Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0514500 |
| Transcript ID | LotjaGi3g1v0514500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metacaspase; TAIR: AT1G79310.1 metacaspase 7; Swiss-Prot: sp|Q6XPT5|MCA7_ARATH Metacaspase-7; TrEMBL-Plants: tr|I3T222|I3T222_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0514500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93150018..93158099) extracted from Lotus japonicus Gifu genome v1.2.
TGACTATTTACCATTGGTTAAAAAAAAAGACTATTTACCATGAAAGTGTGATTGGTTATTTATCATGAATGATAAAAAAA ATTCCTTTTAACCAATTTATCCTCTTCTTCACATTTACCGAAGTTAACTTTAACAATTTACAACCACCGCCCCAGCGTCA CCGCCGCCTCAAAGCTTTCCCGATACGGTGGGTGAGGATGATGAAGAACAAGAAGATTGGGCCAATAGAGGAAAATTCAT GGGGAAAGGAGAAGAATGTGCCCGTAGAGGAAACTTTAAGGGAAAATAAAGCTCTGTTGATTGGATTGAAACACCCACAG ATGACTGATATTGATGATGTGAAAGAGAAGATATTGAGGATGAAGAAATTTCTGATGGATCTGCGAGGGTTTTCAGAGAA TAACATCACTCTCTTGATTGAAGATGGAGATCCAAACGAATCACAACCCACTGACTACAACATACGAGTAGAGACATGCT ATTTGGTTGAGCATGCTAAACCAGGTGACATCCTTTTCATCCACCTCATCGCCCATGGCTGCTCTGAAGGCAATATCACT ACTTCTGATAAAGTCCTCCTTCCAGGTATATATGGTATCCAAACAAACACACCTTAATTTATTAGAGAAATTAGAAAGCT TTTGTTATCATTATCTGATCAGTGAATCATCAATTCCATCCTTGATTGTGTCCATTGTAAATTAGTCTACAAACTTGACC ATGCTCACACTTTTAGAGACTTGTTAATAGCGCGCAATAGCACTATAGCGTAGCGCCCTGGGGTTCACCGCTACTCCACT ATTCATCGCTATTTGCCACTATTGTCCGCTATTTGCCGCTATAGCACTCGAAATAGCGTTTTTAGGGTGTGCCGCTACGC TACGCTATCCGCCATTAACAATTCAGGGACGAAAATGAGCGTTCACTCTTATTTAATTGATATTGCTGGCAGGCATTGGT ATATAATTCTTTGTTTTATGTGCTTGCTTGCTTGCAAACAGATAATCATTTCAGGACAATTATATACACTGCCGGCGCTT TAGGTTGTACCCTGACAATTGTCTCCGATTGCCTAATTCAACCTGAAAATTCTGTGTGTTGTACTCCGGGAATACCAGCG GTTAGTCAACAAGACAAGAAAAGAATTTTCACAAGACACCCAAATATTAAATATACCATTCTGGTATATCCGTGTTTTTG CACCACCGGTTTGTCTCCTGTTGATATCCTCAAGGAGGAAACAGCTTGCATAACTCCAACTCTCGAGCCCCCCTCATCCG AGAACAGCTTTCCAAATTCAAGATTAATTCTCTTGAATGCTTTCCAGTATGACCAGAAGAAGCCCAAAGAGGGAGTTGCT CACTTCGCCAACGGGGGACCCTTCAATATGCCAGAATTATTCTTAGCTTCTTCCACAACCACTACTACTCCTCCTAACCA ACACAAATTATATGGGGTTTTTACCACTACCATTCTTGATATAATTGAAGAGACTCAGGGACGTGTTACTAGTGTAGAGC TTGCGCGAGAGGCTCTGGATAAACTTAGGATGCAAGGTATTCATCAAAAGCCTGGACTGCATTCCAATGACCACCACCAT GCTTATGCCTCCTTTTTGTCCGCTGATTAGATAGCAGTATAGCACACTGAGTATATATATTATTTGAATGATGTCAATGT