Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0524300 |
| Transcript ID | LotjaGi3g1v0524300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT2G21120.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6; TrEMBL-Plants: tr|A0A151TMS4|A0A151TMS4_CAJCA Probable magnesium transporter; Found in the gene: LotjaGi3g1v0524300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94120996..94125934) extracted from Lotus japonicus Gifu genome v1.2.
GCATTTAACAAGCAGATCTGAAAGCGGATTTGTCGCCAGAGACAACTACATCCCCGCTGTATAACGGCGGAAACTTCTGA CATGGCAAGTACTTCCTACTATTTATTTCATTTTGTCAATAATCACATTCACAAGAAGCAAAAAAGTGAATTATAAAAGT GCTTTTGCTTTTGCTGCTGCTAATAGCGACTACTCTTCTCTTTCTCTCTTCATCTATCAGATTCAATCACTTGAATTTCT CTTCCGAAGAACAAGTTGCAATCTGTTGTTTTGGCGGGAAATCCAACCGCAGCAACGACGTCGTAGTCATCCATGGGGGT TTCGGAGAACAGCAAGGGGTTGGTACTGGCGGTGGGTTCAAGTGCATTCATCGGCGCAAGCTTCATCTTGAAGAAGAAGG GTCTTAAGCGTGCTGCTTCCCATGGAACCCGTGCAGGTCCTCCATTTTCATCAATTCAATCAACAATCATCAATTCTAGA TCGGATTTGTAATTATTGCTTGTGATTTGAGTTCTTTGTTTCTTTGAAATTTTGCAGGAGTTGGTGGTTACACTTATCTA CTTGAACCACTTTGGTGGGCTGGCATGGTAACAAGTAAGTTTTACAAAGCTGCTTTGGTTTGATTTTGAAATGAAACTCA CATGGATCTTGAACTGTTTGGTTTCTTACACTGTTTTCAGTGATTATTGGGGAGATTGCAAATTTTGTTGCTTATATCTA TGCTCCAGCAGTTCTGGTTACTCCCCTTGGTGCACTTAGTATTATTGTCAGGTAATATTGATTTAGTATATATTTGGTTT CGCAATTTGCACAGAATACGGACATGTTTAGTCAGAAGCTAAGACTTGTAACTTTTAACTAGAAGTGATTTTAAAGCATT TTCCGGTGGAACTAAACATGAATTGAATGTAGAAGGTTGCTTTTAGATAGGAACTAATGTGTCCGGCATGTGTTGCCAGT GCTGTTTTGGCTCACTTCTTGTTGAAGGAACGGCTTCAGCAGATGGGGGTGGTGGGGTGTGTATCTTGCATTGTGGGATC GATTGTTATTGTCATCCATGCGCCGCAAGAGCATACTCCAAACTCTGTCCTAGAAGTATGGAATCTGGCCACTGAACCAG GTTGAATTCTATTTCCTGTTTTATGTTACTCTTGAATTTAATTAATTCGTATCCAGTCTGGTAATTGTTGTTCTTGATCC TTTCTTTGCAACAGCATTCGTGGTTTATGCAGTAGCAACAGTTTCAGCAGTTTTGGCCTTGATTTTACACTTTGAACCTC GTTACGGACAGACTAATATGCTCGTCTACTTGGGAATTTGCTCATTAATGGGCTCACTCACGGTAATGAAGTTTGTACCA ATCATGTAGATGGCAGTTTCAAGGTTTCATATTAATATTGTAATGAAATGAACTGTGTACTTAGTCTGTTCATCATTGAT TTTTTTTTACATTATTCAGGTTGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGGATAAGTCAAG CAGCTTATCCTCAGACTTGGTTTTTTGTTTCCGTGGCCACAATATGTGTCCTTACACAATTGAATTACCTTAACAAGGTG