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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0506700 |
| Transcript ID | LotjaGi3g1v0506700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BURP domain protein RD22; TAIR: AT1G49320.1 unknown seed protein like 1; Swiss-Prot: sp|O65009|BNM2A_BRANA BURP domain-containing protein BNM2A; TrEMBL-Plants: tr|I1LQ51|I1LQ51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0506700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92394489..92398323) extracted from Lotus japonicus Gifu genome v1.2.
TTCATATCATGGTAAACTAAAGTCAAGACCTTGTTTTAGCAGGAATTAAACATGTACCGTTTGAATCATGATTTATTTTA TTTTATTTAATAGTTCTACAATACTTATGAAAATACCTTAGCTTACGCCTATAAAAAGGTCAGCTCTCTTCAAGGGAAAC TCATCCTCACTCCTGAGTAGTGAAAGAGGCTTTCTTTCAGCATAGCAGAAAGATGACTCCTCCTGCACCTGCACTTCGGC TTCTTGCTTTAGCCCTTTTCTCATTCATGGTAATTCAATTATGCATGGTTTTAAGCTTGCAATGATATCATATTTATAGG TCAATTTTCATATGTACATGTAGAAATATATCTACCGTTACAGAATTATTTTGTCAAAGTATACTGTTTCAAAATACTTA GCTCGTTTAATCAAGTGATCTAATTCATTATAATACCATAATGACTTGGATGTGATGGATCCCATTTTTATAACCATTCA TTCAGTGATACACAGAACATATTACCGTAGATTTTTTCTTTCTGAGATTCTCTGTTAGCCAGGCTAGTAGGTTGATATTC TCTCTTCGTTTGAAGCATTAGACACTGAAATGTAACACCATAGTTACTTCTTCTAAACTGAGCTTTCTTTCATTTTCAGT ATATTACAAACAAGCTTAAGTGTTAATTGGGGTTTCATTTAATGTGGCAGTACTTTTAATGAACAGAATATTCGTTAGGA TTGCACTTTGAGATAAAAAGTTAACGGACCTTTTTATGGCTTGGGAGAAAAGTTCATTCATGTTACACTCAACTATATCT CTACACACACTTTGCATCTTCATCTAATTTGTGATTTTTTTTGTTATTTTCATGAAACACGCGATAACATAGCACATTCC AAGCACATGCTCAGTAATTATACTCTGCTTTACCATTTAAACATCAGTAGGAAATAATCTACATACCTTTATTGCTCAGT TACATGATATGTGCAAATGACTCTCCCATGCACTTGTCTCTGTTATAATTCAGGATTCTTTTATATGTTGAAAATCCCCT CAGTCAAACTACACATAATAATTTCCATAGCTGGAACACTCATTTTCTTCTCACTGACATTTTGTAGATTGGCCAAGGCA TCAATGCCAGAGATTTGAAGGTAGAACTACAAGATCAGAAACAAGTGGATTCGAATGGAGCCACCTCAGTATCCAGTGAT GTGCCTTACATTGCCGGGTACTTAACCACAACCACCAAACAACATCACCATCCATCACACCATGGAAACACCGATCAACC TTACATTACTGGATACAAAACTACTACTCCTCCTGGTACCCGTGAAGCCAATCAACCCAATTACATTGTTGGCTATAAAT CTGGTAGCCATGTTTCCAATGAACCTTACATAACTGGGTACAAAACTACTCCTGCTGGAACCAGTGAAGCCACCCCAGTA TCCAGTGATGTGCCTTACATTGCCGGGTACTTAACCACAACAAACAAACAACATCACCACCCATCACACCATGGAACCAC CGACCAAGCTTACATTACTGGGTACAAAACTACTACTCCTCCTGGTACCCGTGAAGCCAATCAACCCAATTACATTGTTG GCTATAAATCTGGAAGCCATGTTTCCAATGAACCTTACATAACTGGGTACAAGACTACTCCTCCTGGTACCAGTGAAGCC AATCAACCCAATAGTGCTACATACAGAGCCCATTCTGGACCTGGTACTCATGACCCAAAGGATTCTGGTGAACCTTATAT AACTCAATATGGTGACAAACCCCCCAAAGAATCTACCTCAGCTCAGGATTCAGTTGAACAATATCTAGCTGAATATGGTG ACAAGACCCCAAAAGAATCTACCTCAGACAAGGATTCAGATGAACAATATCTAACTCAATATGGTAACAAGACCCCAAAA