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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0515100 |
| Transcript ID | LotjaGi3g1v0515100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyol transporter; TAIR: AT3G18830.1 polyol/monosaccharide transporter 5; Swiss-Prot: sp|Q8VZ80|PLT5_ARATH Polyol transporter 5; TrEMBL-Plants: tr|G7JJX1|G7JJX1_MEDTR Polyol/monosaccharide transporter 1; Found in the gene: LotjaGi3g1v0515100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93232588..93235102) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGAGGGTGAAGCAGCAGCTGGGAAATCTCTTAGGGATTTTGATCCTCAAAAGAAACCCAAAAGGAACAAGTTTGC TTTGGCTTGTGCCATTCTAGCTTCCATGACTTCCATCCTACTTGGTTATGGTGAGCAAGCACAACTACACATAACACCAT TTCATTCAATTCTATTAGCTAGTAGTATCTTACTGTAACTATAATTTTGGTTGTCTTTGATCCTAGCTTTTTTAGTTCAG TTTTTCCTCTTTTCAAAATTAACTCTATTTCTTAGAAATGACTTTTATTTTTCTGAATAAAACCAATTTTGAGGAGAAAC TCATATGAGTAGCTTCTAAATTTGAGAACTAGCATGTTATGATGTTGTGTTATGTTACAGATATTGGTGTGATGAGTGGA GCAGTCATCTACATAAAAAGGGACCTTAAAATCTCCGACGTGCAAATCGAAATCCTGTCCGGAATCATGAACATTTACTC TCCGATAGGCTCTTACATAGCCGGCAGAACCTCCGACTGGATTGGTCGGCGTTACACAATCGTGCTTGCCGGTTTGATTT TCTTCGTGGGAGCCATCTTGATGGGATTTTCTCCCAACTATGCGTTTCTCATGTTTGGCCGCTTCGTCGCCGGCGTTGGC ATTGGTTTCGCGTTCCTCATTGCCCCTGTCTACACCTCTGAAATCTCTCCAACTTTGTCTCGTGGCTTCCTCACTTCATT GCCTGAGGTCAGTTTAATTTCTACATAAATTCTCAGCAATATCACTCTTTGCTTCTCAGTTCTTAGGATAAGGATTGGTT GATTCATTGAGGTCTATAAGTCGGTGTGGAATTTTCAAAAGCATGTTATGAGAGTCACTCAAGGTCATACTTGATGGCGA GATGAAGACAAACATGGAGTTTGTCTTTTATTGTCTACACTGATCACACAACACTATATGTCACTCTCATACTTGTAAGT GAGATGAAGTCTGTCTTCTGTCTTCTTCTAGCAAATTTCCAACAATACAGTGGTCCCTCTATATTTTTTTTTAACATCGG AAAATATTATTGAATCAATTTAACTAATATTTTTTAGTTCAAACCAGCATCCCAAACAAAAGATGGGAAATGTAAACATG ATAAGTTATTTTCAAAAAAATTAATAAACCCTATGTGTAAATGGAAAAAAACATTGTGCTTAAACAACCCGTGCTCACCT AAGTGCCTATTTGGATTTTAGCTCACTATAACGTTAACAAATTTATTTTCATCTCAATTCATAAGAAAAGTTTCTTTCGA ATTTTGGTTTCTAAGTTAGTGCTAACATATGTTTGGAATTGTCATACTTATCCAAACATTAGCTAGCTAAATTCAAGTTC AGAATTTTGCTATTTTATTTGTTCATAAAAAAATATGACTAAATCTAACAATAACATGTTGTTTTTCAGGTTTTTCTAAA TGCGGGAATCTTAATCGGATACATATCAAACTACACATTTTCCAAGCTACCACTCCGCCTAGGCTGGCGCCTCATGCTTG GAATCGGTGCTATCCCCTCCATATTTCTCGCTGTGGTAGTGCTAGCCATGCCGGAGTCACCAAGGTGGCTCGTTGCCAAG GGTCGCATTGGAGAAGCTAGAAAAGTCCTCAACAAAATCTCTGACTCCAAGGAAGAGGCTCACCTCAGGCTAGTCGATAT CAAACACCAAACTGGAATCCCCGAGGATTGCAATGACGAGGTTGTTCAGCTAAACAACCAAGTTCAAGTCCAAGGCAAGG GTGTGTGGAGAGAACTTTTTCTTCATCCCACCCCCGCAGTTCGTCACATTTTCATCGCCTCCCTCGGGATTCATTTCTTC GCACAAGCCACTGGCATAGACGCTGTTGTTTTGTACAGCCCCAGAATCTTTGAGAAGGCAGGGATCAAATCAGACACATA