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LotjaGi3g1v0513400.1

Overview

Field Value
Gene ID LotjaGi3g1v0513400
Transcript ID LotjaGi3g1v0513400.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Glycerol kinase; TAIR: AT2G21370.1 xylulose kinase-1; Swiss-Prot: sp|P27155|XYLB_STAXY Xylulose kinase; TrEMBL-Plants: tr|K7LP67|K7LP67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0513400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:93006849..93012670) extracted from Lotus japonicus Gifu genome v1.2.

ATACTCATGATCCAAAATGGGCCTCATAATTCCTTTTCTTTCTGTGTCGTGACTCGTGACTTTGCCACGTTTGGTAGTTC CTCAAAGTTCCTTATCCATGGGCAGAAAAAGCAGTGAACCTGCGACGCTGCAATATGATAGGCTCTATTTCAGTAACCCA CTCTGCAACTGCTAGTGCTAGCAACATTTTTGTATCATGGAAATCACTCAAAAAATGTGGTAATATAAGCTTTCAGTATG TGCAAATGCTCCTTTTATGTTACTTTCCTTAGATTCTTGGACATCAATTGAATGTTACTTTGAATTATTGTCAGGAAATG GGCTATGCAATAATAATGTGAGAAAATCAAGGGCAACAGTATCAATGTCTCTCAGAAACAGAAATGACGGAGTAAGTGAA AGACTCTATCTTGGGTTGGACTTTGGCACTTCTGGTGCCAGGTTTGCTGTTATTGACAAGGGTGGTGCAATTCAGGCTGA GGCTAAGAGAGAGTATCCACTGTACCAGGTATAAATTCAATTACCCTTTTCCTTATAAATTCTTAGCATAGGTTTTTGGT TGCAATGTTGGAATAGGATGATATATTATGTGTTATAAACTTAGATATCAATATGGTTTTGGGCTTGGCGTTTGAAGTAA TTGTTTTGTTCAGTTCAGTGTTAATATTAGATTCATACCACAACAATTTATAAGTGTTACCATAGAACAAGGTGGATCAC ATTAATAGAACCAGGTGCAGGTGGATCGCACAGAATTCTAGTTAGCCATAGAACAAGGTGGATCACAAGGTCTTTTATAT TCACATATTTCATTATGAGATGATTGATGCTTTTATAGCATCAACAACACAATCAGATACAATTTAATAATTAGTGGAGA AGAATGGATTATCTACTATCAAAATCAATTTTCAAATGTTTGGGTGTTTCCTTTTCATAATTGTTGATTATAACTCCAAA ATCAATTAAATGCTATTTATGCATCTGCAAAAAGTATTCTGAGGTTTTTGTTTCTATTGTCTAGAAAGAGTGGAGAGTCA ATTGATTGGGTACGCTCGTGGAAGGAGACACTATTTTCAATGCTGGAAGATATCCCTGTTGACCTCCGCAAACACATTGT GTCCATTTCTATTGATGGGACTTCTGCAACTACTATCATTGTTGATAGGTGGATTGATCAGCAATTTTATAATTTTTTTT GTGTGTTAACTGTTAATTAAGATTAACATAAGATATGATTGTAGCTGAATTCTGAAGTAGGGATGAGCATATGTTATTGC AGTAACACAGGAGAACCATTGTGGAGGCCTTTTCTTTACAATGAGGGTTGTCCTGATGCACTACCGGCAGTGAAATCTAT TGCTCCTCCAAACCACACAGTTTGCTCTGCATCATCAACTCTGTGTAAGCTTGTCTCGTGGTGGAATCATGCTGATTCAG ACAGAAAATCTTCTTTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTTCAGATTAT AATAATGCTCTTAAGGCATCATTTGATAATCTCTAACACCTTATGTTTTTCTCCACATCTTGGATGTTTATGTCTATGTT GCAATTCCCAAGTCGGAAAATTTATCCATTGTGTTTTGTGTTTTACAGGTTGGCTATGATCCTGAAGTGGACTCATATCC ATCATGGCTAGTCTCTCAACCATATTCTCATCTTTTGCCTTCAGTTGTTGCACCGGGAACGCCAATTGCTTGTTTAAAGG