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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0496800 |
| Transcript ID | LotjaGi3g1v0496800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A151TMH0|A0A151TMH0_CAJCA Lipoxygenase; Found in the gene: LotjaGi3g1v0496800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91491837..91496234) extracted from Lotus japonicus Gifu genome v1.2.
TGAACAGTCATTTTTACCCTCAGAAACACCAGAAGGATTGCAGAAGCTGAGAGAACAGGAACTGTTACATTTACGCGGCA ATGGCCAAGGTGAACGCAAAACCTTCGAGCGAATCTACGATTACGATGTCTACAACGACCTCGGAGATCCCGACAGCGAC ATCGAACTCAAACGACCTGTTCTTGGCGGCAACCAACATCCATACCCTCGGCGTTGCAGAACCGGAAGACCTCGTTGCCA CAAAGGTAATCAGTTTCATCATCATCATTCAATTGTAATTCATGTAACCATCATTCTAATTTGTTGCACAATGTTGATTT GTGTGTGACAGATCCGTTATCGGAGAAAAGGAGCAACACGGTGTATGTACCTAGGGATGAATGTTTCGCAGAAGTGAAGC AGCTATCGTTTTCGGCCAAGACATTGTATTCAGGGTTGCATGCTCTGGTGCCGTCACTGAGTACAGCTATAGTTGACAAG AATCTTGGGTTTCCTGTGTTTTCAGCCATTGATGCCCTTTTCAATGAAGGGCTCAGCTTGCCTCCTCAGAAAGCCAGAGG ACTTCTCAGCGGGCTTTTGCCGAGGCTGGTCAAGTTAATCCAAGACACTGAGAATGATGTTCTCCGTTTCGAGACTCCCG CAACAATGGACAGTAAGACAATACTACACATACAATAAGGGTTTTAAATTGTAGTTGCGGTTATGTCGCGAAATTGCAAA TGAATGTGGGTTGAAATGCGGTCGCAATTTATGTTGCGGCTGTAATTGCAATTATAGACCGCAATTTGAAATCCTCACTA TATGTTATCGTTGTGTATGATAGTTTGTGTTTTTTGAGGTTAATTACTAATCAATGAATCTGGGTGCTTGTGATTTCAAT ATGGCAGAGGACAGGTTCTTTTGGTTTAGGGATGAAGAATTTGCAAGGCAAACTGTAGCTGGTCTTAACCCATGTTGCAT CCAATTGGTCACGGTACTAGGCCATGTTACCCCTTTTTTATAAAATTGATCAACAGAAACTTCTAACTTGTTTGTAAATA TACTGAAATCAATTGCAAAGATGGCCAATGATACATTTTTTGGATCAATCATTGATACTTGGAGCAAAAATATATTTGTC ATGTAGGAATGGCCAATGAGAAGCAAACTTGACCCTGAAATTTATGGCCCTCCGGAATCAGCAATTACCACTGAAATAGT TGAGCGAGAAATCAGAGGATTCTTTACGGTGGAAGAGGTATGTATATAGTAGTCAATTATATCATGGTTTGAACTCAATA AATAGTCTCTTATATAAGTGAATGTGGTTTTTTACCTTTGGTTTAATAAGCAATAAATTATATCATGATGTTAACTCAAG AAATAATTTAGTGTTAATTGTTGACGTAAAGTAAATTTTCTGGTTTTTTTATGCAATTTGAGCAATGCAGGCCATAAAAC AGAAGAAGCTGTATGTCCTGGACTACCACGATTTTTTATTGCCATTTGTGGAGCAAGTTAGACAACTTGAAGGCACAACG CTATACGGGTCAAGGACATTGTTCGTCCTAACCCACGATGGCACATTGAGGCCACTGGCTATTGAGCTAACTCGGCCACC