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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0521700 |
| Transcript ID | LotjaGi3g1v0521700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Senescence/dehydration-associated-like protein; TAIR: AT2G17840.1 Senescence/dehydration-associated protein-like protein; Swiss-Prot: sp|O48832|ERD7_ARATH Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic; TrEMBL-Plants: tr|A0A072UN80|A0A072UN80_MEDTR Senescence/dehydration-associated-like protein; Found in the gene: LotjaGi3g1v0521700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93835170..93839648) extracted from Lotus japonicus Gifu genome v1.2.
GTAACTACCTGACACTCCAACGAATGAGATGTCAGTGTCACATCACTCCACCGCCACGTCCTTTCTCTCCGACGGGATGT TATGTCGATATTTGTCTCTTTGCTTATAAATTTCTTGTATTCATCCTCATCATCATTCATTCTTCTTCACTACAAAACTA TCATAGTTTTCTCACAATCACAACACAATAACCATAACCATGTCTCTTCCTCATCAATCTCTCTACCCACAAGTTCACTC CACTAACCCAGACGCAAACTCCCCTTTCTCTCACGCTTCAACCTCCTCTTCAATGTATCCCTCAGTCGGCAATCCCACCA CGGCGCAGCAGCCATCGGAGCATGTTCTCGTCACCGTCCCCGGCGTGATTCTGCATCTCATAGAAAAAGACTCCAGCGTC CACCTCGCTTCCGGCGACCTCAACATAATAAGCCTCATGGAAGGGGACAGAGTCGTCACTGTTTTGGCCTCCGTTGGTGA TCAAGTTCAGTGGCCGTTAGCTAAGGACGTTTCAGCGGTGAAGCTTGATGACTCTCACTATTTCTTCACGATTAGAGTTC CAAAGGAGGGTGGAGAGTTTGAAGTGCTGAACTATGGTGTCACCGTGGCAGCGGAAGGGAGAGGAAGAGGGAAGGAACTC GATGAGGTTCTGGAGAAGTACTGTTTTCTGTCGGTGGAGAAGGTGGAGGGTTTGGGAAATTGGGCGGTGTTGAAATCAGA GGAGAAGGGAGTGGCGGTGGAGGAGAAATCGGCGGCGTATTGGACCACGTTGGCTCCAAACGTGGAGGATTACAGCAGCC GTTTCGCGAGGTGGATAGCTTCTGGGTCGGGTCAGATGGTGAGGGGGATTCTCTGGTGTGGGGATGTTACTGTGGATAGG TTGAAATGGGGGAATGATTTCTTGAAGAAGAGGTTGCAGCCTGGTGAAAAGAACTCACAAATCAGTCCCCAAGCCATGGA GAGAATGAAAAGGTAAATTCCAAATTCCAATCCTACTTTGTTTGTGTCAATTTTGATTTTTCATTCATTGTGTATTCTGA ATTTTGATGTTATGGGGGTTTTTGACTTTTCAGGGTTAAGAATTTGACTAAGATGTCAGAGAAAGTGGCCCTTGGAATTC TCTCAGGGGTTGTGAAGGTGTCTGGATTCTTCACTAGTTCAGTAGTCAACTCTAAACCGGGAAAGAAATTCTTCAGCCTT CTTCCCGGAGAAATTGTTCTTGCTTCCATGGATGGATTCAGTAAGTTAGACATATCTCTGGCTTTATGTGCTTGGTATCT GCTGTAAGCCACATGTCAAAACATGCCAATATGGATTGTTAAGTGTTGAGATTTGGAAACAAATTAAGTGCATATTTAGA AACGCTTTTAGTATTGATGATAATTTGATAATGCTATATTTACAAACCCTTCTAGAATTGATTATGAAGCTAGAATCAAT TATGAAGATAATGAGTAGCTTCTTAGTTTTAGAATTGATTATGATGAAAGGGAGGTTGGTAAAAAATTCTATATATCTAC ACTATTTGATGTGGGGAATCAATGCAAGAGAGGATAAAAAAGTGGGATAAGTTGGTAGAAGCTTTGAAGATAGGGAACAT CTTACCCTACAATGCACTGCACTCTTGAAATGTGGCTTTTGGGCTCAGTGTTCATGTGATTGTTTATGCAAGCTAGGTTT TTTATTTTCTTCTTATTCTTTGGTTTATGTGCAGATAAGGTCTGTGATGCTGTAGAAGTAGCTGGAAGGAATGTCATGTC