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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0524300 |
| Transcript ID | LotjaGi3g1v0524300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT2G21120.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6; TrEMBL-Plants: tr|I1LPM9|I1LPM9_SOYBN Probable magnesium transporter; Found in the gene: LotjaGi3g1v0524300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94120996..94125934) extracted from Lotus japonicus Gifu genome v1.2.
GCATTTAACAAGCAGATCTGAAAGCGGATTTGTCGCCAGAGACAACTACATCCCCGCTGTATAACGGCGGAAACTTCTGA CATGGCAAGTACTTCCTACTATTTATTTCATTTTGTCAATAATCACATTCACAAGAAGCAAAAAAGTGAATTATAAAAGT GCTTTTGCTTTTGCTGCTGCTAATAGCGACTACTCTTCTCTTTCTCTCTTCATCTATCAGATTCAATCACTTGAATTTCT CTTCCGAAGAACAAGTTGCAATCTGTTGTTTTGGCGGGAAATCCAACCGCAGCAACGACGTCGTAGTCATCCATGGGGGT TTCGGAGAACAGCAAGGGGTTGGTACTGGCGGTGGGTTCAAGTGCATTCATCGGCGCAAGCTTCATCTTGAAGAAGAAGG GTCTTAAGCGTGCTGCTTCCCATGGAACCCGTGCAGGTCCTCCATTTTCATCAATTCAATCAACAATCATCAATTCTAGA TCGGATTTGTAATTATTGCTTGTGATTTGAGTTCTTTGTTTCTTTGAAATTTTGCAGGAGTTGGTGGTTACACTTATCTA CTTGAACCACTTTGGTGGGCTGGCATGGTAACAAGTAAGTTTTACAAAGCTGCTTTGGTTTGATTTTGAAATGAAACTCA CATGGATCTTGAACTGTTTGGTTTCTTACACTGTTTTCAGTGATTATTGGGGAGATTGCAAATTTTGTTGCTTATATCTA TGCTCCAGCAGTTCTGGTTACTCCCCTTGGTGCACTTAGTATTATTGTCAGGTAATATTGATTTAGTATATATTTGGTTT CGCAATTTGCACAGAATACGGACATGTTTAGTCAGAAGCTAAGACTTGTAACTTTTAACTAGAAGTGATTTTAAAGCATT TTCCGGTGGAACTAAACATGAATTGAATGTAGAAGGTTGCTTTTAGATAGGAACTAATGTGTCCGGCATGTGTTGCCAGT GCTGTTTTGGCTCACTTCTTGTTGAAGGAACGGCTTCAGCAGATGGGGGTGGTGGGGTGTGTATCTTGCATTGTGGGATC GATTGTTATTGTCATCCATGCGCCGCAAGAGCATACTCCAAACTCTGTCCTAGAAGTATGGAATCTGGCCACTGAACCAG GTTGAATTCTATTTCCTGTTTTATGTTACTCTTGAATTTAATTAATTCGTATCCAGTCTGGTAATTGTTGTTCTTGATCC TTTCTTTGCAACAGCATTCGTGGTTTATGCAGTAGCAACAGTTTCAGCAGTTTTGGCCTTGATTTTACACTTTGAACCTC GTTACGGACAGACTAATATGCTCGTCTACTTGGGAATTTGCTCATTAATGGGCTCACTCACGGTAATGAAGTTTGTACCA ATCATGTAGATGGCAGTTTCAAGGTTTCATATTAATATTGTAATGAAATGAACTGTGTACTTAGTCTGTTCATCATTGAT TTTTTTTTACATTATTCAGGTTGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGGATAAGTCAAG CAGCTTATCCTCAGACTTGGTTTTTTGTTTCCGTGGCCACAATATGTGTCCTTACACAATTGAATTACCTTAACAAGGTG AGTGCAGAGTTATGAATTCAGCTGGTGCAACTTATGACTGAAATTATAAGCTGTTGTTTATTAATGTGCTGAAGGCAAAA CAATTTCCAGTTTAGCCTTGGACTTGATGGATGATCTATGATTTCTTATTTCTAGTATGGTTCCATAAGGCAAAGCGTCT TTTCTTTTTATTTAATAAGAGGAAAACTGATCAAAACGCAGTAATTGGTGTTCCTTTTAATAAAAAGAGCAAAAGAGCAG AGCTATTTAAAATGCTATCTATTTACAGGACTGATCCAATTTAAACATGATCCAAAAAACATAGAACTGTAAAAGGCTAT CTTGTGAACAACGCTTTGTTTGGTTCAATCATATTTAGTATTGAGTGTTTCCATCTAAATACGTTATACTTGATCCAAAG TTTCACCCTTTGATACGAAGTTGCAAACTAATGAACAGAATTAGTTGTAATAATGTTTTCCCAACTGATCTTTGTCTTTG AGTTCCCACTGACATTAATTTTCTTGTCATTGCTCTATGGTATATCTTTGACTCCCTTATTCTATTGACAACTCTTGAAC