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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0514500 |
| Transcript ID | LotjaGi3g1v0514500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TATA box-binding protein associated factor RNA polymerase I subunit B-like protein; TAIR: AT2G02955.1 maternal effect embryo arrest 12; Swiss-Prot: sp|Q5XVF0|MEE12_ARATH TATA box-binding protein-associated factor RNA polymerase I subunit B; TrEMBL-Plants: tr|I1LJ67|I1LJ67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0514500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93150018..93158099) extracted from Lotus japonicus Gifu genome v1.2.
TGACTATTTACCATTGGTTAAAAAAAAAGACTATTTACCATGAAAGTGTGATTGGTTATTTATCATGAATGATAAAAAAA ATTCCTTTTAACCAATTTATCCTCTTCTTCACATTTACCGAAGTTAACTTTAACAATTTACAACCACCGCCCCAGCGTCA CCGCCGCCTCAAAGCTTTCCCGATACGGTGGGTGAGGATGATGAAGAACAAGAAGATTGGGCCAATAGAGGAAAATTCAT GGGGAAAGGAGAAGAATGTGCCCGTAGAGGAAACTTTAAGGGAAAATAAAGCTCTGTTGATTGGATTGAAACACCCACAG ATGACTGATATTGATGATGTGAAAGAGAAGATATTGAGGATGAAGAAATTTCTGATGGATCTGCGAGGGTTTTCAGAGAA TAACATCACTCTCTTGATTGAAGATGGAGATCCAAACGAATCACAACCCACTGACTACAACATACGAGTAGAGACATGCT ATTTGGTTGAGCATGCTAAACCAGGTGACATCCTTTTCATCCACCTCATCGCCCATGGCTGCTCTGAAGGCAATATCACT ACTTCTGATAAAGTCCTCCTTCCAGGTATATATGGTATCCAAACAAACACACCTTAATTTATTAGAGAAATTAGAAAGCT TTTGTTATCATTATCTGATCAGTGAATCATCAATTCCATCCTTGATTGTGTCCATTGTAAATTAGTCTACAAACTTGACC ATGCTCACACTTTTAGAGACTTGTTAATAGCGCGCAATAGCACTATAGCGTAGCGCCCTGGGGTTCACCGCTACTCCACT ATTCATCGCTATTTGCCACTATTGTCCGCTATTTGCCGCTATAGCACTCGAAATAGCGTTTTTAGGGTGTGCCGCTACGC TACGCTATCCGCCATTAACAATTCAGGGACGAAAATGAGCGTTCACTCTTATTTAATTGATATTGCTGGCAGGCATTGGT ATATAATTCTTTGTTTTATGTGCTTGCTTGCTTGCAAACAGATAATCATTTCAGGACAATTATATACACTGCCGGCGCTT TAGGTTGTACCCTGACAATTGTCTCCGATTGCCTAATTCAACCTGAAAATTCTGTGTGTTGTACTCCGGGAATACCAGCG GTTAGTCAACAAGACAAGAAAAGAATTTTCACAAGACACCCAAATATTAAATATACCATTCTGGTATATCCGTGTTTTTG CACCACCGGTTTGTCTCCTGTTGATATCCTCAAGGAGGAAACAGCTTGCATAACTCCAACTCTCGAGCCCCCCTCATCCG AGAACAGCTTTCCAAATTCAAGATTAATTCTCTTGAATGCTTTCCAGTATGACCAGAAGAAGCCCAAAGAGGGAGTTGCT CACTTCGCCAACGGGGGACCCTTCAATATGCCAGAATTATTCTTAGCTTCTTCCACAACCACTACTACTCCTCCTAACCA ACACAAATTATATGGGGTTTTTACCACTACCATTCTTGATATAATTGAAGAGACTCAGGGACGTGTTACTAGTGTAGAGC