTG AGTTGGTCTTGTTAGAGAATGATTGATTCTATTTCCTTCCATCAAAACACTTCAGCTGCTTTGAGGACATCGTCTTCTCG ATTTAAGTAGTATCTAAAGGAGTAGACTGGTATTTTGCACAGTTTGAACCACCATCGGTTCTATATGAGTCTGCTAAGCC GAATCTGCACCAACGACCACCATGCTAACATATCGCACCAACGCACACGGCTGACAGAGCTCATTGTTGACCGCACGAAC CGCCTTCATCCACAGGCAGAGCACACTTGTGAACAACATTGAGGGCATGACTCTTTCTTTTAAACATTTGCAAATTATCT TTCTAAGAAAAAAATAATGTTCAAGAATTAAGTACTTGCATCTTTAACAAAACTGAGGGCCGCATCTTTAACACATAGAA TAGCACCCCCGTTACAATTGAAAAAAATCACACAAAACTTGTAGATATGCAATTGATTTATTTGCAGGACCATGGACTTG TTTTTCAATGGGTCTAGTGTGCAGTGTGGTAGTTAAGTGATTCATTTTTTTAAAAAAATATCGTTGTAACTTTAAACAA 

CDS sequence (LotjaGi3g1v0496300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAAGTCCCCACTCTGTCAACAGTCCAAGAAGAACGCTCAGTTTGTCAAGACAGCGGAGGGCAAATTATACATCCTT TCCTGACCCAGTTGACAACAAAACCTCTGGCTTCGGATTGTCCGGTGATCATGGCCCTAAGCCTTCTGAAGTTTATGGTT TTGTAGGATCCATTAGCACTATTGTTGCTTCAGTTATTTTCTTCATATGGGCATATGTTCCAGAATCATGGCTACATTCT ATTGGCATCACTTACTATCCTAGCAGATATTGGGCTCTGGCAGTACCAACTTATGTCATGGTCACCATTGTATTAATGCT TGGATTCTACATTGGTCTTAACTTCATTTCAACTCCTTCTCCTGCATCTATATACACAGTTTTTGATGAATTCAGTAGGG ATCCTCTGAGTCTTGATTGCTCGCTAGAGGGAGAGGAGAAGCCCATCGATCCTATATCTGATATTGGTATCGACAGAATC AATGATGCTATGTTCAATAGTGCGGCCTAA 

Protein sequence (LotjaGi3g1v0496300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MESPHSVNSPRRTLSLSRQRRANYTSFPDPVDNKTSGFGLSGDHGPKPSEVYGFVGSISTIVASVIFFIWAYVPESWLHS IGITYYPSRYWALAVPTYVMVTIVLMLGFYIGLNFISTPSPASIYTVFDEFSRDPLSLDCSLEGEEKPIDPISDIGIDRI NDAMFNSAA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 50 50 -
PANTHER 1 167 167 1.2E-83
PANTHER 1 167 167 1.2E-83
Pfam 49 165 117 1.3E-32
Phobius 51 73 23 -
TMHMM 51 73 23 -
Phobius 74 92 19 -
Phobius 93 113 21 -
TMHMM 94 116 23 -
Phobius 114 169 56 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0496300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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