ACTATGTGAAGCGACATATGGTTTTTGGTCAGATGATCTGTTCTTGTTTAGTTATTTCAGGTTTCGTGTGTTCTTATTTA AATTTGCTATTTTTTCCTAGTGCTTTGGGATGTAAGAATTATGCGCGTTCAGTTCTATTAAATGCCTGATACAAAGTCTG AATCCAGTTATTCTCAGCTTCAAAATATTATTATTTTGCTATGATTGTAGTCTGATGACAGCCTTTGGTCTGAATCATAT GTTGTTTTGTACCCGTTTGAATGCAAACCTAAAAGCACTTATTGGAGCTTTTTTAGTGTATTTTTTTGTGGATAAGCTCC AATAAGCTTTAAAAAGCCCCTACCAAAGGGCTCAAGCTAAAGCTTGGTGACAGTTCTGCATTTTGTTTAAGCAGTTAATT GAAATTTAAACCTGAAGTGCTTTCCTTTCAAATTGGTCGTGCAATTATTAGTTTCTTGGATTTGTGGGTTTGCAGTACTA GTAATTCATGGTTCCATGCTTTAAACTTTTTCTTAGCCTAGAGTAAATGATGTGACCCCATAAACCTGAATGTTATTCTA GCTTACACTTTTGACACACAGCATTAAAACTGATTTGCTTTGGTGATTTACTAATAGGATTTGTGTGTATTTTGCATGTT AATGTTTCATGGGATGTACTCATTCTATTTTTTGTGCCATGAATTATTTTTTATCTGTTGTACATCTATTTTTATTTTTA TTTTTTTGTTAAATTGGACGGCAAAAGCCCAAAACAAACTACACTAATCTAGGGAAAGAGATCCCAGCAATATCATCCCC AAGACACACGCTCTAAGAAAAGCAGGAACATTAGAAGAATCAAACAGAAAATCCTGGACAACATGTCCTAGTTTAGCAAG CAGGTCTGCACTCCTATTTCCTCCCTAAAAATGAGGTGGAAGGAAACCTCCCAGCCACCACCAGCCAAGTCCAGAATGTC GTTGACAAGATCAGCACAAGGGTGAAAAGCTCCACTTGAAGTCTACCCACAGACAAAGATCTAGCAAGCCTTAGGCCCTT CAAGATACTCCAAAGTTCAGCTCTAATAGAAGAACTTAACCGGAGGAGAAACCCCAAAGCACTTTCCCCTTGAAATCCCT AATCAAACCACCACAAGCAGCTTTACAACTCTGATTAAGAACTGAGCCTTCAGTTTTGAGTTTCCAAACAACCAGAATAG AGCCATCATGTATACATCAATTTGATTAGTGATAAATGCTGATTTTGATGGACATGTTTACGTTTCAGTCTACTACCACT ATATATTGGGAAATGACATTTTCCGTTTTCATTCCCATATTCTGCTAGTTAAACTTTTCACATAATCAGGTTTGTCTTGT AAAGATGACTTTGCAGGCCAAGTGCTGATTGCAAATGAGATTAAAGATGAAGGTTAAGACTTAGATACAAAAAGTTTGCA AGAAGTGTGAATTTAGTTTAGGAGGGCACATCCTTACAATATGATTGGTTGATGATGTAAAAAAATTTACACTGTTAGTG CATCATCTTACAATATGATTGGTTAATGTTCATGTTGCGCAACGTTGAAACAATTAGATTTGATTATCATCTTGTGTACG TTTTTCAGCTTGGTTGTGGTTAAAAGCAAATAATAGAAACTTCCACCATGCAATTTTTTAGTGGTATTGTGAACCAATTT CATGTTTTGTAACATCATGACAATTGGTAGGTTCTAGAAACTTGCACTCACACTGAAGTGTGAGTTTTGATTGTAATCGG TCGAATACCCCTTTTACTCCCTTCCATAAATTGCTTATAAAAACATTTCATTTCAAAAAAAAAATTGCTTATAAAAAAAA TATTAGCTTATCTTCACCGGTACATGTGCTTGACTATATTGACTTCAAAATAAAGAAGTTTTGAAAAAAAAATTATAATA TTTTTGAAATTGTAAAAATAATAAAAAATGTGAATATTACTAAAATTGACAAATACTTATTTCCAAATGTAACATAAAAA ATTGATAAATAATAAAATAATTTATTTAATAAATAATTTCATATTTAAAAAAAAATGTAATTTTATATAAAAAAGTTACT