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LotjaGi3g1v0526000.1

Overview

Field Value
Gene ID LotjaGi3g1v0526000
Transcript ID LotjaGi3g1v0526000.1
Lotus japonicus genome version Gifu v1.2
Description Calcium-dependent lipid-binding domain protein; TAIR: AT3G19830.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|Q9BSJ8|ESYT1_HUMAN Extended synaptotagmin-1; TrEMBL-Plants: tr|A0A1J7HYK5|A0A1J7HYK5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0526000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:94263995..94271402) extracted from Lotus japonicus Gifu genome v1.2.

CTCCTCAGAAAACCCTCAGAAATGGGATGTCGATCATGAATGAAACTCCAGCTCCATATTTTGTTGATTATCCACGTAGT CGTGATTCTGAGGCCATAAATCTAGCTTCCAATTCCGTTCAACGCTTTTCCTCTCTCCCTTTCATGCACTTTTCTTCACT TCCATTTCCATAACCATTCTTCTCCAACACCCAAACCTGGAACGAACAACCATCATAATTCATCACCATTATTATTCATG TTCCAATTCAATAATGCTATTGCAACAATCTTCCACTGTGCATCATCTCACTCTAGATGATTCTTCAACAATCTTCTTCC ACCTTCCACTTCCAATTCTCTCACATTTTCTGCCCCTGCAACAACACCACCATCACTCATGAAGTAGTGAACGCTTTCGC CGCATTCCCAATCTCCAGAAGGAGAAGAAACCGCTTCATTTCAATTTCAAATTCTGGGTATCGCAGCAAATTCCGAAGAA AACCAACCCTCACCTTCTGTGCCCTTTCCAACCGGAATTTGAACGCCGAATTCGCGAGAAGGGTCGTTCTGAACCGGATT CCCAATGAATTTGAAGGTGAACGCGGTGATGATACCAGCGAGGAGTTGCAGGAATCGCCAGTTCAATTGGGTTCCAATTT CACTACTAGATTCCAAGAAGACCCGCTTGTGGATAAGCTCAGAACTCAATTGGGGGTGATTCACCCGATTCCATCGCCTC CGATTAACCGCAACGTGGTTGGTTTGTTTGTGTTCTTTTTCTTTGTTGGGGTTGTGTTTGATAAGCTCTGGACTTCAAGG AGGAACAAGGTTAACAGTGAGGATAGTTTGCGTGGTGTGTGGCCTCAGGTGCCTACTAGCTTCTCTTTGTTTTTGGAGAA GGATTTGCAGAGGAAGGAGTCTGTGGAATGGGTCAACATGGTGCTGGGGAAGCTCTGGAAGGTTTATAGAGGTGGGCTTG AGAATTGGATCATTGGGTTGCTTCAGCCTGTTATTGATGACTTGAAGAAGCCTGATTATGTGGAGAGGGTTGAGATTAAG CAATTCTCATTGGGGGATGAACCCTTGTCTGTTAGGAATGTCGAGCGCAGGACTTCTCGCCGGGTGAATGATTTGCAGTA TGTTTTTGTTGTCATGTGATTTGTTGTGTGCTTTGGTTGGTAATAGCTCAAGTTAAATTATATGTTGGCTATCAAATATT GAAATTGATCTTTTAGCTTATTATGTTTCTATTGAATTTGAATTGCTGTTTCGGTAACGTTTTTAGTCACCATATCTTAT GTAGTGTGGACAAGTTTGGACTTAAGTTACTTGTGAGTGTTTTAAGGTTTTTGTTACCATATTCTTAATATAACCAATTA ATTTCTCTTTGTTTTATCTATTCTAGGTACCAGATAGGCCTTAGGTATACTGGTGGTGCTCGTATGCTGTTAATGCTTTC TCTGAAATTTGGCATTATTCCAATTGTTGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGAGAACTTTGGGTGAAAT TACGACTAATACCAACAGCACCTTGGGTTGGAGCTGCTTCATGGGCTTTTGTTTCCCTTCCAAAGATCAAGTTTGAACTG TCTCCATTCCGTTTATTTAATCTAATGGGTATGTATGTCATAATTTTCTTAATCTAACTAGTTATATCCTTAATCTTTAC TTGGATTCAAATGCTTCTGCGAGCAATTCAACTAAAAACGCATTTTTTGGGAACTTTGATTGCACAAACAAAATGTCGTG TGAATATGGACCAAACCTCCTTGACACAAACTGATAATCTGCTCTGTAGTAAAAGCCGCTAGCTTACACAAAAACAAGTG ATTATCATCTTACTTCTTAGAACTGTTAGATAAAGAATAGCATTATTGTAATAGTGTATTAATTTTGTACCAATTCTCGA GGTATCTTTTGACAATGGCCTCACAAATGATTGTTGGTGATGAAGAGAGTTTTATATTGGTTAGTATGGTTATTTTAAAT