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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0506600 |
| Transcript ID | LotjaGi3g1v0506600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyol transporter; TAIR: AT3G18830.1 polyol/monosaccharide transporter 5; Swiss-Prot: sp|Q8VZ80|PLT5_ARATH Polyol transporter 5; TrEMBL-Plants: tr|Q1XF07|Q1XF07_LOTJA Putative polyol transporter protein 4; Found in the gene: LotjaGi3g1v0506600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92388722..92394223) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCAACCAAGCTTTATCCCATCGCTTTCTACCCAATAATTTGGTAGTCTATATAAGCACGCTGAATGAACCCAACTCT CTGCACCACTTGCCAGCTCTCTTCTACTGGCTTCTTAACTTATCTTACATCACCACAGAAAAAACAGATCCCAGCAATTT AACACACCATTCTCTAATCCTTTCCTCTGAGTGAATATCCCTTCCACGGAGTTTCCACTCAACTAAGTCAACAAACATGA CTGAAGGCAAGGTAGTAACTGAAGCAGAAAATGCAAATCAGAAAAATCTTCAGGATTTTGATCCTCAAAAGAAGCCAAAG AGGAACAAGTACGCTTTTGCTTGTGCTATGCTTGCCTCCATGACTTCCATCTTGCTTGGCTATGGTGAGTACACATACAC ATGATACACTATCTTATTCACATACATATATAGAAATCATGACCATTAATTTTTATGTATATATGTTCAGCTGCAACTTT GTCTTTGAAACTATAGCATGTGCTGAAAATGCAAATCTTATCCAGTTTTCCGGAAAAAGAAAGAAAGCCTTTTTAAAGGG AAAGAGAGAAAACAACATTATTCTTAGAATAAAGTGAATCTGAAAGAACACTATTAATGATTCACATGTATATGAATAAT ATGATGATGAATTGATGATGTTATACAGATATTGGTGTGATGAGTGGAGCCGCCATCTACATAAAAAGAGACCTTAAAGT CAGTGATGTGAAGATTGAGATTCTGCTGGGAATCATCAACCTGTACTCGCTCATAGGCTCAGGCCTCGCCGGCAGGACTT CTGACTGGATAGGCCGCCGCTACACCATCGTTTTCGCCGGCGCAATCTTCTTCGTCGGAGCTTTACTCATGGGGTTCTCT CCGAACTATTGGTTTCTCATGTTCGGGCGGTTCATCGCCGGCATTGGCATCGGCTACGCCCTCATGATTGCCCCTGTCTA TACTGCTGAGGTTTCCCCTGCTTCCTCTCGCGGCTTCCTCACCTCCTTCCCCGAGGTAATTACTTCTTTACTCCTCTTTA TGGATAAATAATTTTCTCCAATATTCGGAATTGTGATAAAGAAGCAACTATATATAATTTGTCACAACTCACAATAATTG CACATCTATCAATTTTTGTAATATTAGAATATCATGTAGTTGCAACAGCTGCGATGAGAAAAAGAAAAAACATTAGGAGC AAATAGTTTTTTATAACATATATTCATTCAATTACTAATTTATTAACAAAAAATTGAAAACAATTAATATTGATTATTGA ACCTTAATATACATATAAAAAAGTAGGAAATATTAATAAGTAAACAATGAAGAGTGTGCAACACTCACCTTAGTACTTTA CTTTTTTTTACAACACTATTTAATTAATGTAAGTTTCATAAAATTGAAATTGAGAACTGCATTTTTTATAAAATTCACTA AATTTCAACCAATGAAAGAGAATATGTTGAAAATAGGAGGCAAGTTTCTTTTTCAATTGTAAATTAGTCATAGTGGTCCT