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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0514500 |
| Transcript ID | LotjaGi3g1v0514500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TATA box-binding protein associated factor RNA polymerase I subunit B-like protein; TAIR: AT2G02955.1 maternal effect embryo arrest 12; Swiss-Prot: sp|Q5XVF0|MEE12_ARATH TATA box-binding protein-associated factor RNA polymerase I subunit B; TrEMBL-Plants: tr|I1LJ67|I1LJ67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0514500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93150018..93162693) extracted from Lotus japonicus Gifu genome v1.2.
CAACATACGAGTGGAGACATGCTATTTGGTTGAGCATGCTAAACCAGGTGATATCCTCTTCATCCACCTAATCGCCCATG GCTGCTAAACCGTGTGTTGTACTCCTGGAAAACGAACGGTTAGTAAACAAGACAGGAAAAGGTTTTGCACAAGACACCCA AATGTTAAATTTATCCCAGAGGGATATTTGTGTTATTGCACCACCAGTTTGTCTCCTTTTGGTATCCTCAAGGACAAGGA GGAAACAACTTGCATAACTCCAACTCTCAAGACCCACTCATGGGAGAGCAGCTTTCCAAGTTCACGATTAATTCTCTTGA ATGCTTTCCAATGTCACCAGAAGAAGCCCAAAGAGGGAGTTGCTCCCTGCGCCAACGGGGGACCCTTCAATATGCCAGAA TTATTCTTAGCTTCTTCCACAACCACTACTACTCCTCCTAACCAACAACACAAATTATATGGGGTTTTTACCACTATCAT TCTTGATATAATTGAAGAGACTCAGGGACAAGTTACAAGTGTAGAGCTCGCACGAAAGGCTATGGATAAACTTAGGATGC AAGGTATTCATCAAAAGCCTGGACTGCATTCCAATGACCACCACCATGCTTATGCCTCCTTTTTGTCCGCTGATTAGATA GCACACTAGTATATATATTATTTGAATGATGTCAGTGTACTATGTGAAGGACATATGGTTTTTGGTCAGATTATCTGTTC TTGTTTAGTTATTTCAGGTTTCGTGTGTTCTCATTTAAATTTGCTAAATTTTATAGTGCTTTGCCTGATGCAAAGCTTGA ATCTAATACTATTATTTTGCTATGGTTGTAGTCTGATGACAGCGTTTGGTCTGAATCATATGTTGTTTGGTACCCATTTG AATGCAAACCAAAAAGCACTTATTGGAGCTTTTTTAGTGCATTTTTTGTCGATAAGCTCCAATAAGCTTTAAAAAGCCCC TACCAAAGGGCTCAAGCTAAAGCTTTGTGACATATAGGACAGTTCTGCATTTTGTTTAAGCAGTTAATTGAAATTTAAAC CTTAAGTGCTTTCCTTTTAAATTGGTCATGCATTTTTTTTTCCACTCCAAATTTTCAATTATGTACTTATTCTCGTTAGG TTATTTCGGAAACAGGTATATCTAGGATCTATGAATAAGTTTCTTGGTTTGTAGTTTTGCAATGTTAGTAATTCATGGTT CCATGCTTTAACCTTTTTCTTAGCCAAGAGTAAATGATGTGACCCCATAAACCTAAATGTTATTCTAGCTTACACTTTTG ACACACAGCATTAAAACTGATTTTCTTTTGTGATTTACTAATAGGATTTGTGTATATTTTGCATGTTAATGTTTCACTAC TCTGATTAAGAACTGACTAACTGAGCCATCAATGTTGAGTTTCCAAACACCCAGAATAGAGCCATCATGTATACATCTAT TTGATTAGTGATAAATGCTGATTTTGATGGACATGTTTACAAGTTTCAGTCTACTACCACTATATAATGCGAAATGACAT TTTCCGTTTTCGTTCCCATATTCTACTAGCTGGGCTTATCACATAATCAGCTTTGTCTGGTGACTGTGCAGGCCAATTAC