AGTGCAGAGTTATGAATTCAGCTGGTGCAACTTATGACTGAAATTATAAGCTGTTGTTTATTAATGTGCTGAAGGCAAAA CAATTTCCAGTTTAGCCTTGGACTTGATGGATGATCTATGATTTCTTATTTCTAGTATGGTTCCATAAGGCAAAGCGTCT TTTCTTTTTATTTAATAAGAGGAAAACTGATCAAAACGCAGTAATTGGTGTTCCTTTTAATAAAAAGAGCAAAAGAGCAG AGCTATTTAAAATGCTATCTATTTACAGGACTGATCCAATTTAAACATGATCCAAAAAACATAGAACTGTAAAAGGCTAT CTTGTGAACAACGCTTTGTTTGGTTCAATCATATTTAGTATTGAGTGTTTCCATCTAAATACGTTATACTTGATCCAAAG TTTCACCCTTTGATACGAAGTTGCAAACTAATGAACAGAATTAGTTGTAATAATGTTTTCCCAACTGATCTTTGTCTTTG AGTTCCCACTGACATTAATTTTCTTGTCATTGCTCTATGGTATATCTTTGACTCCCTTATTCTATTGACAACTCTTGAAC TAATTTTTTTTTTTTTTTTACCATGTATCAGGCTCTGGATACATTTAATGCAGCAATTGTTTCTCCTGTATATTATGTAA TGTTCACAACTCTCACTATTATTGCCAGTGTAATAATGTTCAAGGTATGGTTATAGATTCGTATTTTTTGGATTCATTCA GTGATGTATCAAACTTTTCATTTTATTGGAAACTAGGATATGACAAGCTTGGCTATTTGCTTTTATTGATTTCCCATGCA GGATTGGTCAGGTCAGGATGCCAGCAGCATAGCCTCTGAAATATGTGGATTCATCACTGTTCTTTCAGGAACAATCATAC TGCATGGGACTAGAGAAAAGGAAGAACGTAATATGCAAGGTACAGAGTAAAATGTTACTTCCAATCAGATGCCTTCTATG CTAATGCATTTTAGACTGTCTCACAACCTGCAGTGACAATTAAATCTGATGAAGTGATGGTATGATATCTTATTTATTTG ATGCAGGGAACTTGACATGGTATATTGGTGAGGATTCAACGAAGTGCATTGAGGATGAACACATGATCTTTATACGTGAT TCGGATTATGAACGTGTTTCTTTTCGAGGTTGATGTAAGAGAGCATGTTCTATCAACAATACTATGAATTGAGCCTGCCC TGGGTCCATGATCTGGTGCATTTGCTGTTTGGATTGCATGTCTTAGATCCTGGAGAGCTTAAATTCAAGCATCCCATGGT GCTATAGTTTCTGACCATTTCTCCACAGGCCGTGTTGCACATGTGGCTGTTCGATGGAGCCATCTGAAAACTCGTGTGAT ACGCTAAACGTGGTTCAAGTGCTGGATCGTTTGAAACTGAAATAGGATTGCTGTGTCTCATTGCAACCATTGAGATTTTT GGAGCGATCTCATGGCCTGTTCTACTGTCCATGGGGGTCAATGTGATTTTACTTTTTCAATTTCTGCAGAAAGTGAGTAA TTGTCTATATTGTCTGGTAAGTATTTTCTCATCTAAATTAGATTTGTATAGTTTCTTTTTGCGAATTTGGTAAATGATGT TGATTGTATTTTGTCGGCTTCTGCTAAAATTATTGGAAATATTTTTCTTCTCATCTTCTGCAACAAATGCTTGCCTAATT TGATGGATGTGGTTTTGTTATCTACTTTTTATCATGATTTCTTTGTTAAGATTCGAGCATTAGCTAATAAAGATCCAAAT GGAAATGATAGTTGACAACACTATGTGTGCACAGTTCAGTTTGTTCGCACCAAAGCATATGTTGTTGGCGAGTCTAAGGT GCTTTTGTATGGCATCTTTGAATCTTTGTTGTTCTATCTTACTGAATGTGATTTATAGATAAGTCTTTAAATTGTTGCTT CGATTCAAAGCAAACACTCTCATGCACTGATAATGATCATAGGTATATATGCCTTTTCTGATGAACTATAGTGTATTTGA CTTTTCATTGAATTCAAAGCTAATTTGCGTTGAAGTCACGTCACAAAATCTTATGTCTTCTTTTGCGTATTGGGAAACCA