AATGGATGGAAAGCCGCAATGGAGGGAAGTGTACACACCTTCTTGGCACTCAACTTCCGTTTGGCTTTGGAGGCTTGCCA AAGCTCATGTCCTTGCACATGACTCTGGTTACCACCAACTTGTTAGTCACTGGTATGAACCAATTAACTGATGATCAATA AACATTAATTGAATTGAACATAAGATGCTGCAAGATGCAGGTAGTTGGGATGAGGATAACCATATCTTTCAATAACAAAA CATTTTATATACAGAAGGTTAGTTAGTATATATAGTTTGCCTTTAAATACCAGGTGACTTCAACTTGAACAAACTTTTAT CCCAATTCATCAGAAGAGTTTCTTTCTCTTTATAGCTTGAAGAATGTGTTAGCAAAATGACACTCATATTACTTCTTTGG TGCATTGTTTTTTGCTTACTGATTATGAATATGTATAATACTTTTCAATTCAAGGTGGAGTTTTGAATAATAAAATGCAA TCATTGTAAAACATTTGAAACATTCATTATATATATCTGGTGTAAAATAATCATTATACTTTCTCTGTCTTTTCCTGTTC TCTAATAATCAATCTAGAATTATTCATCAATCTACATACTGCACCATTGGGCTTTTGAGGAGTTGACACATTAACTGAGT AAAATTTATTTCTCTTTTCTTCAGGCTACGGACTCATTGTGCAACAGAACCTTACATAATTGCCACAAACAGGCAACTGA GTGCAATGCATCCAATCTACAGGCTGCTGCATCCACATTTTAGGTACGGCTTTCTTTTATTTATGCCTCATTCCCACTTT CTCTTTATTCCACTCACTTTCTCTTTCTAACTCTATCTTCAATTCCTATCACTCATCTTATTGTTCATTTCCTTCTATGA GTGTGAGTGTAATTGGGGTGTTAACGGAACTTTTTCATTAGGTACACAATGGAGATCAATGCTCTTGCTCGTGAGGCATT GATAAATGCCAATGGAGTAATAGAGAACAATTTCACTCCAGGGAACCTCTCCATCCTTCTAAGTTCAGTTGCCTATGACC AGCACTGGCAGTTTAACTTGCAAGCTCTCCCTGCTGACCTCATCCACAGGGGATTGGCAGAGGAGGACCCAAATGCTCCT CATGGCTTAAAGCTATCCATAGAAGACTACCCTTATGCCAATGATGGCCTCATTCTCTGGGATGCTATCAAAAGTTGGGT CACTGATTATGTGAACCATTACTACTCAGAGCCAGAAGCGAACACAGGTACATGGAAAATGGGACAGTTCGTCCACGAGA AAAAATTCCTTAATATAATACGGCTTAAACAAGTTTTTAGTTCTCAAATTTGGTTTTGGTTCCTACCATCTAATTTTTGT GGTTTTGGTCCCTACTTTTACATATCAATCTGGTTTCAGTTCCTCCTCCGTTAACTGGTGATGTATGTAATTAGTAGAAG GTCACGTCATCATGGTCACATGTCCAGAGTAATCTTACATGCAATGTTTTACTGGCAAGTCAGCTAAGATAGCTTGCACA GTGCACTTATAATGAATGAAATTCTTATAGATCGAAAAATGATAACCTTTCATATAGTGATTTTTTTAATAAAAAGAGCT AGTAGTTATATCTGATTTGGAAGCAACATATACCAGATGTAATTACTCTGGACATGTGACAATGGCGATGTAGCCCTTAG CTAGCCACATCACCAATTAACAGGATATTGTAAAGCAGTGATTGGAACCAAAGTTATATGCAAAAGTAGGGACCAAAACC ATAAAAATTAAATGACAAACCAAAATAAAACTGACTGTAAAACAAAGGATTAAAAACTTATTTATGTCATATAATAATAT TCATATGTTATATCTGCCCCCTGAAGAAATTTATATTGTCTTATTAATTGTTTCTGGCTCCATTCCTGCTCAGGGCCAAG