AGAACACCTTTACGTGCAATAATATATGTTTCTCTAGCACAAGTTAATCAAATGGTCATCCATGTGAGATTTCCAATTGG AGACAAACAAAAGAACTATTAAATGAAAGTGATACATTTATGAATATACTTTTTATTACACTTCACTTTAATAATTCCTT AAACAAGTACATATCAAACTATGATTTTGGGAAAAGCTCATTTATGAATATATGAATTTTGGGAAAAGCTCATTTAACAT TTATGATTTTGCAGGTTTTCATAAATGGAGGGATATTACTAGGATACATATCAAACTTTGCATTCTCAAAATTGTCCCTC AAAGTAGGATGGAGAATGATGCTCGGAGTTGGCGCACTCCCATCAGTAATCCTAGGCGTCGGAGTGTTAGCCATGCCGGA GTCCCCACGGTGGTTAGTCATGAGAGGCCGCCTAGGCGACGCTATAAAAGTCCTCAACAAAACCTCAGACTCCCCTGAAG AAGCCCAGCTCCGCTTAGCCGACATTAAACGCGCCGCCGGAATCCCCGAATCCTGCACCGACGACGTCGTTGAAGTCTCC AAGAGAAGCACCGGCGAGGGAGTCTGGAAGGAGCTCTTCCTCTACCCAACCCCGGCAATCCGCCACATCGTAATCGCCGC CCTCGGCATCCACTTCTTCCAACAAGCCTCCGGCATCGACGCCGTCGTGCTATACAGCCCCACCATCTTCGAAAAAGCCG GGATCAAGAGCGACACCGATAAGCTCCTCGCCACCGTCGCCGTCGGGTTTGTGAAAACCTGTTTCATCCTCGTCGCCACC TTCATGCTCGACCGCATCGGGCGGCGGCCGTTGCTCCTCACCAGCGTCGGCGGCATGGTGCTGTCGCTCCTCACACTCGG CACCAGCCTCACGATCATCGACCGTTCAGATACCAAAGTCACGTGGGCCGTTGGATTGAGCATTGCAACGGTTTTGTCCT ACGTGGCCACGTTCTCGATTGGTGCGGGGCCCATCACGTGGGTCTATAGCTCTGAGATTTTCCCGTTGAGGTTGCGAGCG CAGGGTTGTGCTATGGGAGTGGTGGTGAATCGCGTGACGAGTGGGGTCATTTCAATGACCTTTTTGTCCCTGTCGAAAGG GATTACCATTGGTGGAGCTTTCTTCCTTTTTGGAGGGATTGCGATTTGTGGCTGGATTTTCTTTTATACTATGCTTCCTG AAACTAGGGGGAAGACACTTGAAGATATGGAAGGGTCTTTTGGTCAATCCAAGTCCAAAATTAAGGGTAATAAGGGAGTT GGAAATGGGAAAGACAATGACCAAGCAGGCCAAGTTCAGTTAGGGACTAATGTCCAAACTTAGAGGAATTAATTAATGAG TATATTAGGGGTAGTATTACTATATAGTAGCTTTGTGGAACAATGAAAAATGTATACAAAAATGACAAGAGGAGCAAAAG TTAATTGTATGCAGTAACCTTTGTCAATGATAAGAAAAAAAAAAGGTGCTTATAGCTTTTCATTGCTGTTTTTTTTAAAT ATATTTTTAACCCTTGACAATTGTGAAACTAATTTTCTAATGTTCGGAATTTATATTAAATGGATACACCTCTCATTTCA AATGATTTTCGGTATACACCAGACTGCTCATGCTTAATGAGCTCAACTATCTGCTAGTTGAGCTACATTTTATTGGTGTG CTATTTTCTTTTATGGTTATAAAGTTAATGTGTAAATGTTAATTTGAGCTAATTTGTGGAAAGTTTAAAAATAAAAAATT GTTTATGTAAATGCAAATAAGGATATAAATGGTTTTTATCCTAAAAAATTTAAGTGTGAGCATGATATATTGCGTGTCCA AATTAACATGCTGCAAATATATTTGGCTTCATCCCAACGTGGACTATAAATACCCTTATTTTTTGTGGGCAATATAATTG AGTGGGCTCACATACTGGAAAAAGGAGGGAAACACCACTAGATCCAAGGGATAAGTTTTACGTGTGGTCATCACTTAACC TTTCTCTTTTTCTGTATTTTGTATTTGGAAATCTTTGAGGGTCTTAAAAGTATATAAGTGGTCCATTTTACTGTGGAATT GATTGAATGTGATTACTATTGGCTGAGTTAGAATGACCATACATTTTCTCTTGTTCTCCTTGATCATTTTCCCCTAGATT