TTTTTCTTGTTTGACCCTCTACATAAGCAAATAAAAGGAGGGAGATAGGTTTAATTTTGATTTTTGATTTTATTAAACAA CAAATTCTATTATATCTCAGTTCTCACTACTTCATCTCTTCTCACTTTCTTCCCTACACCAAACAAAACATTTTAGTAAT AAACAAATGGCTTGAACATATTTAACTAAGGAAATTGGGCTGAGAAACCGTCTTGAGAAGATAATCGGTGGCCCATCGTC GCCGTCACAAACCTCATACACCCGCGCCGTCAATACTCGCCATTCGCGTTCACCGCCGGCACCACCTGCCTTTTCTCTGT AATGGACGAGGTCCGTAACTTGACTTGTCAAAACTGTTACAACGTCGGAGCACGTGACGGTGACGACGGCTTCTTTTACT GCCTCCGCTGCGGCGAACGCTGCGAGGATGTTATCGACACCGCCGTCGATGACGATGATCTCTTCAATAAAGGAGGAGCC ACCGGCGCCATCTACATGCCCAGTCACCAACGCCAGCGACCTACTGCGATTAAAGCCGAACCCATCTCTCAGTATGACTC CTTCTATGATTCCCAGTCCAATTTCATCAAGAGTCTGGGTTTACAAGATGAAGCTGATATTGTCAAGGTTAAAAAAGAGG AAGATATTGACATGGACCAGTTTCGTGGGGAAACTCCAACGGAACCTGCAGATTTTGCTAAACGGAAGGTTGCAAGCTTT GAAGATTACCACAATGAGATAAGGATGCGGTATGTCATGGGGTTGCAGATGATGATTGAGCTTCAGTGTGAAGCGTTGGT CAAGGAGTTTAAGGTTACTCCTTTGGTTTGTGGCTTGGTTGGCTCAATTTGGTTGAGATTTGTCTCCAAGACTGGTGTAT TTGATGAAGATTGGGCTGAAAAAGTAATCCATGACTCTGAGATGCAGGAAGAAGGTAAGAATTTGAAGTTACCTTGCCTA TGTTTCTACATTCACATATACCCTTATTTGTTCATGGTCTGATTCTGTATTTACTAATTTGATGCATAATGTTGGTTTAG GATTGAGCATGATGTCTGAACTCTTGAATTTTTTTGCTTGTGACATATGTGGACTGAGTCTTATTCATGGAAGGTTCACT AGTAAATGCTTTCTGCTTCTATTGAAGTTTCATGGAACCTGATATTTAACCAAAATATTTTCTCTCTACTAGAAATCCTT TTTCTGATTTTTTACAACTCAATTTGGTATTCATAAAGCCTGGATTTGAGCCCTTAAGTATTTAATTTACTGTATCAATG ATCATATGAGAGGATGAGTTGATAATTTTCTACTAACGTTTCATGTAAACAATGTTTCTAAGATAATTTTCGTCATCACT CAGGAGCTGCGTGCCTTATTTTCATCGAGTATATTTTGTAAGTTTATTTTTTGTTTGGTATCAGGAGAAGCAGAAGATCA TATGCCGCGCTCTAAACATAGAGCAGAACCCCATAATATGTTTGGTCGGCGAGCTGTTATGATATGGTTTAGGACATTAA GGAATAGGATTCCACTTTCTTGTACTGTTGCCATTTCATATCTGGCATGTCATATTGCCAGGGAAGCTGTCCTGCCATCA GACATAATGAAGTGGACATGTGAAGGGAAGCTTCCATATTTTTCTGCTTTTGTTGAAATTGAAAGTCGCATGGGACCCCC ATCAATTGCATGTCCAATCAGTTCAAGCGTTATGTTCAAGCCTCAGCGAGCTGTTCCTGTGCGGAAGCTAGAGTTGTTTG CCTCTTCCATTGCTCAGTTCATAGGCCTTGAGTTACCTCCTGTTAACTTTTATGCAATAGCTTACCGTTATCTTGAAAAG TTGTCTCTTCCTGTGGAGAAGATTCTTCCTTACTCATGCCGTATATATGAATGGTCAATGCCTCCAGATTTGTGGTTATC CTTATCCAAAGATTGTTTTAAGCTACCTACTCATGTTTGTGTTGTATCAATTCTGGTTGTAGCCATAAGGATTTTGTACA ACATAAATGGTCTTGGAGAATGGGAGAAAAGTCTATCTCATATTGATGGTGCCAAAGGCAATGGTGATATGGGTAATCCT TTTGCCTCTCGTGGCGAACATGATTTTGGTAAAGATTCAGCTAAAGATCCAGTAGGACACAAGTTGGATTCTGCTTGGCT