TTGCGCGAGAGGCTCTGGATAAACTTAGGATGCAAGGTATTCATCAAAAGCCTGGACTGCATTCCAATGACCACCACCAT GCTTATGCCTCCTTTTTGTCCGCTGATTAGATAGCAGTATAGCACACTGAGTATATATATTATTTGAATGATGTCAATGT ACTATGTGAAGCGACATATGGTTTTTGGTCAGATGATCTGTTCTTGTTTAGTTATTTCAGGTTTCGTGTGTTCTTATTTA AATTTGCTATTTTTTCCTAGTGCTTTGGGATGTAAGAATTATGCGCGTTCAGTTCTATTAAATGCCTGATACAAAGTCTG AATCCAGTTATTCTCAGCTTCAAAATATTATTATTTTGCTATGATTGTAGTCTGATGACAGCCTTTGGTCTGAATCATAT GTTGTTTTGTACCCGTTTGAATGCAAACCTAAAAGCACTTATTGGAGCTTTTTTAGTGTATTTTTTTGTGGATAAGCTCC AATAAGCTTTAAAAAGCCCCTACCAAAGGGCTCAAGCTAAAGCTTGGTGACAGTTCTGCATTTTGTTTAAGCAGTTAATT GAAATTTAAACCTGAAGTGCTTTCCTTTCAAATTGGTCGTGCAATTATTAGTTTCTTGGATTTGTGGGTTTGCAGTACTA GTAATTCATGGTTCCATGCTTTAAACTTTTTCTTAGCCTAGAGTAAATGATGTGACCCCATAAACCTGAATGTTATTCTA GCTTACACTTTTGACACACAGCATTAAAACTGATTTGCTTTGGTGATTTACTAATAGGATTTGTGTGTATTTTGCATGTT AATGTTTCATGGGATGTACTCATTCTATTTTTTGTGCCATGAATTATTTTTTATCTGTTGTACATCTATTTTTATTTTTA TTTTTTTGTTAAATTGGACGGCAAAAGCCCAAAACAAACTACACTAATCTAGGGAAAGAGATCCCAGCAATATCATCCCC AAGACACACGCTCTAAGAAAAGCAGGAACATTAGAAGAATCAAACAGAAAATCCTGGACAACATGTCCTAGTTTAGCAAG CAGGTCTGCACTCCTATTTCCTCCCTAAAAATGAGGTGGAAGGAAACCTCCCAGCCACCACCAGCCAAGTCCAGAATGTC GTTGACAAGATCAGCACAAGGGTGAAAAGCTCCACTTGAAGTCTACCCACAGACAAAGATCTAGCAAGCCTTAGGCCCTT CAAGATACTCCAAAGTTCAGCTCTAATAGAAGAACTTAACCGGAGGAGAAACCCCAAAGCACTTTCCCCTTGAAATCCCT AATCAAACCACCACAAGCAGCTTTACAACTCTGATTAAGAACTGAGCCTTCAGTTTTGAGTTTCCAAACAACCAGAATAG AGCCATCATGTATACATCAATTTGATTAGTGATAAATGCTGATTTTGATGGACATGTTTACGTTTCAGTCTACTACCACT ATATATTGGGAAATGACATTTTCCGTTTTCATTCCCATATTCTGCTAGTTAAACTTTTCACATAATCAGGTTTGTCTTGT AAAGATGACTTTGCAGGCCAAGTGCTGATTGCAAATGAGATTAAAGATGAAGGTTAAGACTTAGATACAAAAAGTTTGCA AGAAGTGTGAATTTAGTTTAGGAGGGCACATCCTTACAATATGATTGGTTGATGATGTAAAAAAATTTACACTGTTAGTG CATCATCTTACAATATGATTGGTTAATGTTCATGTTGCGCAACGTTGAAACAATTAGATTTGATTATCATCTTGTGTACG TTTTTCAGCTTGGTTGTGGTTAAAAGCAAATAATAGAAACTTCCACCATGCAATTTTTTAGTGGTATTGTGAACCAATTT CATGTTTTGTAACATCATGACAATTGGTAGGTTCTAGAAACTTGCACTCACACTGAAGTGTGAGTTTTGATTGTAATCGG TCGAATACCCCTTTTACTCCCTTCCATAAATTGCTTATAAAAACATTTCATTTCAAAAAAAAAATTGCTTATAAAAAAAA TATTAGCTTATCTTCACCGGTACATGTGCTTGACTATATTGACTTCAAAATAAAGAAGTTTTGAAAAAAAAATTATAATA TTTTTGAAATTGTAAAAATAATAAAAAATGTGAATATTACTAAAATTGACAAATACTTATTTCCAAATGTAACATAAAAA