GAATCTACCTCAACCCAGGATTCAGGTGAACAATATCTGACTCAATATGGTGATGGGACCCAAAAAACTGACCCAAAGGT GTCTACTCAAGGTCATGAAGAGAAATCCAAAAACGTGGACCATACAGAGGCTTTCAAGACTGGATTTTTTGCTCTGGATG ATCTTTATGCAGGGAATGTGATGACCCTCCAATTTCCTGTCCAAGAGATTTCTCACTTCCTTTCTAGAAAGGAGACAAAC TACATTCCTTTCTCAAGTTCACAACTCCCCAGTGTTCTTCAGCTCTTCTCAATCCCTGAGGATTCTCCCAAGGCTAAATC CATGAGAGGAACACTTGGACAGTGTGAAGGAGAACCCATCACAGGGGAGAGAAAGATCTGTGCTACCTCTCTAGAGTCCA TGCTTGAATTCGTTGACTCAGTCATTGGTTCAAACACTGAGGGTGATCTCCTCACAACCAGCCATCCCTCACCCTCAGGT TCCCCTCTGCAGAAGTACACCATTTTGGAAGTGTCACAAGATATTGATGCTCCTAAATGGGCAGCATGCCACCCCCTCCC TTATTCCTATGCGGTTTACTATTGCCACTATATATCAACAGGGACCAAGGTGTTCAAGGTCTCACTAGGTGGTGAAAATG GAGACAGAGTGGAAGCTCTTGGTGTTTGCCATTTGGACACATCTGATTGGACTCCAAGTCACATTATCTTCAAGCAGCTT GGTATTGAGGCTGGGAAGGCTCCAGTTTGCCACTTCTTCCCTATAAAACATCTCATGTGGGTTGCCAAGCCTTCAAAAGC CACAATGTGAAAAGAAGGGATATGTGTTGGGTATGTGTAATAAAGGTATATCCCAGTAGTCAGCTACAACAACATGCTGA TGACCATGTTCCTTGAGTACTTCCTTTCTCTTTGTATGTCTTGTGTCCTGTTTTATGTATAAATAATAACAATGTGGAAG GCACGATAGGTATTGAAAAGTGGAAATACTTCCATGTTAGTGTTTATGTCTTTGCCTGAAGAGGATTGCACAACACAACA TGAATGGAAACATGGTACTTGCAATCTTAATTTCATAATGTATAAGCAGCTAGCTAATGTTTAACTTATCTTGGGTGCAA TGTTCCCCACTACCTTCTTCCTACCAACTTAACCCAAACTTAACATCATAATACAATTTGAAGTCCTAGAGTAGAGATCC AAGTGAAGCATGTAAATTGGAAACTTAATTTCACACTACAAATCCAAAAGATCTGGGATAAGAATGTAGGGCTATCTGCA GTAACTTACAATCCTGTTTCATAAAAAAGAAAAAAAAATCACTCACCTTTATTTCCAAAAGTAGATGTAAGAAATATTGT TGAAATTCATAGTAAGAAAACATGATATGTTGAACATTTGTAATTTGTATTTAAAATATTTATTTAGCTTTCCTTTGTAA CAAAAATAAATTAAAAATATTTAAAATTCAACGTGGTACTTATATTAAAAGAATTGAAATTCAAAGTGTGATTGGAATCA AAATGGATCAAAAGGCTTCAAAACCAAATGTTTATAAGGCAACTCAGTCATGAAACCCAGAATTCGATCTTCCACATTTG AAATAGCGACAAACCATGGTTCATCCTCTGCGCCCATAAATTATGACACTTCAAATCAAATTAGTGAACAATAAATTAAA TCTAAATGAACTAATTTATTAATAATTAACAACTAACATTTGTTTATATAAAAAAATTGAGACAAGAAAGGTCCTAATCA CACCGGGTCTCTACGCAGTCCATATGAAATTTTGTACATTATCCAAATACCCTAAGCCCAGGCCGAAATACAGCCCAAGA TCAGAAACATAGTAGTCCACTACAATATCCCAGGCCTTAATATGTTCAACGATTAAGATTATGGATCATTAGAAT
CDS sequence (LotjaGi3g1v0506700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCCTCCTGCACCTGCACTTCGGCTTCTTGCTTTAGCCCTTTTCTCATTCATGATTGGCCAAGGCATCAATGCCAG AGATTTGAAGGTAGAACTACAAGATCAGAAACAAGTGGATTCGAATGGAGCCACCTCAGTATCCAGTGATGTGCCTTACA TTGCCGGGTACTTAACCACAACCACCAAACAACATCACCATCCATCACACCATGGAAACACCGATCAACCTTACATTACT GGATACAAAACTACTACTCCTCCTGGTACCCGTGAAGCCAATCAACCCAATTACATTGTTGGCTATAAATCTGGTAGCCA TGTTTCCAATGAACCTTACATAACTGGGTACAAAACTACTCCTGCTGGAACCAGTGAAGCCACCCCAGTATCCAGTGATG TGCCTTACATTGCCGGGTACTTAACCACAACAAACAAACAACATCACCACCCATCACACCATGGAACCACCGACCAAGCT