TCTCATTGAGTCAGACCAAGAACTGCAAGCATGGTGGGAAGAGATCAGAACAGTAGGCCATGGTGACAAAAAGGACGAGC CTTGGTGGCCTGTTCTGAAAACCAAACAAGACCTTATTGAGATTGTGACCACCATTGTGTGGATAACATCAGGGCACCAT GCAGCTGTGAACTTCGGACAGTACTCTTATGCAGGCTATTTCCCCAACAGACCAACTGTTGCAAGAAACAATATGCCAAC AGAGGACCCTTCTGACCCTGAATGGGAACTTTTCTTGGACAAACCAGAGGTGACACTGCTCAAGTGTTTCCCATCTCAGA TTCAAGCCACAACTATAATGGCAGTGTTGGATATTTTGTCAAGCCACTCATCTGATGAGGAGTATCTCGGGCAAACTGTG GAGCCATCATGGGAACAGGATCCAATTATCAAAGCTTCGTTTGAAAAGTTTCAAGGGAAGTTGATGGAGCTTGAAGGGAT CATTGATTTGAGTAATGCAGATAAGAGCCGGAAGAACAGAAATGGTGCTGGGATTGTGCCTTATGAGCTTCTGAAGCCAG TTTCAGAGGCAGGGGTCACAGCAAAGGGAGTTCCATACAGCATCTCTATTTGAACTTGCATTTAGAATGTATGTGGTATC ATCTTGATCTTTGAATGCTCCGTTTTGAACTCCTTGTGACTTGAATAAAGTGTATTACAGAACTGTTTATCAGTTGCTAA ATTGTGAATTTCTAAAAGATGTGGTACAATCCTTTACATGAGCTCTATACACAAGCTCTCATAAATGGTGAAGTTAGTTT ATCTAACCAACATTTCTTCATCAAATGACAGAATCAAGAGATGCGAGAAATGTTGCTACTTTGTAGTATCTAACGACC
CDS sequence (LotjaGi3g1v0496800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAAGGACAGGTTCTTTTGGTTTAGGGATGAAGAATTTGCAAGGCAAACTGTAGCTGGTCTTAACCCATGTTGCAT CCAATTGGTCACGGAATGGCCAATGAGAAGCAAACTTGACCCTGAAATTTATGGCCCTCCGGAATCAGCAATTACCACTG AAATAGTTGAGCGAGAAATCAGAGGATTCTTTACGGTGGAAGAGGCCATAAAACAGAAGAAGCTGTATGTCCTGGACTAC CACGATTTTTTATTGCCATTTGTGGAGCAAGTTAGACAACTTGAAGGCACAACGCTATACGGGTCAAGGACATTGTTCGT CCTAACCCACGATGGCACATTGAGGCCACTGGCTATTGAGCTAACTCGGCCACCAATGGATGGAAAGCCGCAATGGAGGG AAGTGTACACACCTTCTTGGCACTCAACTTCCGTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTCCTTGCACATGACTCT GGTTACCACCAACTTGTTAGTCACTGGCTACGGACTCATTGTGCAACAGAACCTTACATAATTGCCACAAACAGGCAACT GAGTGCAATGCATCCAATCTACAGGCTGCTGCATCCACATTTTAGGTACACAATGGAGATCAATGCTCTTGCTCGTGAGG CATTGATAAATGCCAATGGAGTAATAGAGAACAATTTCACTCCAGGGAACCTCTCCATCCTTCTAAGTTCAGTTGCCTAT GACCAGCACTGGCAGTTTAACTTGCAAGCTCTCCCTGCTGACCTCATCCACAGGGGATTGGCAGAGGAGGACCCAAATGC TCCTCATGGCTTAAAGCTATCCATAGAAGACTACCCTTATGCCAATGATGGCCTCATTCTCTGGGATGCTATCAAAAGTT GGGTCACTGATTATGTGAACCATTACTACTCAGAGCCAGAAGCGAACACAGGGCCAAGTCTCATTGAGTCAGACCAAGAA CTGCAAGCATGGTGGGAAGAGATCAGAACAGTAGGCCATGGTGACAAAAAGGACGAGCCTTGGTGGCCTGTTCTGAAAAC