TACTTCATCAGTTGTTACCACCGGACTAGTTTCACATAAGTAAGTTTGTTCTCCCTAAATTCAGTCTTGTATGAATTATT CTCTTCACCAACATGATTTTCCTGGTTTCAATGATCGAAGAACCTTCCTTGAAATCATAATTTTATCAGACCAATCCCTT TTTATTTATGTGGTTCATTTAGTTCATAGTTTGGTGGATTACGTAACTTGTTTGATTTTAACATTAGACAAAGTCATTTC AAAAAAAAAAAAACATTAGACAAAGCCATAACTTATTTTCATTTGAGCTTGCATGTAATTAACCAATGCAAGAAGTCTCT TGAGTCGTCTTGATGTATTATATTGACTTGCCTTTTGTTTTTTTGGTGATATCAGATATGGAGAAGAAGCTGCTCAGGTT ACAAATGAAGGCCTTGATGCTGCAGGGCATGCAATTGGAACAGCTTGGACTGTGTTCAAACTTAGGAAAGCACTCAACCC AAAGAGTGTGATCAAACCAACAACACTAGCTAAAGCTGCTGCCCGAGCAAGCTCTGCTGAACTGAAGGCTAAGAAATAAC TAGTGATGGCAACATTAGAATGAGGATGTTCCCAATCCCATACATATGTATATTTGTTGTATTGGTTTAATAGTTTGTTT GTTATTTTAATTAATTTTGATCAAGATTAGTGTATGTAGTAAATGGTAGATGTTTATGAAAAGAAGTTGCCTTTGTTACA TTCTTTCAACTTGTCTACTGGTTTCATTGTATTCCATGTCCATTGCTCACAGGATGCTTAATGGGGTTCTGAGTTAGTAT ACAGGAAAGTGATTTGTAGACATCGGCAGAGTGCAGATAGGGTGTGAGAAGAGAAGAGAAAAGAGAGAAGTAGTGGATGA GATATATCGTATATAATAGTTGTGATAAGAGTCTACACTGTTATATGTTTACTACAAAGTATAAGGGGTAGAAGTAGTGA AGTAGAATTGTCATCTAACAGGCATAGAAATCATTCTTTCTGAAGTTCAAAGTTCAAAGTCTTACAGGAACCAACCTATT ATTTGTCAATCTTTTCCCTTAATAACTAGTTTTAAAAGGCTTGAAAGTCTTGAGATCCAAAACAACACCAGCCACAGAGC CAACAGCAGCTAACAATGAAATGATGAGGCAACTGACACTAAGCATCTGAAGTCCAAGCCACCGATTACTCCATCTTCCA ATCTTCTTTTGTGAGATGTACATGTCTATTGGGAAATAAACTGTTAAGGGCCAGAACCCAAAAGCTCCAAGTATTCCAAC AATGTCATTGAAAAAAGGCAATAGCATGGCCATGATGGTAGTCAACATCACAAAGATGGTCCTCCATACTAAGCGGAAGA AGTTGAGTTTGTACACCCCAAAGTAGGGAATGGGAATTTCATATTCTGCGGTGACTATACCATCCTTTGGCCACTTACGT GCAATCCACTTTTCAACAAATGCAAATAAGGGCTGGGAAAAAACCTGGAACAATATAAATCCAGTTCATAAGTAACTATA TTAGTACATTACTTTAGCACACTCCAAGTGGGAAAGTAACACATAGCACCATGATAATGTTCAAAAGTTCATGGAAACTT GAATTAAGACACTAACATTAAGAGGGTGTTCGGTACACGGGGGAACTTTAAAATCAATTCAGATAGAGTAGAATCAATTC TGTATGACAATTAGATGTTTGTGAATTGTGCGTCATTTAGGATAACTGATTTAAACCCTAAAATCAATTATCCTAGAAGA TCGAAGAGTATAATATTCTATTTCTGAGATTTTACAACTGAATTCAACAACATTACCCCTGCAAAAACCACTTTTTCTTA CAAATGCATCCAAATATAAATCATTTAATTTTAACCCATGCCTACTATACACAATATTGTTAGAATCAATTCTGCTAATG CTTAACCAAACAAACACTAGGTCCTAATATAGCACTATGTAATTGCCTGGTTTCTAGTTAGTTCATTTTTAGTTATAAAT TACAATAGTCTGAAGGTTTCTCTTTTCTTGAAATACTATTATATGTAATTCTAGGAGATGCAATGCATGAGACAAGGAAG ATCACAGCAAGTCTGTATTCAATTCTCTTTTGTTTAACTTTAAATTTTTAGTCTATTGCTTCCAGTTCAAATGATTTTAA GCTCTCCACAATTCTTGTGCAAATTTCTGAATTTCATGACAGATTACTAGTGCTCACAAATGATAAGATGTAGTACCTGG TATGCCCCAACTAGGTGCACAACAATTGCAAGGTTGGCAATGTCCAGAAGCCAATAGGGGTTATAGAACCCAAAACCAGT CAAAAGATTTCCAGGTGCAAGATCTCCAAAGGCTGCATAACCCATGCATCCACAGAGTAAATAGAAAACTGTGGTAACTG TTATGCTCAACCTACTTGCCCTTTTCATTGTCTTATACTCAGCAGGAGGAGACCTTAGAGTGTCCTGGGGAAAAATGCTT CATCATGTAAAATTGTGTTTCATGTGAAGAATCAATATGTATGAATGTATGATCCTCATGGACCCTATTTGAATTACCTG AATTTCAATGAGGATAATGGAAAAAGAGTATGCAAAGGCCATTGCCCCCAGAGCTTGAAAAGTCCTCCATATTTTCTCTG TGCTAGTGACTGTTCCAGCTTGTGTAACTGTACCAATGCTAATTCCCATCAAGCTTCCTTTAAAACTTTTATTTTCTGC
