Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0522100 |
| Transcript ID | LotjaGi3g1v0522100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nodulin-like / Major Facilitator Superfamily protein; TAIR: AT4G34950.1 Major facilitator superfamily protein; Swiss-Prot: sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4; TrEMBL-Plants: tr|A0A072UN92|A0A072UN92_MEDTR Nodulin-like/MFS transporter; Found in the gene: LotjaGi3g1v0522100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93888690..93893750) extracted from Lotus japonicus Gifu genome v1.2.
GTGTATATTAATTATTAAGTATAAATAAAACATTAATCTTTATTAAGCAAACATTAGCCTCCAGCAGGCATCAAGTGGAG GAGATGCTGTTTCATCTTACCAAACACACCACCAACTAGTCGTCAAAAATATCTGCTACATTTCGGAATATCCAAACAGG TACTACGGACTCTCTTTCTCTTTATTTCTTTTGAATTCAACTATTTATCACTAATCATATTTTTTTATTTTTCTTAATAA TGTAGGTGAATAAATTGAGGTGTGAATAAATTTTTTATTTTTTCAAAAAATCAACGGTTCGCGTTCATTTGCCGACTACA GTGATAGCAGTCATCTTGAACCTGAAGGGACAAACAAAACAAAATGCGTGTAAGGCGTGTTAGATAAAATACTATAAATA CATTGCATGTTTCCGCAAAATTGAAATAAATTCTGGTAGCTAATTTAGCTGATTCAATTTAATCAATGGGCGCCACTGAG TTCTCCGTCTCCACCGCCGGCAAATGGCTCGGCCTCGTCTCCGCCATCTGGATCCAATCCATCTCCGGCAACAACTACAC CTTCTCCAACTACTCCCACGCCCTCAAATCCCTCATGCACCTCACCCAGCTCCAGCTCAACAACCTCTCCGTCGCTAAAG ACGTCGGTAAAGCCTTCGGTCTCCTCGCCGGCCTCTCCTCCGACTTCCTCCCCACTTGGGCCATCCTCCTCATCGGCTCC GTCGAAGGCCTCATCGGTTACGGCGTCCAGTGGCTCGTCGTTGGCCAATTCATCAACCCTCTCCCCTACTGGCAGGTCAG TAATTCCTATTTAGTAATTATATTTAGAGATTTTGTTAATTGTGCAGTGCATCCATAAATGCAAATTGATTCGATTCGGG TTTAGCACCCGTTGTGCTAAGGTCGAATGCAATTTTTTGGCTTATAAAAAAAAACTAATTACCGGTTAAATGCAATTCTT TGGCTTATAAAAAAAACTAATTACTACATTTCCGATTCCGCCGCCGCAATACTTAAATTTCTCAAGTATTGCGGCGGTGG TTGCGGTTGCGGTTGCGTGTAGCATTTGAAAACCCCATTTCTTGTGATAATGGTGACTTTGTTTTGTGTAGATGTGTGTG TTTCTTTGTTTGGGAGGCAATAGCACAACATGGATGAACACTGCGGTGTTGGTTACCTCCATACGCAACTTCCGCCGAAA CAGAGGACCAGTTTCCGGGATTCTGAAGGGGTTTGTAGGGTTGAGCACTGCTATATTCACCAACCTCTGTTCCGCTCTGT TCGCCGACGATCCTGCTTCTTTTCTCCTTATGCTCGCTCTGATTCCGTTCGCCGTTTGCATCGCCGGCGTGTTTTTCCTC CGGGAGGTTCCTCCGGCGAAGACTGTAACAGCCGAGGACGACAGCGAGGAGGCTAGCTACTTCGGCGTTTGTAACGCTGT TGCCGTCGTTGTCGCCGTTTACCTCCTGGCCTACGGTTTTGTCCCCAGTCCTAGCTCCTTGGTGTCGCGAGTGTTCGTGG CGGTTTTGCTGGTTCTGTTGGCTTCGCCGGTGGGGATTCCGGTCTACTCTTACTTCAAAGGAAGGAAATCGAAATCGAAC CGGGATGTTGAGGGGCAGCGGGTGACCGAACCGTTGCTGATTCAGAGTGACGACAAGGAGAACGGGGCGGTGACGGTGGC GGCGGAAGAGGAAGTGGTGGTGGTGAAGGGGCGGCCGGCGGTGGGGGAGGAGCACACGATATGGGAGGCGATGAGGAGTG TGGATTTTTGGATCTTGTTCACGTCGTTTCTATGCGGCGTGGGAACCGGGTTGGCCGTGATGAACAATATGGGTCAAATC GGGTTGGCTCTCGGGTACACCGACGTGTCACTCTTTGTCTCATTGACCAGCATTTGGGGATTTTTTGGACGGATCATATC