AAATGAGATTAGAGATGAAAGTTAAGACTTAGATGCAAAAAGTTTGCAAGAAGTGTCACTTTAGTTTAGAAAATCAGATT ACATGTGCTGACTTTAGTTTGCAAGATGTGGTCAGGCCAAGGATGTGAGAAAATCAGTTTTTTTATTTAATTCCATTAAT TGACGTGACACATCTTTAGATTGACGGTATAAAAAAACTTCACATTTATTTGTGAGTGCATCATCATTTTTCTCGTTTAG AGCAGAAAGGTGCTTATAAATAGACTTGCGTAAATTCTCAAGTCCTTTTGCTTAATGTTCATGTTGCGCAACTTTGAAAC AAATAAGATTTGATTATCATCTTTTGTATATATATAATCATTCAACTTTTTTTTTAGACAAAATGCTTGAATGTGTGAAT GCAGGTTTTACAGACAGCAAAAAATTCAAATATGTTTTTTGAATTTGGATTCGCTGCAGTCAGGGGTATGTTCTCCCTTA AATTTTGTGTAGTAAAAAAACTAGTATGATAACACAACCATTAGGCCCCCATCTGAAACAAGCTTCAGACAATAAGCAAT GCATGTCTATCATCCACTTAGGAAAAATGCACTGTATGAACTAATTTGCTTAACCGTTCCCTTTCTTTTGAATCATAATG TCCCAGTACTAATTGATCTCTAGCAGAACTTTCTGAAGTGCTTCAGCAGCCAGACTGCCAGAGGGATGTACAAGCACTCC TGGCCGTCGGTATGCCTCTTGATCTTGACCAGCTCCTGGTCTTTAAATTCACTGATGGGCATTCCTTCTTCAGGATGAGA GAGTTGATGTTCAGCAAGGACTTTGAATACACTCTGAGCATTGGGTGTCAAACTTTGCAAAACTATTGTAGCTGTTTTGA CAGTCTGGCTGGCACTGCCATGTGCGAGAATCATCGGTTAAAACATGCCTTCAACCTTATAAGGAGAAAATGTAGGGACA TGATACCAGCACCAGTTGAACTGTGCGTGAGCCATATTCCTGTCCCAATACAGTGGGGCATTAACATGGTCAATAGAGGC AACAATACGAATATGGGTACAAGCAGCCAGGCGAGCAAGATAATGTTGTGTTTCATAGTCCCTTAATCCAGGTCCATCAG ACAACACAAACAAAACAATCGCCATCCACTAATTCCACTTCATCCCAAAATGTAAGAAGATATTGTTGTAGCTTCGTTGT GATTGTACTTCCATCCTCTGCCACACATCAAACGAATGTAATGTTCAATGGCTTTACTTAACATATTAATGATGCTATAC TAGTGTCCCTCTCTTACTGGTCTTAAAGCATTAATTAACTCCCTCTGTTGAATGTTGTGGCATAAAGCATATTCGACTTC AGAATTGCAAAATTTTGGAGTAAAAGATGCTGATTTGTGGTTGTTGACCCAAAAGTCCAGCCTTTTACATCTTGTGGAAG ACATGTTACTTACCAGTGCAATAAAAATTGAGAAATTCTTTCCCATGTATTGTGCTCTATGTATAACTAGTGCGTTTGAA GTATAGACACTTAAATATGTATTTAGCTGAACTTATAAGCTTTTTTTAGTTTATTTGATAAATTTCTTACTAGTTTATGG TTAAGCACTTACTTGATACGTTTATTGATATAAGTGTTTAATTAAATTATTTATCCAAACACAGCTTTAAATCCATAATC AACAAGTAGATTTACATGAGAAAAAAACATATATTTACTAAATCGTACTCTCCAATACTCTCCATGTGATTTACTTCAAG TTTTGTTTGATTTTTGGAGGAAGAATTATCAAAATATTGTCATGTTTTATCCTCCTATATTGTATCCTTTGATGTTACTT TTGTTGAAAGAAGTAGGAACATGATTGATGATTGCTGATTTTTTAGCAGGGGAAATATTATTATAAATTTTTTAGAGTTT TTTTTTTGGGTTGTTTTGATCAGGATGATCAATTTAAAAATTCTTCCATCAACAATTTTTTTTATAACATCAACAATTAT TATTAGTAGATCACTGATGACAATAAACACTTCTTAATTGTTTTTTTTTGTTACAAGAGGAAGGCTAAAAAGAAAGGACA ACTACGCTACAACATCTTTAAGAAGAGCTTCAATAACAAACGAGGGTGGTAAACGCCATTCGCGTCTTGCAGCGCCCTCC CTTGAAGCATGTTTCGCCAAACAATCTGCCGCATTGTTCTTTCCCCTGGGCACATGAGTAAGCTCCACATTCCAGCCCCA