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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0496600 |
| Transcript ID | LotjaGi3g1v0496600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072ULK6|A0A072ULK6_MEDTR C2 calcium/lipid-binding and GRAM domain protein; Found in the gene: LotjaGi3g1v0496600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91466372..91470104) extracted from Lotus japonicus Gifu genome v1.2.
CAATGTTAGCTTATAATTAGAGACGGAGGGAGTATTTTTAATTTCCAGTGTAGTTTTCCACAGATCTCATACTCTCACCT CATAATGATAATAAATAAAAGTACCTAACTTCCAAATAAATCACATTACCTATAACATTTTGGTTTCCCATATATAGTGT TGCTTTTTGCATCTTGACTCCTGAGGTAGCAAGAAACCCACAGTCAAATTCAAACCCCCATTTCAAGGTTTATTACTCAT TTTTTATTTTTACATATTTGGTTTGAGTTGTTGGACAAACCCTGTTTCAGTGAGTGCTATGTCATTGTGGTAGTTGAAGC TGGTGAATCAACATTTATTTGCTTTGTTTGAACTTGCTGTTTACTTGTGTTTCTGGTTTTTGTTGATCTCCTTTGTATGT GTTAGATCTCATCTATGGTACTATAATGCATGCTCAAACTCAAAAATCTCTATGTAAAACAGTTTGCACCATAGGGCATA GAACATTTGATTTGTGTTTCTTCTCTCTGCCATTGGTGTAGTATGCAGATAAAATGTTTGTTTCTATGCAGCTGAGAATC AGTGTACAATAGTAACACAGGTTTTGAATATTGTTGCTCTTCAGCTCAGGAGGTGATCTTGCATTTGCACAAGTATTTTT CCTGGCCTGGTTTCCCTGCCCAGTAAGAGCCTTTGATCTTTCTTCCTTTCTTTCTCTGCCATTTTAGTAATATTTACCTT CAGAGTTGCTTAGCGAGTGTTTGCATTAGCATTGGCATAATTGATTTTCGATAGAATTGATTAGGGTAAAAGTGAGTTGA AAGTGAAGTAATTTATGTTTGTTTAAGTTTACGAAAAAAATGATTTCTATTGGGCAATGTTGTTAAATCCAGTCATGAAA TCAATTCTAGATGTCGATTGTCAAACATTTTTATAGCCACCTAAAAGTGATTATGGTCAATGAGAATTGATTTTAACGCT CCAAACGTGGAACCAAACACACACACACACACTTATTCACCTTAAGAAATATATGATCATTGAAGAAAGAATGAGTGATT TGTTCATGATTTGCATGTTTCCTTCATGCAAAGTGATTTACTGTTTGAAAATCCAAATTGATGCAGGTTAGTTGTTTGTT AAATCGTTTAAGAGAAGAAAATGCAGAAGCCACCAAATTCCCATGAGTTTGCCTTGAAGGAGACCTCGCCCAACATTGGG GCTGGGGCAGTCACAGGGGACAAGCTATCATGCACCTATGACCTGGTTGAACAGATGCAGTATCTATATGTTCGTGTCGT CAAAGCCAAGGACTTGCCTGCAAAAGATGTCACGGGTAGTCTTGATCCTTATGTTGAAGTGAAGCTTGGAAACTACAAGG GACTCACCAAGCACTTTGAGAAGAAGTCTAATCCTGAGTGGAATCAAATCTTTGCCTTCTCCAAAGATCGGATTCAAGCT TCAGTTTTGGAGGTGGTTGTGAAGGATAAAGATGTTATTGTAGATGACTTTGTTGGGAGGGTGTGGTTTGATATGAATGA GATCCCGAAACGTGTTCCCCCAGATAGTCCTTTGGCTTCACAGTGGTATAGGCTTGAAGATCGCAAGGGCCAAAAGGTTA AAGGAGAGCTAATGCTGGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCATTCTGATGCAGCA TTGGTTGGCCCTGAAGCAGTTGCTAACATAAGATCAAAAGTTTACCTCTCCCCAAAGCTTTGGTATCTTCGAGTCAATGT