GGGTTCGGTTTCGGAGCTCTTCATCAAGTAAGTCCATGTTTATCAACACACACATGACACATACATGTTCTTTTCACACG TTTTCCAAGATTTGCACAGTAAGATAATGAATTGAATATGAATAATTAAATACTCTTTCATGCAATTGAAAGCAATTAAA TATTGTTCTAACTTCTTACTAGTAACTAGTCTCTCTTTTGTGAAAAAACTCATTGTTCAGTCTCGTCTCATATTACTTAG TGCCCTGATAGTTTTTCGGCTATTCTCCTGGGATATCTTTGTTTAATATAAGAAACTCATCCAGTTAAATTTTCATCTCA AATATTATCAAAATTAGTTATTGTTAGCTTGATTTCTAGAGTCACCATTTCTTTTACCTAAATTACCAGATCTACTAACC TTTTCTTCATACATGTCCTTTATTGTTGTACCAGATGTAGTTCATCTTTGGAAGGGATGTCTATGGAAACTAGTTTCCAT GATGATACTTTAGTTTTGTTCCTTGTGGGATTTTTTATAAAAATAATAATATAATACTAATTTTTGAATTAATTAGAAAG AGTAATAAAAGTTCAAAAAACTTGAAACAAACAATTTATACTTTTATGTGAATCTAATGATTTCAATAGAATTAACTTGA TCATAAACAAATCAGTGTAGTTATGATTAGTTGAAATATTGTTGAATAAATTAAAGCAATTCAATAAAGTCCATGATATG AAATGTCTTTAATTTATGACCAACCAAATGAGATATCTTCCTCCTTTGGATAGGTTGTTCATACTTCATAAGTCATAATC ATTTTGACACCAATGATGGAACAGCTTCTAATGCTTACTTTGGATATTCCTGGAATTAACTGTGATTTTTGCCATGTCAA CATCATAATACTTTCGGTGCAAGTTAAAAAAAAGTTAGGAACATATAGTCCATTTGACTTTATTCGAGCTTGATTATTCA ATTGTACTCAGATTTGAATTGTCATGTACACGTATGTTTTGGATTATGTACTTCAAAGTCAGTTCAGTTCTATTTCGCCA AGGGAAACAGGGTTGAATGCAAGCTCTTGATATGGAAATATATAAAATTACTGTTGGATTGTCCTGTGTTTTAGGTGATC CTTTGTAACAAGACAAGAATGATGTTCTCATAGAAGTTCTGACTACTAGTGTTTGATCATCAAGTTTCAACTGTCTGTGT TTCTTCTTTTTAACAATTTTTCCTATTAACAGGAAAGCTGCAACGCCTAGACCTCTTTGGAATGCAGCATCACAGATTCT GATGGCTGTGGGTTACATACTCCTAGCCATGGCTTTGCCGGGTTCACTTTACATTGGCTCTATCGTAGTCGGCATATGTT ACGGGGTGCGGCTAGCTATTACCGTCCCAACGGCCTCCGAGTTATTTGGACTCAAATATTATGGTCTCATCTACAACATT CTCATCCTCAACCTTCCATTGGGTTCTTTCCTCTTTTCCGGGCTGCTTGCTGGCATACTGTATGATAGGGAGGCAACTGC AACAGAAGGAGGAGGCAACACATGTGTTGGAGGTCATTGCTACAGGTTAGTCTTTATAGTAATGGCTGCAGCATGCATTG TTGGGTTCTTCTTGGACATTCTATTGTCAATCAGAACCAAGAATGTCTACAACAAGATTTCCATGAGCAAGAAATCCAAG AAATCTTTGGGGACATCAAGTAGCCAATGATCCAGGATGGGGCATACAGAACGGTACAACAAATCCTGGGATTGATGAGT TTTTTTTGCTTAGTGATATCCCAGTTTCCCACTAAGAAGATAGACATCCTATTAAATAGTTCACTATTTTTTTTCAAAAA AAAAAAAAAAAAGTAAAGGAGGGTTGTTGTGACTGTGTTAAATTCAATTCTAAACTGTAAGCATTCCACTAGATTCTTAT TTTTCATGATATGTTTCATTGATTATTCAGATAGAATTCTTTTGGTTCAATTTGGAGAGGACAACAGTCAATTTTGTTGT TTCTCCGTGAACTGATGGGGTGTATCATTTTTCTCTTATTGTCAAGTCAGTATTATTTGGAAATAAGCTTTACTTACTAG TCTCAAGTTCCAAACTTTCAGACCACTGAATTGCCAAATTGCAAACATTCCATTCAATATTTCAATTGGTTCATAATAGC ATAATTTTCTGCAAGGATCAATATGTACATGAGAGTAATTTTATTAACTTGTCATAGAATTACATGTCAAACAATGTCCT TCTCTTGAATTTGTATCAGTTTCATACCATTGTTTTTCCATGAGTTTGTCCATTGTTATACAGCTGCAAAGCCTCTGATG TGGCAGTTAACAGAGTGATATGACAGAAATCATGGAAGGGCAGTGAAGATAACTACCATTTGCCTTTTCATATATAGAAA