CTGAAGCATGGTTCTGATGCGAAGAATTGCATCCCTTGCCCAATAGGTGGTTACGTCGACATGTGACGTGCAGACGTTTA CTGCCTCCAAGCAATCCGAGTAGCAAGACAGCTCCCTGTGTCCTAAATTCCACGCCTGTTGGAGGCCCAATTCAATCCCC GCGAGCTCCGCTATGAACGCGTCGCCACCATCAACACCAAGTGAGATCCCCGAGAGCCAAGTGCCCGCAGCATCCCGGAA AACCGCTGCCGCACCCATGCGTTGTACCTCCTGCCTCCAACTGCCATCCACATAAACTGCAGGACGCGGTGTTGCTGGAG GTTGCGCAACAGACTGGTGAGGACCAGGTACCCTATAGCTTTCCATGTAAAATAATTTGGAGAACCGAATTAGTAGTTAA GAAAATATTTACTTATTTTGAAAAGAAAGGCATAGAGATGAGAGAGTTTTAGCAAAGATTCACAATCTCTTAAGTTTGGT TCAAAACAAATTAGGAGGAGATTGACTTATTGTAATGTACCAACTAACTTTTTTCAATTGAAAGAAACGAGAAAGAGCCG GGATCTCATGTTTGATTTCCTTAATTTACCCTTTATAAAAAAATGCTTATATATAAAAAACCCTTTATAAAAAAATAGTT ATAATATTTAAAAATCATAAAAATAATTTTAAAAAAGTAATTAATACTGAAATTTTTAAATAAAAATGTGATTAACTTAG AATAGAAATGTCGTAAAAGCTAAGAATGTGTGGTTGACTATTTACCATTGGTTAAAAAAAAAGACTATTTACCATGAAAG TGTGATTGGTTATTTATCATGAATGATAAAAAAAATTCCTTTTAACCAATTTATCCTCTTCTTCACATTTACCGAAGTTA ACTTTAACAATTTACAACCACCGCCCCAGCGTCACCGCCGCCTCAAAGCTTTCCCGATACGGTGGGTGAGGATGATGAAG AACAAGAAGATTGGGCCAATAGAGGAAAATTCATGGGGAAAGGAGAAGAATGTGCCCGTAGAGGAAACTTTAAGGGAAAA TAAAGCTCTGTTGATTGGATTGAAACACCCACAGATGACTGATATTGATGATGTGAAAGAGAAGATATTGAGGATGAAGA AATTTCTGATGGATCTGCGAGGGTTTTCAGAGAATAACATCACTCTCTTGATTGAAGATGGAGATCCAAACGAATCACAA CCCACTGACTACAACATACGAGTAGAGACATGCTATTTGGTTGAGCATGCTAAACCAGGTGACATCCTTTTCATCCACCT CATCGCCCATGGCTGCTCTGAAGGCAATATCACTACTTCTGATAAAGTCCTCCTTCCAGGTATATATGGTATCCAAACAA ACACACCTTAATTTATTAGAGAAATTAGAAAGCTTTTGTTATCATTATCTGATCAGTGAATCATCAATTCCATCCTTGAT TGTGTCCATTGTAAATTAGTCTACAAACTTGACCATGCTCACACTTTTAGAGACTTGTTAATAGCGCGCAATAGCACTAT AGCGTAGCGCCCTGGGGTTCACCGCTACTCCACTATTCATCGCTATTTGCCACTATTGTCCGCTATTTGCCGCTATAGCA CTCGAAATAGCGTTTTTAGGGTGTGCCGCTACGCTACGCTATCCGCCATTAACAATTCAGGGACGAAAATGAGCGTTCAC TCTTATTTAATTGATATTGCTGGCAGGCATTGGTATATAATTCTTTGTTTTATGTGCTTGCTTGCTTGCAAACAGATAAT CATTTCAGGACAATTATATACACTGCCGGCGCTTTAGGTTGTACCCTGACAATTGTCTCCGATTGCCTAATTCAACCTGA AAATTCTGTGTGTTGTACTCCGGGAATACCAGCGGTTAGTCAACAAGACAAGAAAAGAATTTTCACAAGACACCCAAATA TTAAATATACCATTCTGGTATATCCGTGTTTTTGCACCACCGGTTTGTCTCCTGTTGATATCCTCAAGGAGGAAACAGCT TGCATAACTCCAACTCTCGAGCCCCCCTCATCCGAGAACAGCTTTCCAAATTCAAGATTAATTCTCTTGAATGCTTTCCA GTATGACCAGAAGAAGCCCAAAGAGGGAGTTGCTCACTTCGCCAACGGGGGACCCTTCAATATGCCAGAATTATTCTTAG CTTCTTCCACAACCACTACTACTCCTCCTAACCAACACAAATTATATGGGGTTTTTACCACTACCATTCTTGATATAATT