TAATTTTTTTTTTTTTTTTACCATGTATCAGGCTCTGGATACATTTAATGCAGCAATTGTTTCTCCTGTATATTATGTAA TGTTCACAACTCTCACTATTATTGCCAGTGTAATAATGTTCAAGGTATGGTTATAGATTCGTATTTTTTGGATTCATTCA GTGATGTATCAAACTTTTCATTTTATTGGAAACTAGGATATGACAAGCTTGGCTATTTGCTTTTATTGATTTCCCATGCA GGATTGGTCAGGTCAGGATGCCAGCAGCATAGCCTCTGAAATATGTGGATTCATCACTGTTCTTTCAGGAACAATCATAC TGCATGGGACTAGAGAAAAGGAAGAACGTAATATGCAAGGTACAGAGTAAAATGTTACTTCCAATCAGATGCCTTCTATG CTAATGCATTTTAGACTGTCTCACAACCTGCAGTGACAATTAAATCTGATGAAGTGATGGTATGATATCTTATTTATTTG ATGCAGGGAACTTGACATGGTATATTGGTGAGGATTCAACGAAGTGCATTGAGGATGAACACATGATCTTTATACGTGAT TCGGATTATGAACGTGTTTCTTTTCGAGGTTGATGTAAGAGAGCATGTTCTATCAACAATACTATGAATTGAGCCTGCCC TGGGTCCATGATCTGGTGCATTTGCTGTTTGGATTGCATGTCTTAGATCCTGGAGAGCTTAAATTCAAGCATCCCATGGT GCTATAGTTTCTGACCATTTCTCCACAGGCCGTGTTGCACATGTGGCTGTTCGATGGAGCCATCTGAAAACTCGTGTGAT ACGCTAAACGTGGTTCAAGTGCTGGATCGTTTGAAACTGAAATAGGATTGCTGTGTCTCATTGCAACCATTGAGATTTTT GGAGCGATCTCATGGCCTGTTCTACTGTCCATGGGGGTCAATGTGATTTTACTTTTTCAATTTCTGCAGAAAGTGAGTAA TTGTCTATATTGTCTGGTAAGTATTTTCTCATCTAAATTAGATTTGTATAGTTTCTTTTTGCGAATTTGGTAAATGATGT TGATTGTATTTTGTCGGCTTCTGCTAAAATTATTGGAAATATTTTTCTTCTCATCTTCTGCAACAAATGCTTGCCTAATT TGATGGATGTGGTTTTGTTATCTACTTTTTATCATGATTTCTTTGTTAAGATTCGAGCATTAGCTAATAAAGATCCAAAT GGAAATGATAGTTGACAACACTATGTGTGCACAGTTCAGTTTGTTCGCACCAAAGCATATGTTGTTGGCGAGTCTAAGGT GCTTTTGTATGGCATCTTTGAATCTTTGTTGTTCTATCTTACTGAATGTGATTTATAGATAAGTCTTTAAATTGTTGCTT CGATTCAAAGCAAACACTCTCATGCACTGATAATGATCATAGGTATATATGCCTTTTCTGATGAACTATAGTGTATTTGA CTTTTCATTGAATTCAAAGCTAATTTGCGTTGAAGTCACGTCACAAAATCTTATGTCTTCTTTTGCGTATTGGGAAACCA ATCAGACATTCATCTCTATCACTTGCGTCCATACCTTTCTGTTCCTAAAATTTTAGTCAGGTACTCAACGACGTTTGAGC ATTAGATAAAGTGGAAAGAAAAATTAAGGCGTAAATAAACCCAATATGGATAAATATGCTTTGGTCATTACAATACCTAT TCCTCTCTTGTGATCTTGAAATTAAAGTCCTATACAGATTAAGATCGACATCGACTTAACAGGGACAAATTAACCAGGCG TTTGGAAAAATGTCAATATTATGTAAGTAAGTTACACATAAGTTAAGTTTGAAAAGTAGGTTGGATTCATGCCCAGCTTG ACCAATTTCTAGCTCTAATGGTAGAACCAGTTTTTAGCGTTACAGAATATCACCTATCACAATTTATTTGACAGTTTTAC TCATTTTTCAGTTGAATTTTTAAAAATAGGAATAACTTACCAAGTATACATTATGAAAGTATTGAAAAAAATTCTCCAAT TATGATTAAGGTTAGTTCATGAGTTATAGATAGCTTAGGTGGTGAATTTGTGGGATATGCATTGTAATGACAATGAGAAG GGTTCGAACTCAAAAAAAAAAAACTTTTCAAAATTGAGAGTTAACTCTAATTTTGTAGTAAGAGTACTGGGTGCTTAGTA CAACGAGAGTATCCAAAATTCTCAAACTGCATTCCCGCTGCGGCGCTGCAGTTTAATCCAATTGTGAGAAAATAAACCAT TACATTTATATTGTTAATTTGATTATAAAACATGTAATATTCTGTGGCTAAGATCTGTTGAAGTTAAAAGTTAAACTGCA CATGATCCAAATCCATCCTCAGATACCTCCTCAGTCCTCTCTCTTTTCTGTACCAAAAAAGACACCTCCTCTTTCCCTCC TCCACCCACTCATTTTGGAGTTTTGGCTATGATTTTCTATACTGTCAAATAACATACACTTTTATATTTTCTTTATTCTC TTATTGTGTGTGTGTGGTGAGCCTTAAGCATAAGAATGAGAATGATATTCTCCTACATTGTGATTATCTAAATTGAACTT TAAAAAAAAAAAAGATTATCTAAATTGAAATACTTTCAAATATTAATTTCTAATCCTTTATTTTTAAATATCAAATTCAA AATATTTTTCAACTTTTTCTTGTAATTCTACTAATTTTAAAATAAATTCAAATTCTCATCCTATAGTGTCAACTTGTTTG AACACCACCCAAAAACTACTAGCGGTCGTAGTGCATGTTTGAGTTTCTCACCAAGCTGG