CTTTAGTATTTTGCTTCTTTAATGAATCATAATAATGTTTTAAATCGTAATACAAATGTAAGAATGAGCTCCATTGGTTG ACAGACCCCATATAATCTGAGTTGAGTAACTCAAACAAAATCTGAAACATAAAGCAGAAAGCTACAATTCAAATGCAAAT TTCTTAAACATCTCAAATTCTCAATTCTGAGTATGTGATGCATTTTCTGATGGGTTTGAATGACCAATTCACTCACATTG GATCCTCTGCCATCAATTACATTATTATTTTACTCTCAGTGGTTCAAGATGAAAAACAATGCAAAATTGCTCTTATGGCA ACTCCATCTGAGTCAACAACAATTTTTAATGTTCAAGGTTCCAATACTCACAGATCACGGACAAGAGTTCAACAGCATTT TACAATGCTCTGATACCATGTTAAACAGAGAAAAACTGAAGAAAGAAGTTAAGTTTATTGATGAATCAATTAAAGTATTT GTACACAGTGAGAGAGTCTAAATTAAATAACATACTCACAAATAACTGATAACTAACTCTCTAACAAGAAAACTATCTCT TGCAAAATAACTGAATTTACTAACAGCTAACTGATCTATTAACTAAAGTGACAGTTCTAGAATAGGACTCAATTCCTACT CATTATCAACACCAAAAAGGATGTCATTTAGCAAATGACTTCACTTTATGTGAGAACTGGTTTCAACTGACTTGGGAGAA AAATCTAAGACTTACTGCTAG
CDS sequence (LotjaGi3g1v0522100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCGCCACTGAGTTCTCCGTCTCCACCGCCGGCAAATGGCTCGGCCTCGTCTCCGCCATCTGGATCCAATCCATCTC CGGCAACAACTACACCTTCTCCAACTACTCCCACGCCCTCAAATCCCTCATGCACCTCACCCAGCTCCAGCTCAACAACC TCTCCGTCGCTAAAGACGTCGGTAAAGCCTTCGGTCTCCTCGCCGGCCTCTCCTCCGACTTCCTCCCCACTTGGGCCATC CTCCTCATCGGCTCCGTCGAAGGCCTCATCGGTTACGGCGTCCAGTGGCTCGTCGTTGGCCAATTCATCAACCCTCTCCC CTACTGGCAGATGTGTGTGTTTCTTTGTTTGGGAGGCAATAGCACAACATGGATGAACACTGCGGTGTTGGTTACCTCCA TACGCAACTTCCGCCGAAACAGAGGACCAGTTTCCGGGATTCTGAAGGGGTTTGTAGGGTTGAGCACTGCTATATTCACC AACCTCTGTTCCGCTCTGTTCGCCGACGATCCTGCTTCTTTTCTCCTTATGCTCGCTCTGATTCCGTTCGCCGTTTGCAT CGCCGGCGTGTTTTTCCTCCGGGAGGTTCCTCCGGCGAAGACTGTAACAGCCGAGGACGACAGCGAGGAGGCTAGCTACT TCGGCGTTTGTAACGCTGTTGCCGTCGTTGTCGCCGTTTACCTCCTGGCCTACGGTTTTGTCCCCAGTCCTAGCTCCTTG GTGTCGCGAGTGTTCGTGGCGGTTTTGCTGGTTCTGTTGGCTTCGCCGGTGGGGATTCCGGTCTACTCTTACTTCAAAGG AAGGAAATCGAAATCGAACCGGGATGTTGAGGGGCAGCGGGTGACCGAACCGTTGCTGATTCAGAGTGACGACAAGGAGA ACGGGGCGGTGACGGTGGCGGCGGAAGAGGAAGTGGTGGTGGTGAAGGGGCGGCCGGCGGTGGGGGAGGAGCACACGATA TGGGAGGCGATGAGGAGTGTGGATTTTTGGATCTTGTTCACGTCGTTTCTATGCGGCGTGGGAACCGGGTTGGCCGTGAT GAACAATATGGGTCAAATCGGGTTGGCTCTCGGGTACACCGACGTGTCACTCTTTGTCTCATTGACCAGCATTTGGGGAT TTTTTGGACGGATCATATCGGGTTCGGTTTCGGAGCTCTTCATCAAGAAAGCTGCAACGCCTAGACCTCTTTGGAATGCA GCATCACAGATTCTGATGGCTGTGGGTTACATACTCCTAGCCATGGCTTTGCCGGGTTCACTTTACATTGGCTCTATCGT AGTCGGCATATGTTACGGGGTGCGGCTAGCTATTACCGTCCCAACGGCCTCCGAGTTATTTGGACTCAAATATTATGGTC TCATCTACAACATTCTCATCCTCAACCTTCCATTGGGTTCTTTCCTCTTTTCCGGGCTGCTTGCTGGCATACTGTATGAT AGGGAGGCAACTGCAACAGAAGGAGGAGGCAACACATGTGTTGGAGGTCATTGCTACAGGTTAGTCTTTATAGTAATGGC TGCAGCATGCATTGTTGGGTTCTTCTTGGACATTCTATTGTCAATCAGAACCAAGAATGTCTACAACAAGATTTCCATGA GCAAGAAATCCAAGAAATCTTTGGGGACATCAAGTAGCCAATGA