AGAACATTGGAAACAAACTCGGTATGCTTTCTTTTTGTTAATTGCATTGCAGTTGTGATAACCGATAAGATTCTGTACCT AGGAACCCATTGGGGGTAAACATTCCATCTCAGAGAGCCTTCCAAAGAATCAAATTAAATTAACAAATTTAAATAGCTAA GTTTTAATCCTCAGTTTTTAGTGCCAATGCTTATTAATTTCGGTTTACTACTTCCAATTTGGTTCGTGCAACCTTATCTC AGTATTCTCTTCTCTTTGGATGATTGTTCTATTGAGAATTGAAACATAGTGATTTCCAACTGGACCACCAGTAAATTTGG TGCACAAAAAGTCACAATTTTATTTGTACTTTGCTTTGTTTATTGTTCTAGTGTAATGGCATCAGAATTTCTTTGACTTC CTTGTTAAAATCTTTGCTGGATTGATGCTATGAAGTGGAAAATCATATCTATAATGCATATCCTTTCAGGTTTTCCGAAG GATTGTGTTGTATGCACAGGAACCACTGACAGTATAGCAGCATTTCTTGCAGCTCGTGCTACTCAACCTGGGAAAGCTGT AATTTCTTACTGAACTTACCTTTAATTATTTATTCATGATGGTAAATTTAAGATATTTAGAAAAAAACTTAGAATCACGC GTCTATTATGATTTCGCATTAAGAATGTGATGCTTCTAAAATGGAAAATATGTTGTGCTATTATTTCTATTATGATTTCA CATTAAGTTTTTCTGCTGCACCATCTATTTCAACAGTCCAAGGTCCTGTTCCTTATTTATGCAACCAACCATGTTAGCTT TTTATGTCTCATAAGATCCTTCTTGATTAGGTCACTTCATTGGGTTCAACACTTGCTATTAAACTACTAAGCAACACGAG AATTGAGGACTCTCGGTTTGGGGTGTATAGTCATCGCCTTGATGATAAATGGCTTGTTGGTGGTGCCTCAAACACTGGTG GAGCTGTTCTTAGACAGCTGTTCACGGACGCACAATTGGAGAAACTGAGTGAAGAAATAAATCCCTCACAAACCTCTCCT CTGGACTACTATCCTTTGCCAAAAGCAGGTGAAAGGTTTCCAGTGGCAGATCCAATTTTGGCTCCAAGGTAGTAAATCCT TCCTGCTTTCCATTTGAACACTTAATTTTGGAATTCACTTCTCATTTCAATGTTAGAAATCTTCTTCATTAACTCAATTC TAGTTCTTTTTTTCCTCTTTCAATATCGATCTTCAAATAAATTTAAAATCCAGTCAAATTTGGTAGGTTTTCAAACCTAG GAATTCATTTTGTTTCTCAAATTCTCTGCTCTCTGCCAGTTCATTAAATTTATAAATTATCAATAGCTAGCAATTGAGAT TGGGCACCAAAATATTACCTGTTCAAGAAAATTAACAGGTATATTAGGGTGTTTGGATAAGCATTGAATGTCAGCTAAAG CCCGTTTCATGAGTGCTAATGCAGCAAAAATAGAAGGAAGAAGTTGTTCCATTGGTCTAAAAGTTATTCTATGTTGATTT TAACTTTTTAGCAAACATGCACTATGTATGTGGCTCCTAAATTGAGGTTTAGAGGATAAAGTAAGTCATATTAACAACTG TTGATTAAAATATCAACGGTTGAGATTGTGATCTTAAATGAGCCTCTTTTTGCAGAGGAGGAACTGAGGAAGTGAGAAGT CAAGTCTCCTGAACAATATACAATTAGATTTAATGATTTTTTAAAAGGAAATGCTTGCAATGCAGCCTCTAATTATTAGG GTTCTATGATATCAATGGGCACAACTCCTAGCTTTTTAGTGGGATTGACATGATACTAAGCAACAAGACTACAAGAGTGT GTTAACTAGTTCATTGTTACTATTCATCTTAAATGATCAGTTCATTTTAGATTTCATGATAAAACTAACTTTGGTGGGCA TATGTTTTGTTACGAAACGAAAAATAACTTTTATCCAATTGCTTTACTTCCTTTAGATTGTCTGCATTAGAATGCTGCAA AATGTCAATAGCCTCCTCTCCGACATGTATCCAAACTCGTACACTTTATATCATTTTTGCATAACTGATGGAATTTAATT TTTTGACAGGCTTCTTCCACGTCCAGAAAATGATGTTGAGTACTTGCATGGGATTTTGGAATCCATTGCGCGTATAGAGG TAAAAACCTTTGGACTGTTTGTGTTTCATAATTTTTTATCTCACCCTTTAGCTGGGAAACAAGTAGGAATTCACTCATTC