AATTGAAGCTCAGGACTTGGTACCGGGTGATAAAACCCGATATCCTGAAGTTTTTGCGAAGGTTCATTTAGGGAATCAGG TTCTAAGAACTAGAACATCTCAAAGCAAGACCATAAACCCAATTTGGAATGAGGACTTGATGTTTGTTGCAGCTGAGCCG TTTGAGGAGCCTTTAGTTCTGACTGTGGAAGACAGGGTTGGACAAAACAAAGATGAAATCCTCGGAAGGTGCATGATTCC ATTACAGATGCTGCAAAGGAGGTTAGACCACAAGCCTGTGAACAGCAGGTGGTTTAATCTTGAGAAGCATTTGGTTGTTG AAGGGGAAAAGAAGGACATAAAATTTGCAAGCAGGATACACTTGAGGGCATGCTTGGATGGTGGATACCATGTGTTAGAT GAATCAACTCATCACAGTAGTGATCTTAGACCAACCGCGAAGCAGCTATGGAAGCCAAGCATTGGGATTCTGGAAGTGGG AATTATAAGTGCTCATGGGTTGGTGCCGATGAAGACAAGAGATGGTAGAGGAACCACTGATGCTTATTGCGTAGCAAAGT ATGGACAGAAATGGATCCGCACTAGAACAATCGTAGATAGCTTTAGTCCAAAGTGGAATGAGCAGTACACATGGGAAGTG TTTGACCCAGCCACTGTTATCACATTTGGTGTCTTTGATAATGCTCATATACAAGGAGGAGATGGATCCAAAGATTCTAG GATCGGGAAGGTGAGAATTAGGCTCTCTACTCTGGAAAGTGGTAGGATTTACACACATTCATATCCTCTTATAGTGCTGC ATACATCAGGTGTGAAGAAAACAGGGGAAGTGCAATTGGCTGTCAGGTTTACATGCGTATCTTTCATCAACATGTTGTGT ATGTATTCACAGCCATTGTTGCCAAAGATGCACTACATCCATCCTCTGTCTGTGATGCAGTTAGACAGTTTAAGGCATCA CGGCACACAGATTGTATCAATGAGGTTGAGCCGGGCTGAGCCGCCGCTGAGGAAAGAGGTTGTGGAATACATGCTTGATG TGGATTCACACATGTGGAGCATGAGAAGAAGCAAAGCTAATTTCTTCAGAATAATGAAAGTTTTAAGCAGTTTGATAGCA TTTGGGAGGTGGTTTGATCAGATTTGCAATTGGAAAAACCCCATCACATCGATACTAATTCACATCCTTTTCATAATATT GGTTCTTTACCCTGAGCTGATACTCCCCACAATTTTCTTGTACCTGTTCTTGATTGGGATTTGGAACTTCAGGTGGAGGC CAAGGCACCCTCCCCACATGGACACTAGGCTCTCTCATGCTGATGCTGCTTATCCTGATGAGTTAGATGAAGAGTTTGAT TCATTCCCGACTTCGCGGCCAGCGGATATTGTTCGGATGAGATATGACCGTTTGAGAAGCATTGGCGGGAGGGTGCAGTC TGTTGTAGGTGACTTGGCTACTCAAGGAGAAAGGTTCCAGAGTTTGATAAGTTGGAGAGATCCAAGAGCTACCACTCTCT TTGTGACATTCTGTTTAATTGCTGCTATAGTTCTTTATGTTACTCCCTTTCAGGTTGTGTGTCTTCTCTTTGGCTTCTAC GTGCTGAGGCACCCGAGATTCCGCCAGAAACTTCCATCAGTGCCGCTCAACTTCTTTAGGAGGCTACCTGCTAGATCAGA TAGCATGTTGTGATCATGGATTCTGTTCAACTTGCTACTTTCTCATCCAGATTGTTTAGATAGTATGTAAATTGTCAAAA CAGTGGGAATATTCATGTTGTTGCAGTTATGTTAATTTGAGTTCTGTCATCCAGATTGAATCTTACAGATTTTTCTTTAC AAGAAAAATAGGTTCGCTTTTGCTTATCTAGGTGCATAGATTATGCAATAACATGCCAGAAAAATGCTCTGTCTGACAAA CTCCATGCCAAGTGCCAACTATCTATTTTCTATGTCTAAAATTATTATTTTCA