TTTAAGTCAATTATTCATGAATCATGGGGTCAATATTTTAGTTTCATTATCATTCGTGTTTTAAACTAGAGACATGGATG AGGATAAAGCTCAGTTAGAGTGATTTCAGTGGTAAATGGGGGCGTATGAGCATCTAGCACTAATTTGTTTTAATTATATT ATAAGAGGACTATTAATCAAACATATAGGATATAAAGCACTTGAAACTCGTGCGCAACATGACCAACCGTGAATGGAGAT GAAGATAGCAGGTAATCAAAAGACAAAGACAACATAATTAAAACCAAGACATTGAACTCTTGAAGCCAACATCTAAGAGA TTCCCTAATCTTTTTTTTTTTTGTGCTTTGGAATAAACTAAATATATTCCTTAAACTATTACTCAATAGACCTTTCTTTA GCTGAACACACAAATCGGCTTCATTTTCTAGTCCTAGGGTTGCCAGTTGTGAGGTTGATTGTCAATTAAATTTTCCACTA ATGGGACAAAGCGATGTACAAGTTGTAGGGTATATTCCTTAATAATTTGGAAACACAAATAAAGCGATATTGGAGGTGGT GGGAAAGCAAGCAAGTGATATTAATTTGTCTTCATAGTGATGCAGGACGCGACAGAGAGTCCATGCATATCTAATTAACT ATCCTATGTATGTATATATGTGTGTAATCAGTGTATGTATGTGGATATTTTAATCTTAGTAGTGATATGTGTGATCGAAT TGTGATATCCTACCACACTCTTTACAGATTTGAAGTCACGTTTAGCTTCAGCTGCAGCGATCTTCAATATTTTTCTTTAT TTTCTGATCTTTCCAAAATTTTCCCTGCAGAAGAAGTTTGTCCTCATCAATCAATCAATCCAATGACTTGTATTTTATTT TAGTTACAGTTTAACATAGTAAAATTGTACTTAATTCATAGTCCAGCCACTAAATTCCTGTCTTTTTGTGGTGGAGATCG TGGAAAGTTCCTAAAAATATCAAAGCTATATAGAGTTATAGACTATTGAGGTTCTATCTAGCTATAACAAACAACTGAAA CAAGTGACTATGTACATGTTAGATAAGTTCTGTATATAATAATATATCTACCGCTTTTTCATGACTTGATAATGTATCAT TGTTTATTTACATAGCCAGAAGGGCCCCACTAATTGTAGGTTCCCTGCACTGCACTGCATACACATGCGTGAACTTGGCT GTCTTATGCTCACTCATCTCTGGAAAAAATCTCTTATGGAGATTCTCAATTGTGTTTGTTACCTCTGCTGTAACGAGGTA AATAGCTGTCTAGCATTAATGCCCCAATAGTCAATAATAGTAATGGGTCTATGACCCTTCACATGAAACATCTACAAACA GTTGTTTTATAAAGCTTTTTTTTTGGTAGGAGAGTGCTCTGCAACTTCAAGCCTGGAATTAATGAAGTATTTTTTGGTGA TTGCCAAGTTTGTTTCTGTGGATGCAAATTCAAAGGTACAGAAGGATTTGGTAAAAAATTCATGTGATTTGTCTATCTTG GGAGAATTGTCAGGCCACATTTATACTGAGCAATTATGATCAAGATATGATAGTAGGATTCATGAGAGTCAATTAAGTGA TGTTGGAATTTTAGTTAGGGATGTTGATGTTCTTTTTCAACTTGTGTTTTTCTTGGACAAACTTGTTTTTTAGTCAACAT TTTTTTTTATGGGCTCAGTTACATCACGAGAATTACCAACCCAATAAATAGTAAGCCCATATGAAGTTATGAAAATGACG CTCGGCTCAATCGTGTAGGTCATTGTGGTTAAAAGTAATTGTTTGAATTTCAAGGTCGAAAA