ATCTGTATATCAGAGTCTAATGGGAAGAAACTCTTGAATGGAATTTTAGGCAAAGGGATATGGATTGCTAAATGAGCTAG GTGCAACCCAGGTAGAAGAAGTTTTCACAGCAGGTGGAGGAGCCAAAAATGAGAAATGGATTAAGATACGCGAGAGGGTG CTTGGTTTGCCTGTGAGGCGTGCTAATCAAACAGAAGCTGCCTATGGAGCTGCATTGTTAGCTATAAAGGGTGATCAACT AAATGTTTCTTGAAAAAATGATTTTTTTGGCCCTGATTAGGCTACCACTTGCCAAGGTGACAAACAACAGACTTTATTAT AGGCTCTTAATTAAGTTGATAAGTTTGCAATGCTTAGTTAACTTTGAATCTAATCTTGATTGAAAATTTGAAAGAGAAGA GAAAGGAAAGTTCGATATGGACGATTAACAATGATTAGAACAATAAAGTAGACGAACAAAAGAATTTCATATTAAGCTTA GTATCTATGAGTCACATACTAAATAATGTATGTTTGCCAATAGTTTCAAATTACATTCAATATGTAATGGGTATTACACT TAAAAGAGACCTATGAGTAAAACTTGTCAAATAATAAAATAAGACATGAGTAAATGGAATCTAAACCATGTTATATTTTT GTTGTCCACGCTAAACTGCATTACATGAATAACCACATTTTTTAATAAGCAAATAAAAATGCAATTAAAAGATGGTACAA AGAGTACCCTAAACCATATACAAAGATAACTTGTTAAATATAGTAAATAATGTCTACAACAGTCAATAAAAAAAAGTTAA GATTTTTAAAGTCTACCTCTAGGTTAACACCAAGCTAAACCCTTAAGACTTTCCAACAGAAATGGAATACATATATTCTC ATTTTTGTGGGTTAATCTGAACTAGTCCTTTTATGGCTCGGTCTTTCTTAAATATGTATTTATCGATCTTTTCAATATTT AGTATCAAGTGAAAATCAAACATAAGTTGTCTCAACTCATCCCATGAATACCTCTAGTTCCTAAGGTTGCCTATTTTTAT TGCCCTTTTTTTGGGATAGCTGAGCTGAAATTACTTATTGCTTAAAAATAATTAACATTGCTTCAGCGAGCAACTTGGGC TTAGGGGTTCTTAGAATAAAAAACATGTTTTTCTCAACTACTCATCTACAAAATTACTGTTAAAAGAATGGTGAAGACAA ATTGAAACAGTCCAGAAACGTTGCAAGATAAAATAAAAAACAGATTTAGCCATAAACAGAAATGAATCCATTACAGTGAT ACATCAAAAAAGAAGAAATTAAAAATGTTATGAGCAACCAAAGAAATTTACATTAAGTTGAACCGATCCAATGGCATAGG GAAGAAAGAGGTAAACAAACAATCCCCGTATGGAATAAAAAAAAAGGTAAACAAACAAAAAACATCATCTTCAAAACACA TTAATTCATAACCATTTTTTTTATGGATAATTCATAACCTTCTTTATCCCTTTGTTTTTATACTTTATTTGATTAAAGGA ATACGTAAGGTGCAGAATGTCAAAGTAATGCAGCTTTATTGACGTGATAGAATGACAGGTTTCCTCAGATGTGCTTCGTT CGATCTGGAAAGTGGTGCAGAAAACGCTTTGTGCTGCGCATTTCTTTCCAGTTTTTGTTCATAAACAGTTCATCATTCCC GCTTGATGGACGTGAAGATGGATCTTGCACCGATAATCAACGGTACCTGTTTGATAATAGACTTAGGTTTGTAATAATTC TACAATACTGTTCATGTTATCCAATGTATCTTCACATCAAATGCTCTACTAAACATGTAATC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0513400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATAGGCTCTATTTCAGTAACCCACTCTGCAACTGCTAGTGCTAGCAACATTTTTGTATCATGGAAATCACTCAAAAA ATGTGGAAATGGGCTATGCAATAATAATGTGAGAAAATCAAGGGCAACAGTATCAATGTCTCTCAGAAACAGAAATGACG GAGTAAGTGAAAGACTCTATCTTGGGTTGGACTTTGGCACTTCTGGTGCCAGGTTTGCTGTTATTGACAAGGGTGGTGCA ATTCAGGCTGAGGCTAAGAGAGAGTATCCACTGTACCAGAGTGGAGAGTCAATTGATTGGGTACGCTCGTGGAAGGAGAC ACTATTTTCAATGCTGGAAGATATCCCTGTTGACCTCCGCAAACACATTGTGTCCATTTCTATTGATGGGACTTCTGCAA