TACATTACTGGGTACAAAACTACTACTCCTCCTGGTACCCGTGAAGCCAATCAACCCAATTACATTGTTGGCTATAAATC TGGAAGCCATGTTTCCAATGAACCTTACATAACTGGGTACAAGACTACTCCTCCTGGTACCAGTGAAGCCAATCAACCCA ATAGTGCTACATACAGAGCCCATTCTGGACCTGGTACTCATGACCCAAAGGATTCTGGTGAACCTTATATAACTCAATAT GGTGACAAACCCCCCAAAGAATCTACCTCAGCTCAGGATTCAGTTGAACAATATCTAGCTGAATATGGTGACAAGACCCC AAAAGAATCTACCTCAGACAAGGATTCAGATGAACAATATCTAACTCAATATGGTAACAAGACCCCAAAAGAATCTACCT CAACCCAGGATTCAGGTGAACAATATCTGACTCAATATGGTGATGGGACCCAAAAAACTGACCCAAAGGTGTCTACTCAA GGTCATGAAGAGAAATCCAAAAACGTGGACCATACAGAGGCTTTCAAGACTGGATTTTTTGCTCTGGATGATCTTTATGC AGGGAATGTGATGACCCTCCAATTTCCTGTCCAAGAGATTTCTCACTTCCTTTCTAGAAAGGAGACAAACTACATTCCTT TCTCAAGTTCACAACTCCCCAGTGTTCTTCAGCTCTTCTCAATCCCTGAGGATTCTCCCAAGGCTAAATCCATGAGAGGA ACACTTGGACAGTGTGAAGGAGAACCCATCACAGGGGAGAGAAAGATCTGTGCTACCTCTCTAGAGTCCATGCTTGAATT CGTTGACTCAGTCATTGGTTCAAACACTGAGGGTGATCTCCTCACAACCAGCCATCCCTCACCCTCAGGTTCCCCTCTGC AGAAGTACACCATTTTGGAAGTGTCACAAGATATTGATGCTCCTAAATGGGCAGCATGCCACCCCCTCCCTTATTCCTAT GCGGTTTACTATTGCCACTATATATCAACAGGGACCAAGGTGTTCAAGGTCTCACTAGGTGGTGAAAATGGAGACAGAGT GGAAGCTCTTGGTGTTTGCCATTTGGACACATCTGATTGGACTCCAAGTCACATTATCTTCAAGCAGCTTGGTATTGAGG CTGGGAAGGCTCCAGTTTGCCACTTCTTCCCTATAAAACATCTCATGTGGGTTGCCAAGCCTTCAAAAGCCACAATGTGA
Protein sequence (LotjaGi3g1v0506700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTPPAPALRLLALALFSFMIGQGINARDLKVELQDQKQVDSNGATSVSSDVPYIAGYLTTTTKQHHHPSHHGNTDQPYIT GYKTTTPPGTREANQPNYIVGYKSGSHVSNEPYITGYKTTPAGTSEATPVSSDVPYIAGYLTTTNKQHHHPSHHGTTDQA YITGYKTTTPPGTREANQPNYIVGYKSGSHVSNEPYITGYKTTPPGTSEANQPNSATYRAHSGPGTHDPKDSGEPYITQY GDKPPKESTSAQDSVEQYLAEYGDKTPKESTSDKDSDEQYLTQYGNKTPKESTSTQDSGEQYLTQYGDGTQKTDPKVSTQ GHEEKSKNVDHTEAFKTGFFALDDLYAGNVMTLQFPVQEISHFLSRKETNYIPFSSSQLPSVLQLFSIPEDSPKAKSMRG TLGQCEGEPITGERKICATSLESMLEFVDSVIGSNTEGDLLTTSHPSPSGSPLQKYTILEVSQDIDAPKWAACHPLPYSY AVYYCHYISTGTKVFKVSLGGENGDRVEALGVCHLDTSDWTPSHIIFKQLGIEAGKAPVCHFFPIKHLMWVAKPSKATM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| PANTHER | 6 | 559 | 554 | 3.0E-162 | – | |
| PANTHER | 6 | 559 | 554 | 3.0E-162 | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 559 | 533 | - | – | |
| MobiDBLite | 186 | 254 | 69 | - | – | |
| MobiDBLite | 186 | 221 | 36 | - | – | |
| MobiDBLite | 284 | 327 | 44 | - | – | |
| MobiDBLite | 284 | 316 | 33 | - | – | |
| SMART | 337 | 553 | 217 | 1.6E-60 | ||
| Pfam | 339 | 551 | 213 | 1.3E-68 | ||
| ProSiteProfiles | 339 | 553 | 215 | 75.991 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0506700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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