GAAGAGACTCAGGGACGTGTTACTAGTGTAGAGCTTGCGCGAGAGGCTCTGGATAAACTTAGGATGCAAGGTATTCATCA AAAGCCTGGACTGCATTCCAATGACCACCACCATGCTTATGCCTCCTTTTTGTCCGCTGATTAGATAGCAGTATAGCACA CTGAGTATATATATTATTTGAATGATGTCAATGTACTATGTGAAGCGACATATGGTTTTTGGTCAGATGATCTGTTCTTG TTTAGTTATTTCAGGTTTCGTGTGTTCTTATTTAAATTTGCTATTTTTTCCTAGTGCTTTGGGATGTAAGAATTATGCGC GTTCAGTTCTATTAAATGCCTGATACAAAGTCTGAATCCAGTTATTCTCAGCTTCAAAATATTATTATTTTGCTATGATT GTAGTCTGATGACAGCCTTTGGTCTGAATCATATGTTGTTTTGTACCCGTTTGAATGCAAACCTAAAAGCACTTATTGGA GCTTTTTTAGTGTATTTTTTTGTGGATAAGCTCCAATAAGCTTTAAAAAGCCCCTACCAAAGGGCTCAAGCTAAAGCTTG GTGACAGTTCTGCATTTTGTTTAAGCAGTTAATTGAAATTTAAACCTGAAGTGCTTTCCTTTCAAATTGGTCGTGCAATT ATTAGTTTCTTGGATTTGTGGGTTTGCAGTACTAGTAATTCATGGTTCCATGCTTTAAACTTTTTCTTAGCCTAGAGTAA ATGATGTGACCCCATAAACCTGAATGTTATTCTAGCTTACACTTTTGACACACAGCATTAAAACTGATTTGCTTTGGTGA TTTACTAATAGGATTTGTGTGTATTTTGCATGTTAATGTTTCATGGGATGTACTCATTCTATTTTTTGTGCCATGAATTA TTTTTTATCTGTTGTACATCTATTTTTATTTTTATTTTTTTGTTAAATTGGACGGCAAAAGCCCAAAACAAACTACACTA ATCTAGGGAAAGAGATCCCAGCAATATCATCCCCAAGACACACGCTCTAAGAAAAGCAGGAACATTAGAAGAATCAAACA GAAAATCCTGGACAACATGTCCTAGTTTAGCAAGCAGGTCTGCACTCCTATTTCCTCCCTAAAAATGAGGTGGAAGGAAA CCTCCCAGCCACCACCAGCCAAGTCCAGAATGTCGTTGACAAGATCAGCACAAGGGTGAAAAGCTCCACTTGAAGTCTAC CCACAGACAAAGATCTAGCAAGCCTTAGGCCCTTCAAGATACTCCAAAGTTCAGCTCTAATAGAAGAACTTAACCGGAGG AGAAACCCCAAAGCACTTTCCCCTTGAAATCCCTAATCAAACCACCACAAGCAGCTTTACAACTCTGATTAAGAACTGAG CCTTCAGTTTTGAGTTTCCAAACAACCAGAATAGAGCCATCATGTATACATCAATTTGATTAGTGATAAATGCTGATTTT GATGGACATGTTTACGTTTCAGTCTACTACCACTATATATTGGGAAATGACATTTTCCGTTTTCATTCCCATATTCTGCT AGTTAAACTTTTCACATAATCAGGTTTGTCTTGTAAAGATGACTTTGCAGGCCAAGTGCTGATTGCAAATGAGATTAAAG ATGAAGGTTAAGACTTAGATACAAAAAGTTTGCAAGAAGTGTGAATTTAGTTTAGGAGGGCACATCCTTACAATATGATT GGTTGATGATGTAAAAAAATTTACACTGTTAGTGCATCATCTTACAATATGATTGGTTAATGTTCATGTTGCGCAACGTT GAAACAATTAGATTTGATTATCATCTTGTGTACGTTTTTCAGCTTGGTTGTGGTTAAAAGCAAATAATAGAAACTTCCAC CATGCAATTTTTTAGTGGTATTGTGAACCAATTTCATGTTTTGTAACATCATGACAATTGGTAGGTTCTAGAAACTTGCA CTCACACTGAAGTGTGAGTTTTGATTGTAATCGGTCGAATACCCCTTTTACTCCCTTCCATAAATTGCTTATAAAAACAT TTCATTTCAAAAAAAAAATTGCTTATAAAAAAAATATTAGCTTATCTTCACCGGTACATGTGCTTGACTATATTGACTTC AAAATAAAGAAGTTTTGAAAAAAAAATTATAATATTTTTGAAATTGTAAAAATAATAAAAAATGTGAATATTACTAAAAT TGACAAATACTTATTTCCAAATGTAACATAAAAAATTGATAAATAATAAAATAATTTATTTAATAAATAATTTCATATTT