ATTGATAAATAATAAAATAATTTATTTAATAAATAATTTCATATTTAAAAAAAAATGTAATTTTATATAAAAAAGTTACT TTTTTCTTGTTTGACCCTCTACATAAGCAAATAAAAGGAGGGAGATAGGTTTAATTTTGATTTTTGATTTTATTAAACAA CAAATTCTATTATATCTCAGTTCTCACTACTTCATCTCTTCTCACTTTCTTCCCTACACCAAACAAAACATTTTAGTAAT AAACAAATGGCTTGAACATATTTAACTAAGGAAATTGGGCTGAGAAACCGTCTTGAGAAGATAATCGGTGGCCCATCGTC GCCGTCACAAACCTCATACACCCGCGCCGTCAATACTCGCCATTCGCGTTCACCGCCGGCACCACCTGCCTTTTCTCTGT AATGGACGAGGTCCGTAACTTGACTTGTCAAAACTGTTACAACGTCGGAGCACGTGACGGTGACGACGGCTTCTTTTACT GCCTCCGCTGCGGCGAACGCTGCGAGGATGTTATCGACACCGCCGTCGATGACGATGATCTCTTCAATAAAGGAGGAGCC ACCGGCGCCATCTACATGCCCAGTCACCAACGCCAGCGACCTACTGCGATTAAAGCCGAACCCATCTCTCAGTATGACTC CTTCTATGATTCCCAGTCCAATTTCATCAAGAGTCTGGGTTTACAAGATGAAGCTGATATTGTCAAGGTTAAAAAAGAGG AAGATATTGACATGGACCAGTTTCGTGGGGAAACTCCAACGGAACCTGCAGATTTTGCTAAACGGAAGGTTGCAAGCTTT GAAGATTACCACAATGAGATAAGGATGCGGTATGTCATGGGGTTGCAGATGATGATTGAGCTTCAGTGTGAAGCGTTGGT CAAGGAGTTTAAGGTTACTCCTTTGGTTTGTGGCTTGGTTGGCTCAATTTGGTTGAGATTTGTCTCCAAGACTGGTGTAT TTGATGAAGATTGGGCTGAAAAAGTAATCCATGACTCTGAGATGCAGGAAGAAGGTAAGAATTTGAAGTTACCTTGCCTA TGTTTCTACATTCACATATACCCTTATTTGTTCATGGTCTGATTCTGTATTTACTAATTTGATGCATAATGTTGGTTTAG GATTGAGCATGATGTCTGAACTCTTGAATTTTTTTGCTTGTGACATATGTGGACTGAGTCTTATTCATGGAAGGTTCACT AGTAAATGCTTTCTGCTTCTATTGAAGTTTCATGGAACCTGATATTTAACCAAAATATTTTCTCTCTACTAGAAATCCTT TTTCTGATTTTTTACAACTCAATTTGGTATTCATAAAGCCTGGATTTGAGCCCTTAAGTATTTAATTTACTGTATCAATG ATCATATGAGAGGATGAGTTGATAATTTTCTACTAACGTTTCATGTAAACAATGTTTCTAAGATAATTTTCGTCATCACT CAGGAGCTGCGTGCCTTATTTTCATCGAGTATATTTTGTAAGTTTATTTTTTGTTTGGTATCAGGAGAAGCAGAAGATCA TATGCCGCGCTCTAAACATAGAGCAGAACCCCATAATATGTTTGGTCGGCGAGCTGTTATGATATGGTTTAGGACATTAA GGAATAGGATTCCACTTTCTTGTACTGTTGCCATTTCATATCTGGCATGTCATATTGCCAGGGAAGCTGTCCTGCCATCA GACATAATGAAGTGGACATGTGAAGGGAAGCTTCCATATTTTTCTGCTTTTGTTGAAATTGAAAGTCGCATGGGACCCCC ATCAATTGCATGTCCAATCAGTTCAAGCGTTATGTTCAAGCCTCAGCGAGCTGTTCCTGTGCGGAAGCTAGAGTTGTTTG CCTCTTCCATTGCTCAGTTCATAGGCCTTGAGTTACCTCCTGTTAACTTTTATGCAATAGCTTACCGTTATCTTGAAAAG TTGTCTCTTCCTGTGGAGAAGATTCTTCCTTACTCATGCCGTATATATGAATGGTCAATGCCTCCAGATTTGTGGTTATC CTTATCCAAAGATTGTTTTAAGCTACCTACTCATGTTTGTGTTGTATCAATTCTGGTTGTAGCCATAAGGATTTTGTACA ACATAAATGGTCTTGGAGAATGGGAGAAAAGTCTATCTCATATTGATGGTGCCAAAGGCAATGGTGATATGGGTAATCCT TTTGCCTCTCGTGGCGAACATGATTTTGGTAAAGATTCAGCTAAAGATCCAGTAGGACACAAGTTGGATTCTGCTTGGCT