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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009686
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.597s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0855220.1
n.a. Senescence/dehydration-associated protein-related isoform 1 [Theobroma cacao] gi|508783399|gb|EOY30655.1| chr2 13146189 13149450 +
2 domain predictions
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Lj2g3v1691070.1
n.a. ERD7 protein [Medicago truncatula] gi|357483827|ref|XP_003612200.1| chr2 26089617 26094878 -
2 domain predictions
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Lj3g3v3527570.1
n.a. senescence-related protein [Camellia sinensis] gi|198400319|gb|ACH87168.1| chr3 43163177 43163881 -
2 domain predictions
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LotjaGi2g1v0224500.1
n.a. Senescence/dehydration-associated-like protein; TAIR: AT4G15450.1 Senescence/dehydration-associated protein-like protein; Swiss-Prot: sp|F4JNX2|SDEH4_ARATH Senescence/dehydration-associated protein At4g35985, chloroplastic; TrEMBL-Plants: tr|A0A151T2Z2|A0A151T2Z2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0224500 LjG1.1_chr2 68072925 68076098 -
2 domain predictions
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LotjaGi2g1v0380100.1
n.a. Senescence/dehydration-associated-like protein; TAIR: AT2G17840.1 Senescence/dehydration-associated protein-like protein; Swiss-Prot: sp|O48832|ERD7_ARATH Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic; TrEMBL-Plants: tr|A0A151THU6|A0A151THU6_CAJCA Spartin; Found in the gene: LotjaGi2g1v0380100 LjG1.1_chr2 87676770 87680989 -
2 domain predictions
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LotjaGi3g1v0521700.1
n.a. Senescence/dehydration-associated-like protein; TAIR: AT2G17840.1 Senescence/dehydration-associated protein-like protein; Swiss-Prot: sp|O48832|ERD7_ARATH Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic; TrEMBL-Plants: tr|A0A072UN80|A0A072UN80_MEDTR Senescence/dehydration-associated-like protein; Found in the gene: LotjaGi3g1v0521700 LjG1.1_chr3 93835170 93839648 -
2 domain predictions
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LotjaGi4g1v0129700.1
n.a. Senescence/dehydration-associated-like protein; TAIR: AT2G17840.1 Senescence/dehydration-associated protein-like protein; Swiss-Prot: sp|O48832|ERD7_ARATH Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic; TrEMBL-Plants: tr|A0A1J7FZW4|A0A1J7FZW4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0129700 LjG1.1_chr4 18977519 18982493 +
2 domain predictions
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