AAAAAAAAATGTAATTTTATATAAAAAAGTTACTTTTTTCTTGTTTGACCCTCTACATAAGCAAATAAAAGGAGGGAGAT AGGTTTAATTTTGATTTTTGATTTTATTAAACAACAAATTCTATTATATCTCAGTTCTCACTACTTCATCTCTTCTCACT TTCTTCCCTACACCAAACAAAACATTTTAGTAATAAACAAATGGCTTGAACATATTTAACTAAGGAAATTGGGCTGAGAA ACCGTCTTGAGAAGATAATCGGTGGCCCATCGTCGCCGTCACAAACCTCATACACCCGCGCCGTCAATACTCGCCATTCG CGTTCACCGCCGGCACCACCTGCCTTTTCTCTGTAATGGACGAGGTCCGTAACTTGACTTGTCAAAACTGTTACAACGTC GGAGCACGTGACGGTGACGACGGCTTCTTTTACTGCCTCCGCTGCGGCGAACGCTGCGAGGATGTTATCGACACCGCCGT CGATGACGATGATCTCTTCAATAAAGGAGGAGCCACCGGCGCCATCTACATGCCCAGTCACCAACGCCAGCGACCTACTG CGATTAAAGCCGAACCCATCTCTCAGTATGACTCCTTCTATGATTCCCAGTCCAATTTCATCAAGAGTCTGGGTTTACAA GATGAAGCTGATATTGTCAAGGTTAAAAAAGAGGAAGATATTGACATGGACCAGTTTCGTGGGGAAACTCCAACGGAACC TGCAGATTTTGCTAAACGGAAGGTTGCAAGCTTTGAAGATTACCACAATGAGATAAGGATGCGGTATGTCATGGGGTTGC AGATGATGATTGAGCTTCAGTGTGAAGCGTTGGTCAAGGAGTTTAAGGTTACTCCTTTGGTTTGTGGCTTGGTTGGCTCA ATTTGGTTGAGATTTGTCTCCAAGACTGGTGTATTTGATGAAGATTGGGCTGAAAAAGTAATCCATGACTCTGAGATGCA GGAAGAAGGTAAGAATTTGAAGTTACCTTGCCTATGTTTCTACATTCACATATACCCTTATTTGTTCATGGTCTGATTCT GTATTTACTAATTTGATGCATAATGTTGGTTTAGGATTGAGCATGATGTCTGAACTCTTGAATTTTTTTGCTTGTGACAT ATGTGGACTGAGTCTTATTCATGGAAGGTTCACTAGTAAATGCTTTCTGCTTCTATTGAAGTTTCATGGAACCTGATATT TAACCAAAATATTTTCTCTCTACTAGAAATCCTTTTTCTGATTTTTTACAACTCAATTTGGTATTCATAAAGCCTGGATT TGAGCCCTTAAGTATTTAATTTACTGTATCAATGATCATATGAGAGGATGAGTTGATAATTTTCTACTAACGTTTCATGT AAACAATGTTTCTAAGATAATTTTCGTCATCACTCAGGAGCTGCGTGCCTTATTTTCATCGAGTATATTTTGTAAGTTTA TTTTTTGTTTGGTATCAGGAGAAGCAGAAGATCATATGCCGCGCTCTAAACATAGAGCAGAACCCCATAATATGTTTGGT CGGCGAGCTGTTATGATATGGTTTAGGACATTAAGGAATAGGATTCCACTTTCTTGTACTGTTGCCATTTCATATCTGGC ATGTCATATTGCCAGGGAAGCTGTCCTGCCATCAGACATAATGAAGTGGACATGTGAAGGGAAGCTTCCATATTTTTCTG CTTTTGTTGAAATTGAAAGTCGCATGGGACCCCCATCAATTGCATGTCCAATCAGTTCAAGCGTTATGTTCAAGCCTCAG CGAGCTGTTCCTGTGCGGAAGCTAGAGTTGTTTGCCTCTTCCATTGCTCAGTTCATAGGCCTTGAGTTACCTCCTGTTAA CTTTTATGCAATAGCTTACCGTTATCTTGAAAAGTTGTCTCTTCCTGTGGAGAAGATTCTTCCTTACTCATGCCGTATAT ATGAATGGTCAATGCCTCCAGATTTGTGGTTATCCTTATCCAAAGATTGTTTTAAGCTACCTACTCATGTTTGTGTTGTA TCAATTCTGGTTGTAGCCATAAGGATTTTGTACAACATAAATGGTCTTGGAGAATGGGAGAAAAGTCTATCTCATATTGA TGGTGCCAAAGGCAATGGTGATATGGGTAATCCTTTTGCCTCTCGTGGCGAACATGATTTTGGTAAAGATTCAGCTAAAG ATCCAGTAGGACACAAGTTGGATTCTGCTTGGCTTCTCCAGCACCTCCAAACAAGATATATTACAGATTCTTGTGGTAAA