CDS sequence (LotjaGi3g1v0524300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAACAATGATTATTGGGGAGATTGCAAATTTTGTTGCTTATATCTATGCTCCAGCAGTTCTGGTTACTCCCCTTGG TGCACTTAGTATTATTGTCAGTGCTGTTTTGGCTCACTTCTTGTTGAAGGAACGGCTTCAGCAGATGGGGGTGGTGGGGT GTGTATCTTGCATTGTGGGATCGATTGTTATTGTCATCCATGCGCCGCAAGAGCATACTCCAAACTCTGTCCTAGAAGTA TGGAATCTGGCCACTGAACCAGCATTCGTGGTTTATGCAGTAGCAACAGTTTCAGCAGTTTTGGCCTTGATTTTACACTT TGAACCTCGTTACGGACAGACTAATATGCTCGTCTACTTGGGAATTTGCTCATTAATGGGCTCACTCACGGTTGTGAGCA TAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGGATAAGTCAAGCAGCTTATCCTCAGACTTGGTTTTTTGTT TCCGTGGCCACAATATGTGTCCTTACACAATTGAATTACCTTAACAAGGCTCTGGATACATTTAATGCAGCAATTGTTTC TCCTGTATATTATGTAATGTTCACAACTCTCACTATTATTGCCAGTGTAATAATGTTCAAGGATTGGTCAGGTCAGGATG CCAGCAGCATAGCCTCTGAAATATGTGGATTCATCACTGTTCTTTCAGGAACAATCATACTGCATGGGACTAGAGAAAAG GAAGAACGTAATATGCAAGGGAACTTGACATGGTATATTGGTGAGGATTCAACGAAGTGCATTGAGGATGAACACATGAT CTTTATACGTGATTCGGATTATGAACGTGTTTCTTTTCGAGGTTGA
Protein sequence (LotjaGi3g1v0524300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTMIIGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKERLQQMGVVGCVSCIVGSIVIVIHAPQEHTPNSVLEV WNLATEPAFVVYAVATVSAVLALILHFEPRYGQTNMLVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQAAYPQTWFFV SVATICVLTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASVIMFKDWSGQDASSIASEICGFITVLSGTIILHGTREK EERNMQGNLTWYIGEDSTKCIEDEHMIFIRDSDYERVSFRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 239 | 239 | 1.1E-108 | ||
| PANTHER | 1 | 268 | 268 | 1.3E-155 | ||
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 268 | 268 | 1.3E-155 | – | |
| SUPERFAMILY | 3 | 67 | 65 | 1.7E-8 | – | |
| Phobius | 12 | 42 | 31 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 48 | 6 | - | – | |
| TMHMM | 49 | 68 | 20 | - | – | |
| Phobius | 49 | 68 | 20 | - | – | |
| Phobius | 69 | 87 | 19 | - | – | |
| TMHMM | 88 | 107 | 20 | - | – | |
| Phobius | 88 | 105 | 18 | - | – | |
| Phobius | 106 | 116 | 11 | - | – | |
| Phobius | 117 | 141 | 25 | - | – | |
| TMHMM | 119 | 141 | 23 | - | – | |
| Phobius | 142 | 155 | 14 | - | – | |
| Phobius | 156 | 174 | 19 | - | – | |
| TMHMM | 156 | 175 | 20 | - | – | |
| Phobius | 175 | 180 | 6 | - | – | |
| Phobius | 181 | 205 | 25 | - | – | |
| TMHMM | 182 | 204 | 23 | - | – | |
| Phobius | 206 | 216 | 11 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 217 | 236 | 20 | - | – | |
| Phobius | 237 | 281 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0524300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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