CDS sequence (LotjaGi3g1v0496600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAAGCCACCAAATTCCCATGAGTTTGCCTTGAAGGAGACCTCGCCCAACATTGGGGCTGGGGCAGTCACAGGGGA CAAGCTATCATGCACCTATGACCTGGTTGAACAGATGCAGTATCTATATGTTCGTGTCGTCAAAGCCAAGGACTTGCCTG CAAAAGATGTCACGGGTAGTCTTGATCCTTATGTTGAAGTGAAGCTTGGAAACTACAAGGGACTCACCAAGCACTTTGAG AAGAAGTCTAATCCTGAGTGGAATCAAATCTTTGCCTTCTCCAAAGATCGGATTCAAGCTTCAGTTTTGGAGGTGGTTGT GAAGGATAAAGATGTTATTGTAGATGACTTTGTTGGGAGGGTGTGGTTTGATATGAATGAGATCCCGAAACGTGTTCCCC CAGATAGTCCTTTGGCTTCACAGTGGTATAGGCTTGAAGATCGCAAGGGCCAAAAGGTTAAAGGAGAGCTAATGCTGGCA GTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCATTCTGATGCAGCATTGGTTGGCCCTGAAGCAGT TGCTAACATAAGATCAAAAGTTTACCTCTCCCCAAAGCTTTGGTATCTTCGAGTCAATGTAATTGAAGCTCAGGACTTGG TACCGGGTGATAAAACCCGATATCCTGAAGTTTTTGCGAAGGTTCATTTAGGGAATCAGGTTCTAAGAACTAGAACATCT CAAAGCAAGACCATAAACCCAATTTGGAATGAGGACTTGATGTTTGTTGCAGCTGAGCCGTTTGAGGAGCCTTTAGTTCT GACTGTGGAAGACAGGGTTGGACAAAACAAAGATGAAATCCTCGGAAGGTGCATGATTCCATTACAGATGCTGCAAAGGA GGTTAGACCACAAGCCTGTGAACAGCAGGTGGTTTAATCTTGAGAAGCATTTGGTTGTTGAAGGGGAAAAGAAGGACATA AAATTTGCAAGCAGGATACACTTGAGGGCATGCTTGGATGGTGGATACCATGTGTTAGATGAATCAACTCATCACAGTAG TGATCTTAGACCAACCGCGAAGCAGCTATGGAAGCCAAGCATTGGGATTCTGGAAGTGGGAATTATAAGTGCTCATGGGT TGGTGCCGATGAAGACAAGAGATGGTAGAGGAACCACTGATGCTTATTGCGTAGCAAAGTATGGACAGAAATGGATCCGC ACTAGAACAATCGTAGATAGCTTTAGTCCAAAGTGGAATGAGCAGTACACATGGGAAGTGTTTGACCCAGCCACTGTTAT CACATTTGGTGTCTTTGATAATGCTCATATACAAGGAGGAGATGGATCCAAAGATTCTAGGATCGGGAAGGTGAGAATTA GGCTCTCTACTCTGGAAAGTGGTAGGATTTACACACATTCATATCCTCTTATAGTGCTGCATACATCAGGTGTGAAGAAA ACAGGGGAAGTGCAATTGGCTGTCAGGTTTACATGCGTATCTTTCATCAACATGTTGTGTATGTATTCACAGCCATTGTT GCCAAAGATGCACTACATCCATCCTCTGTCTGTGATGCAGTTAGACAGTTTAAGGCATCACGGCACACAGATTGTATCAA TGAGGTTGAGCCGGGCTGAGCCGCCGCTGAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACACATGTGGAGC ATGAGAAGAAGCAAAGCTAATTTCTTCAGAATAATGAAAGTTTTAAGCAGTTTGATAGCATTTGGGAGGTGGTTTGATCA GATTTGCAATTGGAAAAACCCCATCACATCGATACTAATTCACATCCTTTTCATAATATTGGTTCTTTACCCTGAGCTGA TACTCCCCACAATTTTCTTGTACCTGTTCTTGATTGGGATTTGGAACTTCAGGTGGAGGCCAAGGCACCCTCCCCACATG GACACTAGGCTCTCTCATGCTGATGCTGCTTATCCTGATGAGTTAGATGAAGAGTTTGATTCATTCCCGACTTCGCGGCC AGCGGATATTGTTCGGATGAGATATGACCGTTTGAGAAGCATTGGCGGGAGGGTGCAGTCTGTTGTAGGTGACTTGGCTA CTCAAGGAGAAAGGTTCCAGAGTTTGATAAGTTGGAGAGATCCAAGAGCTACCACTCTCTTTGTGACATTCTGTTTAATT GCTGCTATAGTTCTTTATGTTACTCCCTTTCAGGTTGTGTGTCTTCTCTTTGGCTTCTACGTGCTGAGGCACCCGAGATT CCGCCAGAAACTTCCATCAGTGCCGCTCAACTTCTTTAGGAGGCTACCTGCTAGATCAGATAGCATGTTGTGA