GTTATTCTTTACTCTCATTTTTATCTTATTGAACCTATGTTGCATGAGTTTATGTTCTCTTCTCCTATTTTGGCAACTAA ATGACTTTCTAACAACAAGTATTTTTGGACAGAGTATTCAGAGGACTTACCTACCTATCTCAAATACTGTAGGGATGTTG TCTTTGCTGGATCAGAACCATCTTATGGCAATCACGAGGAAGAAAAGATGATAGAACACCTATGGAACTTTTATCAGAAC AAAGAGGTAATTATGACACTTGAATGAGTTATTCCTTTGGCATGTGGCCTATAGAATTATAATATCTTGGATTTACTTCG ATCCTTTTTCCTTTTCTGTTGGCATGTGTTAAGAACTTTGTGCCTGTGGTCTTTTGCCTTCATGACAACTGTTCTAAATT TTAGTTTCTTTCTGCGTGAAACTTGTAGAGTAAATTGTCTTCATCACTATTTCCTAGATGACATTCAACTTCAAGAAAAA TATCAAAAGAATGAAATAGTGTTCCTGCAAAAGTGAGGGGGCTCAAAATGCATAAATTAAGTGCCAGTCATTTATACATC TTTAAATACTGTTATTAAATTTTTATGAATTCATTAGGTTAAGATTGCTAGAAATGAGAATGTTAAGATTGATGAGTGGC CACAACCCCACATTAGAAAGGATAGGATATGCAATGATCGTATAAGATGAGATATTGTGGTTGTGCTTATTGTACAGAAC CTGAAGGGTTGTATGGACATGTAGAAAGAAGATTTTGGAGGCACCAGTGAGAGGTGGATAACATGGTCTTTAGTCCTGTG AAGAGGGTAGAGGGAAGCCAAAAAGAGCATTATAACATTGTTATAAATGACCTTATTATCAATAAGATCCCTCAAAATCT GGTTTTTTATCGAGTTCAATGGTGTAGAGTGATCCATATAGCGGATCTCACTCAATGGGATAAAGCTTTTGTTGTTGTAT TATTTGATTATATTTACATGTGTTGAACTACAATATATCTGCATATGATTCCTATATCTTGATAGGGCTTAATTATGCTT CTCAGCATGATATTTCATTCTTTTGTTAGTACCTTCACTTTATGGGTTTACTGTGTTCTAAAGATGTGTAAATGAAGTCG TGAAGGTGTACTTTCGTATTCTCAACTAGTTGGCGACATAGTTTTAGATACTCACATACTAACTGCAGTATCTGTGGAGC TTATGCTTCTGCTAATGAAGCATACTTTATGAATGTTCTCTTCCAAATATTCTGCTGATATAGGTTGAAAACTTTTATTT TCCATCATCTCTGATAAGCAGAATTTATCAAATAAAATTAAAATTTGACTCTTGTCTCTTTCTGTTACTTTTTTTCAGAC TTCTAAACCATCACAAACGGAAGAGCAATCCAATGCTTCTTTTTACCGAACAAAGTCGAGGGACAAAGGACGCAATAGAG GCACATCTAAGGAGGAAAATATGACAAAAGAATGTTTTCACGAAACAAATGACTTGTCTGGAAGTATTGGTAATGATCAT TCTTCTGAGAGTTTGCCACACAGTAAGGACTCGGATGAGTATGAACACAGTTCAGGAAAACCATCTGTGAAGGAAGCCAT TAGAAAGATGAAATTAGACATGGAGGAAAACAGATTTTGTTATATACCACCTAGAGTCGAGCGGAAAAGGCTGGATTACC TTCACTACTCAAGAAAGAGGGATGAAGGTGCCCTTACTTATGTTGCTCATGCTGATTATTACATTTTGCTTCGTGCTTTT GCCAGGGTTGCTCAAGTTGACATTCGAATTTTGGATATTGGTGTGTTGAGCCTTGAGACAAGACTTGCTTGGTTGGAAAA ACGGATTGATCATTGCTTTCATTCCAAGCCTCCCAAAAAGAATTGCCAGTTTTGTAGTGTTATGGCCTCTGAAATTGAAT CTGGACTCTCAAATTTGAATATTTGAAAATCAATTCTTTATTCTTAAAGTGTGTTTGGTTTAAGGGTTTTTCCAACACAG TTTTTCATTCCAACTGACTAAAGTTGTTGTTGGATTGATAACATCCAATCCAATGAATAATGAACCCGCACTTCACCACT TAGAAATAGAAATGAGAAAGAATGTGTGCTTCATAT