CTACTATCATTGTTGATAGTAACACAGGAGAACCATTGTGGAGGCCTTTTCTTTACAATGAGGGTTGTCCTGATGCACTA CCGGCAGTGAAATCTATTGCTCCTCCAAACCACACAGTTTGCTCTGCATCATCAACTCTGTGTAAGCTTGTCTCGTGGTG GAATCATGCTGATTCAGACAGAAAATCTTCTTTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAGC TTGGAGTTTCAGATTATAATAATGCTCTTAAGGTTGGCTATGATCCTGAAGTGGACTCATATCCATCATGGCTAGTCTCT CAACCATATTCTCATCTTTTGCCTTCAGTTGTTGCACCGGGAACGCCAATTGCTTGTTTAAAGGAGAACATTGGAAACAA ACTCGGTTTTCCGAAGGATTGTGTTGTATGCACAGGAACCACTGACAGTATAGCAGCATTTCTTGCAGCTCGTGCTACTC AACCTGGGAAAGCTGTCACTTCATTGGGTTCAACACTTGCTATTAAACTACTAAGCAACACGAGAATTGAGGACTCTCGG TTTGGGGTGTATAGTCATCGCCTTGATGATAAATGGCTTGTTGGTGGTGCCTCAAACACTGGTGGAGCTGTTCTTAGACA GCTGTTCACGGACGCACAATTGGAGAAACTGAGTGAAGAAATAAATCCCTCACAAACCTCTCCTCTGGACTACTATCCTT TGCCAAAAGCAGGTGAAAGGTTTCCAGTGGCAGATCCAATTTTGGCTCCAAGGCTTCTTCCACGTCCAGAAAATGATGTT GAGTACTTGCATGGGATTTTGGAATCCATTGCGCGTATAGAGGCAAAGGGATATGGATTGCTAAATGAGCTAGGTGCAAC CCAGGTAGAAGAAGTTTTCACAGCAGGTGGAGGAGCCAAAAATGAGAAATGGATTAAGATACGCGAGAGGGTGCTTGGTT TGCCTGTGAGGCGTGCTAATCAAACAGAAGCTGCCTATGGAGCTGCATTGTTAGCTATAAAGGGTGATCAACTAAATGTT TCTTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0513400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIGSISVTHSATASASNIFVSWKSLKKCGNGLCNNNVRKSRATVSMSLRNRNDGVSERLYLGLDFGTSGARFAVIDKGGA IQAEAKREYPLYQSGESIDWVRSWKETLFSMLEDIPVDLRKHIVSISIDGTSATTIIVDSNTGEPLWRPFLYNEGCPDAL PAVKSIAPPNHTVCSASSTLCKLVSWWNHADSDRKSSLLLHQADWLLWLLHGKLGVSDYNNALKVGYDPEVDSYPSWLVS QPYSHLLPSVVAPGTPIACLKENIGNKLGFPKDCVVCTGTTDSIAAFLAARATQPGKAVTSLGSTLAIKLLSNTRIEDSR FGVYSHRLDDKWLVGGASNTGGAVLRQLFTDAQLEKLSEEINPSQTSPLDYYPLPKAGERFPVADPILAPRLLPRPENDV EYLHGILESIARIEAKGYGLLNELGATQVEEVFTAGGGAKNEKWIKIRERVLGLPVRRANQTEAAYGAALLAIKGDQLNV S
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10196:SF80
46 477 432 3.7E-233 –
PANTHER
PTHR10196
46 477 432 3.7E-233 –
Gene3D
G3DSA:3.30.420.40
56 285 230 8.2E-31 –
PIRSF
PIRSF000538
57 479 423 3.7E-41
IPR000577
Pfam
PF00370
59 288 230 3.0E-13
IPR018484
SUPERFAMILY
SSF53067
59 287 229 5.07E-32
IPR043129
Gene3D
G3DSA:3.30.420.40
286 480 195 1.1E-30 –
SUPERFAMILY
SSF53067
294 474 181 6.48E-20
IPR043129
Pfam
PF02782
327 473 147 2.4E-8
IPR018485

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0513400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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