TCTCCAGCACCTCCAAACAAGATATATTACAGATTCTTGTGGTAAAGTTATTCTTTACTCTCATTTTTATCTTATTGAAC CTATGTTGCATGAGTTTATGTTCTCTTCTCCTATTTTGGCAACTAAATGACTTTCTAACAACAAGTATTTTTGGACAGAG TATTCAGAGGACTTACCTACCTATCTCAAATACTGTAGGGATGTTGTCTTTGCTGGATCAGAACCATCTTATGGCAATCA CGAGGAAGAAAAGATGATAGAACACCTATGGAACTTTTATCAGAACAAAGAGGTAATTATGACACTTGAATGAGTTATTC CTTTGGCATGTGGCCTATAGAATTATAATATCTTGGATTTACTTCGATCCTTTTTCCTTTTCTGTTGGCATGTGTTAAGA ACTTTGTGCCTGTGGTCTTTTGCCTTCATGACAACTGTTCTAAATTTTAGTTTCTTTCTGCGTGAAACTTGTAGAGTAAA TTGTCTTCATCACTATTTCCTAGATGACATTCAACTTCAAGAAAAATATCAAAAGAATGAAATAGTGTTCCTGCAAAAGT GAGGGGGCTCAAAATGCATAAATTAAGTGCCAGTCATTTATACATCTTTAAATACTGTTATTAAATTTTTATGAATTCAT TAGGTTAAGATTGCTAGAAATGAGAATGTTAAGATTGATGAGTGGCCACAACCCCACATTAGAAAGGATAGGATATGCAA TGATCGTATAAGATGAGATATTGTGGTTGTGCTTATTGTACAGAACCTGAAGGGTTGTATGGACATGTAGAAAGAAGATT TTGGAGGCACCAGTGAGAGGTGGATAACATGGTCTTTAGTCCTGTGAAGAGGGTAGAGGGAAGCCAAAAAGAGCATTATA ACATTGTTATAAATGACCTTATTATCAATAAGATCCCTCAAAATCTGGTTTTTTATCGAGTTCAATGGTGTAGAGTGATC CATATAGCGGATCTCACTCAATGGGATAAAGCTTTTGTTGTTGTATTATTTGATTATATTTACATGTGTTGAACTACAAT ATATCTGCATATGATTCCTATATCTTGATAGGGCTTAATTATGCTTCTCAGCATGATATTTCATTCTTTTGTTAGTACCT TCACTTTATGGGTTTACTGTGTTCTAAAGATGTGTAAATGAAGTCGTGAAGGTGTACTTTCGTATTCTCAACTAGTTGGC GACATAGTTTTAGATACTCACATACTAACTGCAGTATCTGTGGAGCTTATGCTTCTGCTAATGAAGCATACTTTATGAAT GTTCTCTTCCAAATATTCTGCTGATATAGGTTGAAAACTTTTATTTTCCATCATCTCTGATAAGCAGAATTTATCAAATA AAATTAAAATTTGACTCTTGTCTCTTTCTGTTACTTTTTTTCAGACTTCTAAACCATCACAAACGGAAGAGCAATCCAAT GCTTCTTTTTACCGAACAAAGTCGAGGGACAAAGGACGCAATAGAGGCACATCTAAGGAGGAAAATATGACAAAAGAATG TTTTCACGAAACAAATGACTTGTCTGGAAGTATTGGTAATGATCATTCTTCTGAGAGTTTGCCACACAGTAAGGACTCGG ATGAGTATGAACACAGTTCAGGAAAACCATCTGTGAAGGAAGCCATTAGAAAGATGAAATTAGACATGGAGGAAAACAGA TTTTGTTATATACCACCTAGAGTCGAGCGGAAAAGGCTGGATTACCTTCACTACTCAAGAAAGAGGGATGAAGGTGCCCT TACTTATGTTGCTCATGCTGATTATTACATTTTGCTTCGTGCTTTTGCCAGGGTTGCTCAAGTTGACATTCGAATTTTGG ATATTGGTGTGTTGAGCCTTGAGACAAGACTTGCTTGGTTGGAAAAACGGATTGATCATTGCTTTCATTCCAAGCCTCCC AAAAAGAATTGCCAGTTTTGTAGTGTTATGGCCTCTGAAATTGAATCTGGACTCTCAAATTTGAATATTTGAAAATCAAT TCTTTATTCTTAAAGTGTGTTTGGTTTAAGGGTTTTTCCAACACAGTTTTTCATTCCAACTGACTAAAGTTGTTGTTGGA TTGATAACATCCAATCCAATGAATAATGAACCCGCACTTCACCACTTAGAAATAGAAATGAGAAAGAATGTGTGCTTCAT AT