CDS sequence (LotjaGi3g1v0506600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGAAGGCAAGGTAGTAACTGAAGCAGAAAATGCAAATCAGAAAAATCTTCAGGATTTTGATCCTCAAAAGAAGCC AAAGAGGAACAAGTACGCTTTTGCTTGTGCTATGCTTGCCTCCATGACTTCCATCTTGCTTGGCTATGATATTGGTGTGA TGAGTGGAGCCGCCATCTACATAAAAAGAGACCTTAAAGTCAGTGATGTGAAGATTGAGATTCTGCTGGGAATCATCAAC CTGTACTCGCTCATAGGCTCAGGCCTCGCCGGCAGGACTTCTGACTGGATAGGCCGCCGCTACACCATCGTTTTCGCCGG CGCAATCTTCTTCGTCGGAGCTTTACTCATGGGGTTCTCTCCGAACTATTGGTTTCTCATGTTCGGGCGGTTCATCGCCG GCATTGGCATCGGCTACGCCCTCATGATTGCCCCTGTCTATACTGCTGAGGTTTCCCCTGCTTCCTCTCGCGGCTTCCTC ACCTCCTTCCCCGAGGTTTTCATAAATGGAGGGATATTACTAGGATACATATCAAACTTTGCATTCTCAAAATTGTCCCT CAAAGTAGGATGGAGAATGATGCTCGGAGTTGGCGCACTCCCATCAGTAATCCTAGGCGTCGGAGTGTTAGCCATGCCGG AGTCCCCACGGTGGTTAGTCATGAGAGGCCGCCTAGGCGACGCTATAAAAGTCCTCAACAAAACCTCAGACTCCCCTGAA GAAGCCCAGCTCCGCTTAGCCGACATTAAACGCGCCGCCGGAATCCCCGAATCCTGCACCGACGACGTCGTTGAAGTCTC CAAGAGAAGCACCGGCGAGGGAGTCTGGAAGGAGCTCTTCCTCTACCCAACCCCGGCAATCCGCCACATCGTAATCGCCG CCCTCGGCATCCACTTCTTCCAACAAGCCTCCGGCATCGACGCCGTCGTGCTATACAGCCCCACCATCTTCGAAAAAGCC GGGATCAAGAGCGACACCGATAAGCTCCTCGCCACCGTCGCCGTCGGGTTTGTGAAAACCTGTTTCATCCTCGTCGCCAC CTTCATGCTCGACCGCATCGGGCGGCGGCCGTTGCTCCTCACCAGCGTCGGCGGCATGGTGCTGTCGCTCCTCACACTCG GCACCAGCCTCACGATCATCGACCGTTCAGATACCAAAGTCACGTGGGCCGTTGGATTGAGCATTGCAACGGTTTTGTCC TACGTGGCCACGTTCTCGATTGGTGCGGGGCCCATCACGTGGGTCTATAGCTCTGAGATTTTCCCGTTGAGGTTGCGAGC GCAGGGTTGTGCTATGGGAGTGGTGGTGAATCGCGTGACGAGTGGGGTCATTTCAATGACCTTTTTGTCCCTGTCGAAAG GGATTACCATTGGTGGAGCTTTCTTCCTTTTTGGAGGGATTGCGATTTGTGGCTGGATTTTCTTTTATACTATGCTTCCT GAAACTAGGGGGAAGACACTTGAAGATATGGAAGGGTCTTTTGGTCAATCCAAGTCCAAAATTAAGGGTAATAAGGGAGT TGGAAATGGGAAAGACAATGACCAAGCAGGCCAAGTTCAGTTAGGGACTAATGTCCAAACTTAG
Protein sequence (LotjaGi3g1v0506600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEGKVVTEAENANQKNLQDFDPQKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAIYIKRDLKVSDVKIEILLGIIN LYSLIGSGLAGRTSDWIGRRYTIVFAGAIFFVGALLMGFSPNYWFLMFGRFIAGIGIGYALMIAPVYTAEVSPASSRGFL TSFPEVFINGGILLGYISNFAFSKLSLKVGWRMMLGVGALPSVILGVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSPE EAQLRLADIKRAAGIPESCTDDVVEVSKRSTGEGVWKELFLYPTPAIRHIVIAALGIHFFQQASGIDAVVLYSPTIFEKA GIKSDTDKLLATVAVGFVKTCFILVATFMLDRIGRRPLLLTSVGGMVLSLLTLGTSLTIIDRSDTKVTWAVGLSIATVLS YVATFSIGAGPITWVYSSEIFPLRLRAQGCAMGVVVNRVTSGVISMTFLSLSKGITIGGAFFLFGGIAICGWIFFYTMLP ETRGKTLEDMEGSFGQSKSKIKGNKGVGNGKDNDQAGQVQLGTNVQT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 16 | 509 | 494 | 8.6E-266 | – | |