ATCAGACATTCATCTCTATCACTTGCGTCCATACCTTTCTGTTCCTAAAATTTTAGTCAGGTACTCAACGACGTTTGAGC ATTAGATAAAGTGGAAAGAAAAATTAAGGCGTAAATAAACCCAATATGGATAAATATGCTTTGGTCATTACAATACCTAT TCCTCTCTTGTGATCTTGAAATTAAAGTCCTATACAGATTAAGATCGACATCGACTTAACAGGGACAAATTAACCAGGCG TTTGGAAAAATGTCAATATTATGTAAGTAAGTTACACATAAGTTAAGTTTGAAAAGTAGGTTGGATTCATGCCCAGCTTG ACCAATTTCTAGCTCTAATGGTAGAACCAGTTTTTAGCGTTACAGAATATCACCTATCACAATTTATTTGACAGTTTTAC TCATTTTTCAGTTGAATTTTTAAAAATAGGAATAACTTACCAAGTATACATTATGAAAGTATTGAAAAAAATTCTCCAAT TATGATTAAGGTTAGTTCATGAGTTATAGATAGCTTAGGTGGTGAATTTGTGGGATATGCATTGTAATGACAATGAGAAG GGTTCGAACTCAAAAAAAAAAAACTTTTCAAAATTGAGAGTTAACTCTAATTTTGTAGTAAGAGTACTGGGTGCTTAGTA CAACGAGAGTATCCAAAATTCTCAAACTGCATTCCCGCTGCGGCGCTGCAGTTTAATCCAATTGTGAGAAAATAAACCAT TACATTTATATTGTTAATTTGATTATAAAACATGTAATATTCTGTGGCTAAGATCTGTTGAAGTTAAAAGTTAAACTGCA CATGATCCAAATCCATCCTCAGATACCTCCTCAGTCCTCTCTCTTTTCTGTACCAAAAAAGACACCTCCTCTTTCCCTCC TCCACCCACTCATTTTGGAGTTTTGGCTATGATTTTCTATACTGTCAAATAACATACACTTTTATATTTTCTTTATTCTC TTATTGTGTGTGTGTGGTGAGCCTTAAGCATAAGAATGAGAATGATATTCTCCTACATTGTGATTATCTAAATTGAACTT TAAAAAAAAAAAAGATTATCTAAATTGAAATACTTTCAAATATTAATTTCTAATCCTTTATTTTTAAATATCAAATTCAA AATATTTTTCAACTTTTTCTTGTAATTCTACTAATTTTAAAATAAATTCAAATTCTCATCCTATAGTGTCAACTTGTTTG AACACCACCCAAAAACTACTAGCGGTCGTAGTGCATGTTTGAGTTTCTCACCAAGCTGG
CDS sequence (LotjaGi3g1v0524300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGTTTCGGAGAACAGCAAGGGGTTGGTACTGGCGGTGGGTTCAAGTGCATTCATCGGCGCAAGCTTCATCTTGAA GAAGAAGGGTCTTAAGCGTGCTGCTTCCCATGGAACCCGTGCAGGAGTTGGTGGTTACACTTATCTACTTGAACCACTTT GGTGGGCTGGCATGGTAACAATGATTATTGGGGAGATTGCAAATTTTGTTGCTTATATCTATGCTCCAGCAGTTCTGGTT ACTCCCCTTGGTGCACTTAGTATTATTGTCAGTGCTGTTTTGGCTCACTTCTTGTTGAAGGAACGGCTTCAGCAGATGGG GGTGGTGGGGTGTGTATCTTGCATTGTGGGATCGATTGTTATTGTCATCCATGCGCCGCAAGAGCATACTCCAAACTCTG TCCTAGAAGTATGGAATCTGGCCACTGAACCAGCATTCGTGGTTTATGCAGTAGCAACAGTTTCAGCAGTTTTGGCCTTG ATTTTACACTTTGAACCTCGTTACGGACAGACTAATATGCTCGTCTACTTGGGAATTTGCTCATTAATGGGCTCACTCAC GGTTGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGGATAAGTCAAGCAGCTTATCCTCAGACTT GGTTTTTTGTTTCCGTGGCCACAATATGTGTCCTTACACAATTGAATTACCTTAACAAGGCTCTGGATACATTTAATGCA