CAAGCTCCTTGCAACGGTAGCTGTTGGATTCGTGAAAACCTTGTCCATTTTATTGGCTACATTTTTGTTGGACGGTGTCG GGCGACGCGTGTTGTTGTTGACCAGTGTGGGTGGGTTGGTCCTTTCACTTATGACCCTTGGGGCGAGTCTCACTGTCGTT GACCACTCACATGTCACATGGGCCCTTGGGCTCAGCATCGCTGCGGTGTTATCCTACGTGGCCACTTTCTCCATTGGGTC AGGGCCCATTACATGGGTTTATAGTTCTGAGATATTTCCTCTGAGGCTTCGTGCTCAAGGTGTGGCTATTGGGGCTGTGG TGAATAGGCTCACCAGTGGGGTTATCTCAATGACCTTTTTGTCCCTCTCTAATGCAATCACTATTGGAGGCGCTTTCTTT CTTTTTGCGGGAATTGCAGTTTGCGCGTGGATTTTTCACTACACATTGCTCCCTGAAACACGTGGCAAGACTCTAGAGGA AATAGAAGGGTCTTTTGGTCATTTCTGGAGAAAGCCTAATGCCGCCAAAGAAGTTAACGGTAGAAACAATTTTATTAACC AAGTCAAATTAAGTACAAATGCTGACAACAAATAG
CDS sequence (LotjaGi3g1v0515100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGGTGAAGCAGCAGCTGGGAAATCTCTTAGGGATTTTGATCCTCAAAAGAAACCCAAAAGGAACAAGTTTGC TTTGGCTTGTGCCATTCTAGCTTCCATGACTTCCATCCTACTTGGTTATGATATTGGTGTGATGAGTGGAGCAGTCATCT ACATAAAAAGGGACCTTAAAATCTCCGACGTGCAAATCGAAATCCTGTCCGGAATCATGAACATTTACTCTCCGATAGGC TCTTACATAGCCGGCAGAACCTCCGACTGGATTGGTCGGCGTTACACAATCGTGCTTGCCGGTTTGATTTTCTTCGTGGG AGCCATCTTGATGGGATTTTCTCCCAACTATGCGTTTCTCATGTTTGGCCGCTTCGTCGCCGGCGTTGGCATTGGTTTCG CGTTCCTCATTGCCCCTGTCTACACCTCTGAAATCTCTCCAACTTTGTCTCGTGGCTTCCTCACTTCATTGCCTGAGGTT TTTCTAAATGCGGGAATCTTAATCGGATACATATCAAACTACACATTTTCCAAGCTACCACTCCGCCTAGGCTGGCGCCT CATGCTTGGAATCGGTGCTATCCCCTCCATATTTCTCGCTGTGGTAGTGCTAGCCATGCCGGAGTCACCAAGGTGGCTCG TTGCCAAGGGTCGCATTGGAGAAGCTAGAAAAGTCCTCAACAAAATCTCTGACTCCAAGGAAGAGGCTCACCTCAGGCTA GTCGATATCAAACACCAAACTGGAATCCCCGAGGATTGCAATGACGAGGTTGTTCAGCTAAACAACCAAGTTCAAGTCCA AGGCAAGGGTGTGTGGAGAGAACTTTTTCTTCATCCCACCCCCGCAGTTCGTCACATTTTCATCGCCTCCCTCGGGATTC ATTTCTTCGCACAAGCCACTGGCATAGACGCTGTTGTTTTGTACAGCCCCAGAATCTTTGAGAAGGCAGGGATCAAATCA GACACATACAAGCTCCTTGCAACGGTAGCTGTTGGATTCGTGAAAACCTTGTCCATTTTATTGGCTACATTTTTGTTGGA CGGTGTCGGGCGACGCGTGTTGTTGTTGACCAGTGTGGGTGGGTTGGTCCTTTCACTTATGACCCTTGGGGCGAGTCTCA CTGTCGTTGACCACTCACATGTCACATGGGCCCTTGGGCTCAGCATCGCTGCGGTGTTATCCTACGTGGCCACTTTCTCC ATTGGGTCAGGGCCCATTACATGGGTTTATAGTTCTGAGATATTTCCTCTGAGGCTTCGTGCTCAAGGTGTGGCTATTGG GGCTGTGGTGAATAGGCTCACCAGTGGGGTTATCTCAATGACCTTTTTGTCCCTCTCTAATGCAATCACTATTGGAGGCG CTTTCTTTCTTTTTGCGGGAATTGCAGTTTGCGCGTGGATTTTTCACTACACATTGCTCCCTGAAACACGTGGCAAGACT CTAGAGGAAATAGAAGGGTCTTTTGGTCATTTCTGGAGAAAGCCTAATGCCGCCAAAGAAGTTAACGGTAGAAACAATTT TATTAACCAAGTCAAATTAAGTACAAATGCTGACAACAAATAG