Protein sequence (LotjaGi3g1v0496600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKPPNSHEFALKETSPNIGAGAVTGDKLSCTYDLVEQMQYLYVRVVKAKDLPAKDVTGSLDPYVEVKLGNYKGLTKHFE KKSNPEWNQIFAFSKDRIQASVLEVVVKDKDVIVDDFVGRVWFDMNEIPKRVPPDSPLASQWYRLEDRKGQKVKGELMLA VWMGTQADEAFPDSWHSDAALVGPEAVANIRSKVYLSPKLWYLRVNVIEAQDLVPGDKTRYPEVFAKVHLGNQVLRTRTS QSKTINPIWNEDLMFVAAEPFEEPLVLTVEDRVGQNKDEILGRCMIPLQMLQRRLDHKPVNSRWFNLEKHLVVEGEKKDI KFASRIHLRACLDGGYHVLDESTHHSSDLRPTAKQLWKPSIGILEVGIISAHGLVPMKTRDGRGTTDAYCVAKYGQKWIR TRTIVDSFSPKWNEQYTWEVFDPATVITFGVFDNAHIQGGDGSKDSRIGKVRIRLSTLESGRIYTHSYPLIVLHTSGVKK TGEVQLAVRFTCVSFINMLCMYSQPLLPKMHYIHPLSVMQLDSLRHHGTQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWS MRRSKANFFRIMKVLSSLIAFGRWFDQICNWKNPITSILIHILFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHM DTRLSHADAAYPDELDEEFDSFPTSRPADIVRMRYDRLRSIGGRVQSVVGDLATQGERFQSLISWRDPRATTLFVTFCLI AAIVLYVTPFQVVCLLFGFYVLRHPRFRQKLPSVPLNFFRRLPARSDSML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 567 | 567 | - | – | |
| PANTHER | 1 | 770 | 770 | 0.0 | – | |
| PANTHER | 1 | 770 | 770 | 0.0 | – | |
| Gene3D | 35 | 177 | 143 | 3.2E-29 | ||
| Pfam | 41 | 143 | 103 | 1.4E-21 | ||
| SUPERFAMILY | 41 | 179 | 139 | 7.69E-35 | – | |
| SMART | 41 | 137 | 97 | 3.9E-18 | ||
| CDD | 41 | 165 | 125 | 7.02653E-62 | – | |
| ProSiteProfiles | 42 | 122 | 81 | 14.734 | ||
| Gene3D | 186 | 330 | 145 | 2.4E-24 | ||
| Pfam | 201 | 307 | 107 | 4.8E-21 | ||
| SUPERFAMILY | 201 | 353 | 153 | 1.42E-31 | – | |
| SMART | 202 | 300 | 99 | 1.3E-12 | ||
| CDD | 202 | 351 | 150 | 9.98246E-89 | – | |
| ProSiteProfiles | 203 | 285 | 83 | 13.594 | ||
| Gene3D | 346 | 493 | 148 | 2.0E-26 | ||
| SUPERFAMILY | 362 | 492 | 131 | 5.55E-28 | – | |
| Pfam | 362 | 470 | 109 | 1.2E-24 | ||
| CDD | 363 | 487 | 125 | 7.57308E-66 | – | |
| SMART | 363 | 467 | 105 | 1.1E-15 | ||
| ProSiteProfiles | 364 | 452 | 89 | 10.486 | ||
| Phobius | 568 | 586 | 19 | - | – | |
| Phobius | 587 | 597 | 11 | - | – | |
| Phobius | 598 | 628 | 31 | - | – | |
| TMHMM | 603 | 625 | 23 | - | – | |
| Pfam | 615 | 770 | 156 | 1.3E-79 | ||
| Phobius | 629 | 713 | 85 | - | – | |
| Phobius | 714 | 742 | 29 | - | – | |
| TMHMM | 719 | 741 | 23 | - | – | |
| Phobius | 743 | 770 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0496600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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