Protein sequence (LotjaGi3g1v0522100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGATEFSVSTAGKWLGLVSAIWIQSISGNNYTFSNYSHALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLSSDFLPTWAI LLIGSVEGLIGYGVQWLVVGQFINPLPYWQMCVFLCLGGNSTTWMNTAVLVTSIRNFRRNRGPVSGILKGFVGLSTAIFT NLCSALFADDPASFLLMLALIPFAVCIAGVFFLREVPPAKTVTAEDDSEEASYFGVCNAVAVVVAVYLLAYGFVPSPSSL VSRVFVAVLLVLLASPVGIPVYSYFKGRKSKSNRDVEGQRVTEPLLIQSDDKENGAVTVAAEEEVVVVKGRPAVGEEHTI WEAMRSVDFWILFTSFLCGVGTGLAVMNNMGQIGLALGYTDVSLFVSLTSIWGFFGRIISGSVSELFIKKAATPRPLWNA ASQILMAVGYILLAMALPGSLYIGSIVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYD REATATEGGGNTCVGGHCYRLVFIVMAAACIVGFFLDILLSIRTKNVYNKISMSKKSKKSLGTSSSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 73 | 73 | - | – | |
| PANTHER | 6 | 543 | 538 | 2.2E-260 | – | |
| PANTHER | 6 | 543 | 538 | 2.2E-260 | – | |
| CDD | 12 | 513 | 502 | 1.2907E-129 | – | |
| Pfam | 13 | 261 | 249 | 3.4E-90 | ||
| Gene3D | 13 | 274 | 262 | 3.6E-7 | – | |
| SUPERFAMILY | 38 | 527 | 490 | 1.7E-24 | ||
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 74 | 96 | 23 | - | – | |
| Phobius | 97 | 107 | 11 | - | – | |
| Phobius | 108 | 134 | 27 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Phobius | 135 | 145 | 11 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 146 | 168 | 23 | - | – | |
| Phobius | 169 | 173 | 5 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 174 | 193 | 20 | - | – | |
| Phobius | 194 | 212 | 19 | - | – | |
| TMHMM | 211 | 233 | 23 | - | – | |
| Phobius | 213 | 234 | 22 | - | – | |
| Phobius | 235 | 239 | 5 | - | – | |
| Phobius | 240 | 265 | 26 | - | – | |
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 266 | 328 | 63 | - | – | |
| Gene3D | 317 | 530 | 214 | 2.2E-11 | – | |
| Phobius | 329 | 347 | 19 | - | – | |
| TMHMM | 329 | 348 | 20 | - | – | |
| Phobius | 348 | 352 | 5 | - | – | |
| TMHMM | 353 | 375 | 23 | - | – | |
| Phobius | 353 | 375 | 23 | - | – | |
| Phobius | 376 | 395 | 20 | - | – | |
| TMHMM | 396 | 418 | 23 | - | – | |
| Phobius | 396 | 415 | 20 | - | – | |
| Phobius | 416 | 420 | 5 | - | – | |
| Phobius | 421 | 442 | 22 | - | – | |
| TMHMM | 422 | 444 | 23 | - | – | |
| Phobius | 443 | 453 | 11 | - | – | |
| Phobius | 454 | 479 | 26 | - | – | |
| TMHMM | 457 | 479 | 23 | - | – | |
| Phobius | 480 | 498 | 19 | - | – | |
| TMHMM | 499 | 521 | 23 | - | – | |
| Phobius | 499 | 520 | 22 | - | – | |
| Phobius | 521 | 547 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0522100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…