Protein sequence (LotjaGi3g1v0515100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEGEAAAGKSLRDFDPQKKPKRNKFALACAILASMTSILLGYDIGVMSGAVIYIKRDLKISDVQIEILSGIMNIYSPIG SYIAGRTSDWIGRRYTIVLAGLIFFVGAILMGFSPNYAFLMFGRFVAGVGIGFAFLIAPVYTSEISPTLSRGFLTSLPEV FLNAGILIGYISNYTFSKLPLRLGWRLMLGIGAIPSIFLAVVVLAMPESPRWLVAKGRIGEARKVLNKISDSKEEAHLRL VDIKHQTGIPEDCNDEVVQLNNQVQVQGKGVWRELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKS DTYKLLATVAVGFVKTLSILLATFLLDGVGRRVLLLTSVGGLVLSLMTLGASLTVVDHSHVTWALGLSIAAVLSYVATFS IGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRLTSGVISMTFLSLSNAITIGGAFFLFAGIAVCAWIFHYTLLPETRGKT LEEIEGSFGHFWRKPNAAKEVNGRNNFINQVKLSTNADNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 11 | 508 | 498 | 1.5E-273 | – | |
| PANTHER | 11 | 508 | 498 | 1.5E-273 | – | |
| SUPERFAMILY | 16 | 485 | 470 | 6.67E-69 | ||
| TIGRFAM | 19 | 484 | 466 | 2.8E-97 | ||
| Gene3D | 21 | 490 | 470 | 6.8E-125 | – | |
| Phobius | 26 | 54 | 29 | - | – | |
| TMHMM | 26 | 48 | 23 | - | – | |
| Pfam | 30 | 486 | 457 | 2.8E-103 | ||
| ProSiteProfiles | 30 | 477 | 448 | 48.044 | ||
| CDD | 33 | 484 | 452 | 0.0 | – | |
| PRINTS | 38 | 48 | 11 | 1.5E-21 | ||
| Phobius | 55 | 65 | 11 | - | – | |
| Phobius | 66 | 83 | 18 | - | – | |
| Phobius | 84 | 94 | 11 | - | – | |
| ProSitePatterns | 84 | 101 | 18 | - | ||
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 95 | 113 | 19 | - | – | |
| Phobius | 114 | 118 | 5 | - | – | |
| Phobius | 119 | 141 | 23 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| PRINTS | 121 | 140 | 20 | 1.5E-21 | ||
| ProSitePatterns | 126 | 151 | 26 | - | ||
| Phobius | 142 | 152 | 11 | - | – | |
| Phobius | 153 | 171 | 19 | - | – | |
| TMHMM | 157 | 176 | 20 | - | – | |
| Phobius | 172 | 182 | 11 | - | – | |
| Phobius | 183 | 206 | 24 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 207 | 285 | 79 | - | – | |
| Phobius | 286 | 305 | 20 | - | – | |
| TMHMM | 286 | 308 | 23 | - | – | |
| PRINTS | 297 | 307 | 11 | 1.5E-21 | ||
| Phobius | 306 | 324 | 19 | - | – | |
| Phobius | 325 | 346 | 22 | - | – | |
| TMHMM | 325 | 344 | 20 | - | – | |
| Phobius | 347 | 352 | 6 | - | – | |
| Phobius | 353 | 375 | 23 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 376 | 380 | 5 | - | – | |
| Phobius | 381 | 402 | 22 | - | – | |
| TMHMM | 383 | 402 | 20 | - | – | |
| PRINTS | 389 | 410 | 22 | 1.5E-21 | ||
| Phobius | 403 | 422 | 20 | - | – | |
| PRINTS | 412 | 424 | 13 | 1.5E-21 | ||
| Phobius | 423 | 443 | 21 | - | – | |
| Phobius | 444 | 448 | 5 | - | – | |
| TMHMM | 448 | 470 | 23 | - | – | |
| Phobius | 449 | 473 | 25 | - | – | |
| Phobius | 474 | 520 | 47 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0515100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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