CDS sequence (LotjaGi3g1v0514500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAGGTCCGTAACTTGACTTGTCAAAACTGTTACAACGTCGGAGCACGTGACGGTGACGACGGCTTCTTTTACTG CCTCCGCTGCGGCGAACGCTGCGAGGATGTTATCGACACCGCCGTCGATGACGATGATCTCTTCAATAAAGGAGGAGCCA CCGGCGCCATCTACATGCCCAGTCACCAACGCCAGCGACCTACTGCGATTAAAGCCGAACCCATCTCTCAGTATGACTCC TTCTATGATTCCCAGTCCAATTTCATCAAGAGTCTGGGTTTACAAGATGAAGCTGATATTGTCAAGGTTAAAAAAGAGGA AGATATTGACATGGACCAGTTTCGTGGGGAAACTCCAACGGAACCTGCAGATTTTGCTAAACGGAAGGTTGCAAGCTTTG AAGATTACCACAATGAGATAAGGATGCGGTATGTCATGGGGTTGCAGATGATGATTGAGCTTCAGTGTGAAGCGTTGGTC AAGGAGTTTAAGGTTACTCCTTTGGTTTGTGGCTTGGTTGGCTCAATTTGGTTGAGATTTGTCTCCAAGACTGGTGTATT TGATGAAGATTGGGCTGAAAAAGTAATCCATGACTCTGAGATGCAGGAAGAAGGAGAAGCAGAAGATCATATGCCGCGCT CTAAACATAGAGCAGAACCCCATAATATGTTTGGTCGGCGAGCTGTTATGATATGGTTTAGGACATTAAGGAATAGGATT CCACTTTCTTGTACTGTTGCCATTTCATATCTGGCATGTCATATTGCCAGGGAAGCTGTCCTGCCATCAGACATAATGAA GTGGACATGTGAAGGGAAGCTTCCATATTTTTCTGCTTTTGTTGAAATTGAAAGTCGCATGGGACCCCCATCAATTGCAT GTCCAATCAGTTCAAGCGTTATGTTCAAGCCTCAGCGAGCTGTTCCTGTGCGGAAGCTAGAGTTGTTTGCCTCTTCCATT GCTCAGTTCATAGGCCTTGAGTTACCTCCTGTTAACTTTTATGCAATAGCTTACCGTTATCTTGAAAAGTTGTCTCTTCC TGTGGAGAAGATTCTTCCTTACTCATGCCGTATATATGAATGGTCAATGCCTCCAGATTTGTGGTTATCCTTATCCAAAG ATTGTTTTAAGCTACCTACTCATGTTTGTGTTGTATCAATTCTGGTTGTAGCCATAAGGATTTTGTACAACATAAATGGT CTTGGAGAATGGGAGAAAAGTCTATCTCATATTGATGGTGCCAAAGGCAATGGTGATATGGGTAATCCTTTTGCCTCTCG TGGCGAACATGATTTTGGTAAAGATTCAGCTAAAGATCCAGTAGGACACAAGTTGGATTCTGCTTGGCTTCTCCAGCACC TCCAAACAAGATATATTACAGATTCTTGTGAGTATTCAGAGGACTTACCTACCTATCTCAAATACTGTAGGGATGTTGTC TTTGCTGGATCAGAACCATCTTATGGCAATCACGAGGAAGAAAAGATGATAGAACACCTATGGAACTTTTATCAGAACAA AGAGACTTCTAAACCATCACAAACGGAAGAGCAATCCAATGCTTCTTTTTACCGAACAAAGTCGAGGGACAAAGGACGCA ATAGAGGCACATCTAAGGAGGAAAATATGACAAAAGAATGTTTTCACGAAACAAATGACTTGTCTGGAAGTATTGGTAAT GATCATTCTTCTGAGAGTTTGCCACACAGTAAGGACTCGGATGAGTATGAACACAGTTCAGGAAAACCATCTGTGAAGGA AGCCATTAGAAAGATGAAATTAGACATGGAGGAAAACAGATTTTGTTATATACCACCTAGAGTCGAGCGGAAAAGGCTGG ATTACCTTCACTACTCAAGAAAGAGGGATGAAGGTGCCCTTACTTATGTTGCTCATGCTGATTATTACATTTTGCTTCGT GCTTTTGCCAGGGTTGCTCAAGTTGACATTCGAATTTTGGATATTGGTGTGTTGAGCCTTGAGACAAGACTTGCTTGGTT GGAAAAACGGATTGATCATTGCTTTCATTCCAAGCCTCCCAAAAAGAATTGCCAGTTTTGTAGTGTTATGGCCTCTGAAA TTGAATCTGGACTCTCAAATTTGAATATTTGA