CDS sequence (LotjaGi3g1v0514500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAGGTCCGTAACTTGACTTGTCAAAACTGTTACAACGTCGGAGCACGTGACGGTGACGACGGCTTCTTTTACTG CCTCCGCTGCGGCGAACGCTGCGAGGATGTTATCGACACCGCCGTCGATGACGATGATCTCTTCAATAAAGGAGGAGCCA CCGGCGCCATCTACATGCCCAGTCACCAACGCCAGCGACCTACTGCGATTAAAGCCGAACCCATCTCTCAGTATGACTCC TTCTATGATTCCCAGTCCAATTTCATCAAGAGTCTGGGTTTACAAGATGAAGCTGATATTGTCAAGGTTAAAAAAGAGGA AGATATTGACATGGACCAGTTTCGTGGGGAAACTCCAACGGAACCTGCAGATTTTGCTAAACGGAAGGTTGCAAGCTTTG AAGATTACCACAATGAGATAAGGATGCGGTATGTCATGGGGTTGCAGATGATGATTGAGCTTCAGTGTGAAGCGTTGGTC AAGGAGTTTAAGGTTACTCCTTTGGTTTGTGGCTTGGTTGGCTCAATTTGGTTGAGATTTGTCTCCAAGACTGGTGTATT TGATGAAGATTGGGCTGAAAAAGTAATCCATGACTCTGAGATGCAGGAAGAAGGAGAAGCAGAAGATCATATGCCGCGCT CTAAACATAGAGCAGAACCCCATAATATGTTTGGTCGGCGAGCTGTTATGATATGGTTTAGGACATTAAGGAATAGGATT CCACTTTCTTGTACTGTTGCCATTTCATATCTGGCATGTCATATTGCCAGGGAAGCTGTCCTGCCATCAGACATAATGAA GTGGACATGTGAAGGGAAGCTTCCATATTTTTCTGCTTTTGTTGAAATTGAAAGTCGCATGGGACCCCCATCAATTGCAT GTCCAATCAGTTCAAGCGTTATGTTCAAGCCTCAGCGAGCTGTTCCTGTGCGGAAGCTAGAGTTGTTTGCCTCTTCCATT GCTCAGTTCATAGGCCTTGAGTTACCTCCTGTTAACTTTTATGCAATAGCTTACCGTTATCTTGAAAAGTTGTCTCTTCC TGTGGAGAAGATTCTTCCTTACTCATGCCGTATATATGAATGGTCAATGCCTCCAGATTTGTGGTTATCCTTATCCAAAG ATTGTTTTAAGCTACCTACTCATGTTTGTGTTGTATCAATTCTGGTTGTAGCCATAAGGATTTTGTACAACATAAATGGT CTTGGAGAATGGGAGAAAAGTCTATCTCATATTGATGGTGCCAAAGGCAATGGTGATATGGGTAATCCTTTTGCCTCTCG TGGCGAACATGATTTTGGTAAAGATTCAGCTAAAGATCCAGTAGGACACAAGTTGGATTCTGCTTGGCTTCTCCAGCACC TCCAAACAAGATATATTACAGATTCTTGTGAGTATTCAGAGGACTTACCTACCTATCTCAAATACTGTAGGGATGTTGTC TTTGCTGGATCAGAACCATCTTATGGCAATCACGAGGAAGAAAAGATGATAGAACACCTATGGAACTTTTATCAGAACAA AGAGACTTCTAAACCATCACAAACGGAAGAGCAATCCAATGCTTCTTTTTACCGAACAAAGTCGAGGGACAAAGGACGCA ATAGAGGCACATCTAAGGAGGAAAATATGACAAAAGAATGTTTTCACGAAACAAATGACTTGTCTGGAAGTATTGGTAAT GATCATTCTTCTGAGAGTTTGCCACACAGTAAGGACTCGGATGAGTATGAACACAGTTCAGGAAAACCATCTGTGAAGGA AGCCATTAGAAAGATGAAATTAGACATGGAGGAAAACAGATTTTGTTATATACCACCTAGAGTCGAGCGGAAAAGGCTGG ATTACCTTCACTACTCAAGAAAGAGGGATGAAGGTGCCCTTACTTATGTTGCTCATGCTGATTATTACATTTTGCTTCGT GCTTTTGCCAGGGTTGCTCAAGTTGACATTCGAATTTTGGATATTGGTGTGTTGAGCCTTGAGACAAGACTTGCTTGGTT GGAAAAACGGATTGATCATTGCTTTCATTCCAAGCCTCCCAAAAAGAATTGCCAGTTTTGTAGTGTTATGGCCTCTGAAA TTGAATCTGGACTCTCAAATTTGAATATTTGA