CAAACAAGACCTTATTGAGATTGTGACCACCATTGTGTGGATAACATCAGGGCACCATGCAGCTGTGAACTTCGGACAGT ACTCTTATGCAGGCTATTTCCCCAACAGACCAACTGTTGCAAGAAACAATATGCCAACAGAGGACCCTTCTGACCCTGAA TGGGAACTTTTCTTGGACAAACCAGAGGTGACACTGCTCAAGTGTTTCCCATCTCAGATTCAAGCCACAACTATAATGGC AGTGTTGGATATTTTGTCAAGCCACTCATCTGATGAGGAGTATCTCGGGCAAACTGTGGAGCCATCATGGGAACAGGATC CAATTATCAAAGCTTCGTTTGAAAAGTTTCAAGGGAAGTTGATGGAGCTTGAAGGGATCATTGATTTGAGTAATGCAGAT AAGAGCCGGAAGAACAGAAATGGTGCTGGGATTGTGCCTTATGAGCTTCTGAAGCCAGTTTCAGAGGCAGGGGTCACAGC AAAGGGAGTTCCATACAGCATCTCTATTTGA
Protein sequence (LotjaGi3g1v0496800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKDRFFWFRDEEFARQTVAGLNPCCIQLVTEWPMRSKLDPEIYGPPESAITTEIVEREIRGFFTVEEAIKQKKLYVLDY HDFLLPFVEQVRQLEGTTLYGSRTLFVLTHDGTLRPLAIELTRPPMDGKPQWREVYTPSWHSTSVWLWRLAKAHVLAHDS GYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIYRLLHPHFRYTMEINALAREALINANGVIENNFTPGNLSILLSSVAY DQHWQFNLQALPADLIHRGLAEEDPNAPHGLKLSIEDYPYANDGLILWDAIKSWVTDYVNHYYSEPEANTGPSLIESDQE LQAWWEEIRTVGHGDKKDEPWWPVLKTKQDLIEIVTTIVWITSGHHAAVNFGQYSYAGYFPNRPTVARNNMPTEDPSDPE WELFLDKPEVTLLKCFPSQIQATTIMAVLDILSSHSSDEEYLGQTVEPSWEQDPIIKASFEKFQGKLMELEGIIDLSNAD KSRKNRNGAGIVPYELLKPVSEAGVTAKGVPYSISI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 516 | 516 | 0.0 | – | |
| PANTHER | 1 | 516 | 516 | 0.0 | ||
| ProSiteProfiles | 1 | 516 | 516 | 218.795 | ||
| SUPERFAMILY | 2 | 516 | 515 | 5.23E-206 | ||
| Pfam | 2 | 499 | 498 | 1.9E-248 | ||
| Gene3D | 6 | 140 | 135 | 5.5E-53 | – | |
| PRINTS | 32 | 51 | 20 | 2.3E-23 | ||
| PRINTS | 100 | 124 | 25 | 2.3E-23 | ||
| Gene3D | 142 | 515 | 374 | 9.8E-156 | – | |
| PRINTS | 145 | 162 | 18 | 5.4E-22 | ||
| ProSitePatterns | 163 | 177 | 15 | - | ||
| PRINTS | 163 | 180 | 18 | 5.4E-22 | ||
| PRINTS | 183 | 203 | 21 | 5.4E-22 | ||
| ProSitePatterns | 190 | 200 | 11 | - | ||
| PRINTS | 429 | 443 | 15 | 2.3E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0496800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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