| PANTHER | 16 | 509 | 494 | 8.6E-266 | – | |
| TIGRFAM | 20 | 489 | 470 | 4.3E-102 | ||
| SUPERFAMILY | 22 | 491 | 470 | 3.4E-69 | ||
| Gene3D | 26 | 498 | 473 | 1.3E-125 | – | |
| Phobius | 32 | 60 | 29 | - | – | |
| TMHMM | 32 | 54 | 23 | - | – | |
| ProSiteProfiles | 36 | 483 | 448 | 47.236 | ||
| Pfam | 37 | 492 | 456 | 1.1E-103 | ||
| CDD | 39 | 490 | 452 | 0.0 | – | |
| PRINTS | 44 | 54 | 11 | 3.1E-22 | ||
| Phobius | 61 | 71 | 11 | - | – | |
| Phobius | 72 | 89 | 18 | - | – | |
| TMHMM | 74 | 91 | 18 | - | – | |
| Phobius | 90 | 100 | 11 | - | – | |
| ProSitePatterns | 90 | 107 | 18 | - | ||
| Phobius | 101 | 119 | 19 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 120 | 124 | 5 | - | – | |
| Phobius | 125 | 147 | 23 | - | – | |
| PRINTS | 127 | 146 | 20 | 3.1E-22 | ||
| TMHMM | 129 | 151 | 23 | - | – | |
| ProSitePatterns | 132 | 157 | 26 | - | ||
| Phobius | 148 | 158 | 11 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 159 | 177 | 19 | - | – | |
| Phobius | 178 | 188 | 11 | - | – | |
| Phobius | 189 | 212 | 24 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| Phobius | 213 | 278 | 66 | - | – | |
| Phobius | 279 | 300 | 22 | - | – | |
| Phobius | 301 | 328 | 28 | - | – | |
| PRINTS | 301 | 311 | 11 | 3.1E-22 | ||
| Phobius | 329 | 350 | 22 | - | – | |
| TMHMM | 329 | 348 | 20 | - | – | |
| Phobius | 351 | 356 | 6 | - | – | |
| Phobius | 357 | 380 | 24 | - | – | |
| TMHMM | 358 | 380 | 23 | - | – | |
| Phobius | 381 | 391 | 11 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 392 | 417 | 26 | - | – | |
| PRINTS | 395 | 416 | 22 | 3.1E-22 | ||
| PRINTS | 418 | 430 | 13 | 3.1E-22 | ||
| Phobius | 418 | 428 | 11 | - | – | |
| Phobius | 429 | 449 | 21 | - | – | |
| Phobius | 450 | 454 | 5 | - | – | |
| TMHMM | 454 | 476 | 23 | - | – | |
| Phobius | 455 | 475 | 21 | - | – | |
| Phobius | 476 | 527 | 52 | - | – | |
| MobiDBLite | 494 | 527 | 34 | - | – | |
| MobiDBLite | 511 | 527 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0506600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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