Protein sequence (LotjaGi3g1v0514500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEVRNLTCQNCYNVGARDGDDGFFYCLRCGERCEDVIDTAVDDDDLFNKGGATGAIYMPSHQRQRPTAIKAEPISQYDS FYDSQSNFIKSLGLQDEADIVKVKKEEDIDMDQFRGETPTEPADFAKRKVASFEDYHNEIRMRYVMGLQMMIELQCEALV KEFKVTPLVCGLVGSIWLRFVSKTGVFDEDWAEKVIHDSEMQEEGEAEDHMPRSKHRAEPHNMFGRRAVMIWFRTLRNRI PLSCTVAISYLACHIAREAVLPSDIMKWTCEGKLPYFSAFVEIESRMGPPSIACPISSSVMFKPQRAVPVRKLELFASSI AQFIGLELPPVNFYAIAYRYLEKLSLPVEKILPYSCRIYEWSMPPDLWLSLSKDCFKLPTHVCVVSILVVAIRILYNING LGEWEKSLSHIDGAKGNGDMGNPFASRGEHDFGKDSAKDPVGHKLDSAWLLQHLQTRYITDSCEYSEDLPTYLKYCRDVV FAGSEPSYGNHEEEKMIEHLWNFYQNKETSKPSQTEEQSNASFYRTKSRDKGRNRGTSKEENMTKECFHETNDLSGSIGN DHSSESLPHSKDSDEYEHSSGKPSVKEAIRKMKLDMEENRFCYIPPRVERKRLDYLHYSRKRDEGALTYVAHADYYILLR AFARVAQVDIRILDIGVLSLETRLAWLEKRIDHCFHSKPPKKNCQFCSVMASEIESGLSNLNI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 377 | 377 | - | – | |
| PANTHER | 1 | 688 | 688 | 3.0E-192 | ||
| Phobius | 378 | 396 | 19 | - | – | |
| Phobius | 397 | 703 | 307 | - | – | |
| MobiDBLite | 508 | 522 | 15 | - | – | |
| MobiDBLite | 508 | 585 | 78 | - | – | |
| MobiDBLite | 523 | 548 | 26 | - | – | |
| MobiDBLite | 549 | 564 | 16 | - | – | |
| MobiDBLite | 565 | 585 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase I CORE element sequence-specific DNA binding | Interacting selectively and non-covalently with the regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery. This site is often referred to as the CORE element. In mammalian cells, the CORE element functions in conjunction with the Upstream Control Element (UCE), while in fungi, protozoa, and plants, the CORE element functions without a UCE. | ||
| Biological process | RNA polymerase I preinitiation complex assembly | The aggregation, arrangement and bonding together of proteins on promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription from an RNA polymerase I promoter. | ||
| Biological process | Transcription by RNA polymerase I | The synthesis of RNA from a DNA template by RNA polymerase I (RNAP I), originating at an RNAP I promoter. | ||
| Cellular component | RNA polymerase I core factor complex | A RNA polymerase I-specific transcription factor complex that is required for the transcription of rDNA by RNA polymerase I. In yeast the complex consists of Rrn6p, Rrn7p, and Rrn11p. |
Expression pattern of LotjaGi3g1v0514500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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