TCTCCAGCACCTCCAAACAAGATATATTACAGATTCTTGTGGTAAAGTTATTCTTTACTCTCATTTTTATCTTATTGAAC CTATGTTGCATGAGTTTATGTTCTCTTCTCCTATTTTGGCAACTAAATGACTTTCTAACAACAAGTATTTTTGGACAGAG TATTCAGAGGACTTACCTACCTATCTCAAATACTGTAGGGATGTTGTCTTTGCTGGATCAGAACCATCTTATGGCAATCA CGAGGAAGAAAAGATGATAGAACACCTATGGAACTTTTATCAGAACAAAGAGGTAATTATGACACTTGAATGAGTTATTC CTTTGGCATGTGGCCTATAGAATTATAATATCTTGGATTTACTTCGATCCTTTTTCCTTTTCTGTTGGCATGTGTTAAGA ACTTTGTGCCTGTGGTCTTTTGCCTTCATGACAACTGTTCTAAATTTTAGTTTCTTTCTGCGTGAAACTTGTAGAGTAAA TTGTCTTCATCACTATTTCCTAGATGACATTCAACTTCAAGAAAAATATCAAAAGAATGAAATAGTGTTCCTGCAAAAGT GAGGGGGCTCAAAATGCATAAATTAAGTGCCAGTCATTTATACATCTTTAAATACTGTTATTAAATTTTTATGAATTCAT TAGGTTAAGATTGCTAGAAATGAGAATGTTAAGATTGATGAGTGGCCACAACCCCACATTAGAAAGGATAGGATATGCAA TGATCGTATAAGATGAGATATTGTGGTTGTGCTTATTGTACAGAACCTGAAGGGTTGTATGGACATGTAGAAAGAAGATT TTGGAGGCACCAGTGAGAGGTGGATAACATGGTCTTTAGTCCTGTGAAGAGGGTAGAGGGAAGCCAAAAAGAGCATTATA ACATTGTTATAAATGACCTTATTATCAATAAGATCCCTCAAAATCTGGTTTTTTATCGAGTTCAATGGTGTAGAGTGATC CATATAGCGGATCTCACTCAATGGGATAAAGCTTTTGTTGTTGTATTATTTGATTATATTTACATGTGTTGAACTACAAT ATATCTGCATATGATTCCTATATCTTGATAGGGCTTAATTATGCTTCTCAGCATGATATTTCATTCTTTTGTTAGTACCT TCACTTTATGGGTTTACTGTGTTCTAAAGATGTGTAAATGAAGTCGTGAAGGTGTACTTTCGTATTCTCAACTAGTTGGC GACATAGTTTTAGATACTCACATACTAACTGCAGTATCTGTGGAGCTTATGCTTCTGCTAATGAAGCATACTTTATGAAT GTTCTCTTCCAAATATTCTGCTGATATAGGTTGAAAACTTTTATTTTCCATCATCTCTGATAAGCAGAATTTATCAAATA AAATTAAAATTTGACTCTTGTCTCTTTCTGTTACTTTTTTTCAGACTTCTAAACCATCACAAACGGAAGAGCAATCCAAT GCTTCTTTTTACCGAACAAAGTCGAGGGACAAAGGACGCAATAGAGGCACATCTAAGGAGGAAAATATGACAAAAGAATG TTTTCACGAAACAAATGACTTGTCTGGAAGTATTGGTAATGATCATTCTTCTGAGAGTTTGCCACACAGTAAGGACTCGG ATGAGTATGAACACAGTTCAGGAAAACCATCTGTGAAGGAAGCCATTAGAAAGATGAAATTAGACATGGAGGAAAACAGA TTTTGTTATATACCACCTAGAGTCGAGCGGAAAAGGCTGGATTACCTTCACTACTCAAGAAAGAGGGATGAAGGTGCCCT TACTTATGTTGCTCATGCTGATTATTACATTTTGCTTCGTGCTTTTGCCAGGGTTGCTCAAGTTGACATTCGAATTTTGG ATATTGGTGTGTTGAGCCTTGAGACAAGACTTGCTTGGTTGGAAAAACGGATTGATCATTGCTTTCATTCCAAGCCTCCC AAAAAGAATTGCCAGTTTTGTAGTGTTATGGCCTCTGAAATTGAATCTGGACTCTCAAATTTGAATATTTGAAAATCAAT TCTTTATTCTTAAAGTGTGTTTGGTTTAAGGGTTTTTCCAACACAGTTTTTCATTCCAACTGACTAAAGTTGTTGTTGGA TTGATAACATCCAATCCAATGAATAATGAACCCGCACTTCACCACTTAGAAATAGAAATGAGAAAGAATGTGTGCTTCAT AT