GCAATTGTTTCTCCTGTATATTATGTAATGTTCACAACTCTCACTATTATTGCCAGTGTAATAATGTTCAAGGATTGGTC AGGTCAGGATGCCAGCAGCATAGCCTCTGAAATATGTGGATTCATCACTGTTCTTTCAGGAACAATCATACTGCATGGGA CTAGAGAAAAGGAAGAACGTAATATGCAAGGGAACTTGACATGGTATATTGGTGAGGATTCAACGAAGTGCATTGAGGAT GAACACATGATCTTTATACGTGATTCGGATTATGAACGTGTTTCTTTTCGAGGTTGA
Protein sequence (LotjaGi3g1v0524300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVSENSKGLVLAVGSSAFIGASFILKKKGLKRAASHGTRAGVGGYTYLLEPLWWAGMVTMIIGEIANFVAYIYAPAVLV TPLGALSIIVSAVLAHFLLKERLQQMGVVGCVSCIVGSIVIVIHAPQEHTPNSVLEVWNLATEPAFVVYAVATVSAVLAL ILHFEPRYGQTNMLVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQAAYPQTWFFVSVATICVLTQLNYLNKALDTFNA AIVSPVYYVMFTTLTIIASVIMFKDWSGQDASSIASEICGFITVLSGTIILHGTREKEERNMQGNLTWYIGEDSTKCIED EHMIFIRDSDYERVSFRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 3 | 325 | 323 | 3.3E-192 | – | |
| PANTHER | 3 | 325 | 323 | 3.3E-192 | ||
| Phobius | 6 | 26 | 21 | - | – | |
| Pfam | 6 | 296 | 291 | 1.3E-135 | ||
| TMHMM | 10 | 27 | 18 | - | – | |
| Phobius | 27 | 52 | 26 | - | – | |
| TMHMM | 40 | 62 | 23 | - | – | |
| SUPERFAMILY | 52 | 124 | 73 | 1.83E-8 | – | |
| Phobius | 53 | 74 | 22 | - | – | |
| Phobius | 75 | 79 | 5 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 80 | 99 | 20 | - | – | |
| Phobius | 100 | 105 | 6 | - | – | |
| Phobius | 106 | 125 | 20 | - | – | |
| TMHMM | 106 | 125 | 20 | - | – | |
| Phobius | 126 | 144 | 19 | - | – | |
| TMHMM | 145 | 164 | 20 | - | – | |
| Phobius | 145 | 162 | 18 | - | – | |
| Phobius | 163 | 173 | 11 | - | – | |
| Phobius | 174 | 198 | 25 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 199 | 212 | 14 | - | – | |
| Phobius | 213 | 231 | 19 | - | – | |
| TMHMM | 213 | 232 | 20 | - | – | |
| Phobius | 232 | 237 | 6 | - | – | |
| Phobius | 238 | 262 | 25 | - | – | |
| TMHMM | 239 | 261 | 23 | - | – | |
| Phobius | 263 | 273 | 11 | - | – | |
| TMHMM | 271 | 293 | 23 | - | – | |
| Phobius | 274 | 293 | 20 | - | – | |
| Phobius | 294 | 338 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0524300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…