CDS sequence (LotjaGi3g1v0521700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCTTCCTCATCAATCTCTCTACCCACAAGTTCACTCCACTAACCCAGACGCAAACTCCCCTTTCTCTCACGCTTC AACCTCCTCTTCAATGTATCCCTCAGTCGGCAATCCCACCACGGCGCAGCAGCCATCGGAGCATGTTCTCGTCACCGTCC CCGGCGTGATTCTGCATCTCATAGAAAAAGACTCCAGCGTCCACCTCGCTTCCGGCGACCTCAACATAATAAGCCTCATG GAAGGGGACAGAGTCGTCACTGTTTTGGCCTCCGTTGGTGATCAAGTTCAGTGGCCGTTAGCTAAGGACGTTTCAGCGGT GAAGCTTGATGACTCTCACTATTTCTTCACGATTAGAGTTCCAAAGGAGGGTGGAGAGTTTGAAGTGCTGAACTATGGTG TCACCGTGGCAGCGGAAGGGAGAGGAAGAGGGAAGGAACTCGATGAGGTTCTGGAGAAGTACTGTTTTCTGTCGGTGGAG AAGGTGGAGGGTTTGGGAAATTGGGCGGTGTTGAAATCAGAGGAGAAGGGAGTGGCGGTGGAGGAGAAATCGGCGGCGTA TTGGACCACGTTGGCTCCAAACGTGGAGGATTACAGCAGCCGTTTCGCGAGGTGGATAGCTTCTGGGTCGGGTCAGATGG TGAGGGGGATTCTCTGGTGTGGGGATGTTACTGTGGATAGGTTGAAATGGGGGAATGATTTCTTGAAGAAGAGGTTGCAG CCTGGTGAAAAGAACTCACAAATCAGTCCCCAAGCCATGGAGAGAATGAAAAGGGTTAAGAATTTGACTAAGATGTCAGA GAAAGTGGCCCTTGGAATTCTCTCAGGGGTTGTGAAGGTGTCTGGATTCTTCACTAGTTCAGTAGTCAACTCTAAACCGG GAAAGAAATTCTTCAGCCTTCTTCCCGGAGAAATTGTTCTTGCTTCCATGGATGGATTCAATAAGGTCTGTGATGCTGTA GAAGTAGCTGGAAGGAATGTCATGTCTACTTCATCAGTTGTTACCACCGGACTAGTTTCACATAAATATGGAGAAGAAGC TGCTCAGGTTACAAATGAAGGCCTTGATGCTGCAGGGCATGCAATTGGAACAGCTTGGACTGTGTTCAAACTTAGGAAAG CACTCAACCCAAAGAGTGTGATCAAACCAACAACACTAGCTAAAGCTGCTGCCCGAGCAAGCTCTGCTGAACTGAAGGCT AAGAAATAA
Protein sequence (LotjaGi3g1v0521700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLPHQSLYPQVHSTNPDANSPFSHASTSSSMYPSVGNPTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLM EGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGKELDEVLEKYCFLSVE KVEGLGNWAVLKSEEKGVAVEEKSAAYWTTLAPNVEDYSSRFARWIASGSGQMVRGILWCGDVTVDRLKWGNDFLKKRLQ PGEKNSQISPQAMERMKRVKNLTKMSEKVALGILSGVVKVSGFFTSSVVNSKPGKKFFSLLPGEIVLASMDGFNKVCDAV EVAGRNVMSTSSVVTTGLVSHKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKSVIKPTTLAKAAARASSAELKA KK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 45 | 45 | - | – | |
| PANTHER | 5 | 402 | 398 | 1.9E-199 | – | |
| PANTHER | 5 | 402 | 398 | 1.9E-199 | – | |
| Pfam | 206 | 374 | 169 | 4.0E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0521700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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