CDS sequence (LotjaGi3g1v0514500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAAAAAAAATTCCTTTTAACCAATTTATCCTCTTCTTCACATTTACCGAAGTTAACTTTAACAATTTACAACCACC GCCCCAGCGTCACCGCCGCCTCAAAGCTTTCCCGATACGGTGGGTGAGGATGATGAAGAACAAGAAGATTGGGCCAATAG AGGAAAATTCATGGGGAAAGGAGAAGAATGTGCCCGTAGAGGAAACTTTAAGGGAAAATAAAGCTCTGTTGATTGGATTG AAACACCCACAGATGACTGATATTGATGATGTGAAAGAGAAGATATTGAGGATGAAGAAATTTCTGATGGATCTGCGAGG GTTTTCAGAGAATAACATCACTCTCTTGATTGAAGATGGAGATCCAAACGAATCACAACCCACTGACTACAACATACGAG TAGAGACATGCTATTTGGTTGAGCATGCTAAACCAGGTGACATCCTTTTCATCCACCTCATCGCCCATGGCTGCTCTGAA GGCAATATCACTACTTCTGATAAAGTCCTCCTTCCAGATAATCATTTCAGGACAATTATATACACTGCCGGCGCTTTAGG TTGTACCCTGACAATTGTCTCCGATTGCCTAATTCAACCTGAAAATTCTGTGTGTTGTACTCCGGGAATACCAGCGGTTA GTCAACAAGACAAGAAAAGAATTTTCACAAGACACCCAAATATTAAATATACCATTCTGGTATATCCGTGTTTTTGCACC ACCGGTTTGTCTCCTGTTGATATCCTCAAGGAGGAAACAGCTTGCATAACTCCAACTCTCGAGCCCCCCTCATCCGAGAA CAGCTTTCCAAATTCAAGATTAATTCTCTTGAATGCTTTCCAGTATGACCAGAAGAAGCCCAAAGAGGGAGTTGCTCACT TCGCCAACGGGGGACCCTTCAATATGCCAGAATTATTCTTAGCTTCTTCCACAACCACTACTACTCCTCCTAACCAACAC AAATTATATGGGGTTTTTACCACTACCATTCTTGATATAATTGAAGAGACTCAGGGACGTGTTACTAGTGTAGAGCTTGC GCGAGAGGCTCTGGATAAACTTAGGATGCAAGGTATTCATCAAAAGCCTGGACTGCATTCCAATGACCACCACCATGCTT ATGCCTCCTTTTTGTCCGCTGATTAG
Protein sequence (LotjaGi3g1v0514500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKKIPFNQFILFFTFTEVNFNNLQPPPQRHRRLKAFPIRWVRMMKNKKIGPIEENSWGKEKNVPVEETLRENKALLIGL KHPQMTDIDDVKEKILRMKKFLMDLRGFSENNITLLIEDGDPNESQPTDYNIRVETCYLVEHAKPGDILFIHLIAHGCSE GNITTSDKVLLPDNHFRTIIYTAGALGCTLTIVSDCLIQPENSVCCTPGIPAVSQQDKKRIFTRHPNIKYTILVYPCFCT TGLSPVDILKEETACITPTLEPPSSENSFPNSRLILLNAFQYDQKKPKEGVAHFANGGPFNMPELFLASSTTTTTPPNQH KLYGVFTTTILDIIEETQGRVTSVELAREALDKLRMQGIHQKPGLHSNDHHHAYASFLSAD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 39 | 200 | 162 | 1.9E-13 | – | |
| PANTHER | 74 | 196 | 123 | 1.6E-25 | – | |
| Pfam | 74 | 371 | 298 | 9.2E-17 | – | |
| PANTHER | 74 | 196 | 123 | 1.6E-25 | – | |
| PANTHER | 318 | 371 | 54 | 1.6E-25 | – | |
| PANTHER | 318 | 371 | 54 | 1.6E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0514500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…