Protein sequence (LotjaGi3g1v0514500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEVRNLTCQNCYNVGARDGDDGFFYCLRCGERCEDVIDTAVDDDDLFNKGGATGAIYMPSHQRQRPTAIKAEPISQYDS FYDSQSNFIKSLGLQDEADIVKVKKEEDIDMDQFRGETPTEPADFAKRKVASFEDYHNEIRMRYVMGLQMMIELQCEALV KEFKVTPLVCGLVGSIWLRFVSKTGVFDEDWAEKVIHDSEMQEEGEAEDHMPRSKHRAEPHNMFGRRAVMIWFRTLRNRI PLSCTVAISYLACHIAREAVLPSDIMKWTCEGKLPYFSAFVEIESRMGPPSIACPISSSVMFKPQRAVPVRKLELFASSI AQFIGLELPPVNFYAIAYRYLEKLSLPVEKILPYSCRIYEWSMPPDLWLSLSKDCFKLPTHVCVVSILVVAIRILYNING LGEWEKSLSHIDGAKGNGDMGNPFASRGEHDFGKDSAKDPVGHKLDSAWLLQHLQTRYITDSCEYSEDLPTYLKYCRDVV FAGSEPSYGNHEEEKMIEHLWNFYQNKETSKPSQTEEQSNASFYRTKSRDKGRNRGTSKEENMTKECFHETNDLSGSIGN DHSSESLPHSKDSDEYEHSSGKPSVKEAIRKMKLDMEENRFCYIPPRVERKRLDYLHYSRKRDEGALTYVAHADYYILLR AFARVAQVDIRILDIGVLSLETRLAWLEKRIDHCFHSKPPKKNCQFCSVMASEIESGLSNLNI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 377 | 377 | - | – | |
| PANTHER | 1 | 688 | 688 | 3.0E-192 | ||
| Phobius | 378 | 396 | 19 | - | – | |
| Phobius | 397 | 703 | 307 | - | – | |
| MobiDBLite | 508 | 522 | 15 | - | – | |
| MobiDBLite | 508 | 585 | 78 | - | – | |
| MobiDBLite | 523 | 548 | 26 | - | – | |
| MobiDBLite | 549 | 564 | 16 | - | – | |
| MobiDBLite | 565 | 585 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase I CORE element sequence-specific DNA binding | Interacting selectively and non-covalently with the regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE. | ||
| Biological process | RNA polymerase I preinitiation complex assembly | The aggregation, arrangement and bonding together of proteins on promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription from an RNA polymerase I promoter. | ||
| Biological process | Transcription by RNA polymerase I | The synthesis of RNA from a DNA template by RNA polymerase I (RNAP I), originating at an RNAP I promoter. | ||
| Cellular component | RNA polymerase I core factor complex | A RNA polymerase I-specific transcription factor complex that is required for the transcription of rDNA by RNA polymerase I. In yeast the complex consists of Rrn6p, Rrn7p, and Rrn11p. |
Expression pattern of LotjaGi3g1v0514500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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