TCTTATAAATACTTGTTTGATTAGGGAAGCCTTAGCAATCAATTTAACTAATAAATCCTGGATCCTCCATTTTCACAACT AACTTACAGTGTGTTAAGAACCGTATAATCCAAAAACTTCAGATGTTAGGTGAAGGGTCTAGAATGGCTTTATCTCTTGC AAGAGTCCTTTAGTTTGCATGCGCCTATCTACCTTGTGCTGATTTTTTTTTTTACAATAATGATAGCAAAAGGATCAAAC TCTTGATTAATTGATTCTAGCGCTCTTATACCGCGTGAAGAACCAGCACTCCTAAAAGCTTAATGTATTATGTTTACTCA TCAATTGTTTTATATCTAATATAGTGTGATTTCCCCGCTAAAATTTCAATTTTCGTATAACGTCGTGAAGTTCCTTCTAC TGTTTCAGATATGTCAAAGGCAACATATTATCTCCTTGAATATCAACTACATATTTTTTTAAAAAATATCTAATATATTG TTGCTGACATCTATTTTATTTTCTTCTTATATTGTTGCTGACATCTATGTTCTTTTTTTTTCTTTTGTGCATCGTTGGGC ATGACCAGCAATTCCAGTACTCTCGATGTAAGTTCCATGTATCTTTTTACTGCTATGAGTTCATTTCTACTATGCTTTTG AAGCTGTATGAGTACATTTATTTTAATCCATTTTAAAAGTGATATATGGAGTATCAGGCATGCATCTGATGGTGATGTTA CTAATGACATCAATTAAATGTGCTTCAGAAGCCTTAAGCTCTCCTGATTAAAAGTTTTTAGTTATTAGTAAATGGTTTCA CATTTTTTAAGTATGATCCCTCTCCTTGGTATCTCTTTATTAATATTTTTTCCCAAAAGAACAATGCCAATGAGGTTATT TCATTAAAACATTCAATGCCTTCTGAAATAAATATATTCCAAGTTCTCTTCATCTTTATGGATTTATTATCCAAAGATTG TTTGTGAATTTTTTCTTTTCTTTTAATATCACTACTTACTAGTTTTGATGCAATTATTCTGGCTTTTCTCTGTAGGTTTT TGACCAAACTTCTCACAGTAGACTTGCCTAAACTATTTGTGCGGCCAAATAAAATTGTTTTGGATTTCCAGAAGGGAAAA GCTGTTGGTCCTGTTCCTAATATTATTAAATCTGGAGAAATGCCTGAAGGAAGCAAGGATTGTGTCGGTGAACTATCTGT TACTCTTGTTGATGCTCGAAAGCTTCCTTATCTCTTCTATGGTATAACTCTATTTCTTGTATTTCTTTTTTAATAAATTG TATCGGTGAACTGTCTGTTTGTCCTTTTTATATGATGAGTGATGAATCTTCTCTATAGGAGAGGTGGAGGAAACGAAAAA AGGGGGAAATTGTGGTATAGTTGCCTGCTTAAAACAGATGCCACCTAAAGTAGTTTGTTCTCATCCTAGGAGATGCAAAA GGACAAAGGGCAAATCTGGTGCTAAAAAGTTTCCACTGTGGACGAGGTCCAGGGAGGGGGCGAACCCACTTTGTGGATCT AATGTAAGCAGTCTTACCTTGCATCATAGAAGATGCTAGGTCCGGAAAGGGGCTCGCCCTCCTTCATAGAAGATGCAAAA TAGAAATATTAATAATAATGCAAGACAGCCTTACCTTGCATTATTGCAAGAGGCTGATTCCACGAATCGAACATGTGACC GCAAAGTCACATGACGATAACCTCACCGTTGCGCTAAGGCTCACTCTCTTTCATCATAGAAGATGCAAAATAGAAATATC AATAATAATGAAGTAAATTTTGAAGTGAAATGTTACCTCGGTGCTCGTGTTTGTAGATCTGTAAATCATACATAATTTAG GCCTTCCTGAATCTTAGTTTTTATTTTAAATTGGCAAATGAGGAAAGTCAATGACCTTTCCAGCATGACATTGTTTGTCA ATGACATTTGTGATGAGATTTTTAAAATAAATGTAGCATTTCACTGGGTTTAGACTTTTCTTCATTCATATGTAGTAATT AGTATCCTTTGGTACTTTTAGTACTTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCCCCCCCCTT TGTGCAGCATTCGGTAGACATCAAGTGTGTGTACTCCTTTTTCTCTTAGTTGTGTTTTCTTTTCATACCAGTTTCCGTTA CAACAAAATTTAGTTTTAAAATGGTGTGCAGTATATATGCTCTCTTATCCACCACAATTAATTTTTGTCTTGCTGTTCTT TCAGGCAAGACAGATCCTTATGTCATTCTTAGCCTTGGAGATCAAATTATACGCAGTAAAAAGAACAGTCAAACTACTGT CATTGGGCCCCCTGGAATGCCAATTTGGAATCAGGTATTGTTTTTGGATTTCATGATTTGTCTTTGTTTATGTTGTGTCT ATATTTTTCATTGAGCTCATGTGTTCTTGCTCTACAGGATTTTCATATGCTTGTTAGCAACCCTAGAAAGCAGAAGTTGA GTATCCAAGTAAAGGACGCACTGGGATTTGCAGACTTGACTATTGGTACGGGAGAGGTATGAAGTATCCAATGCCAAAAT TATTTTAGTGGCGCTTTATTTCGCAAATTTTCTACTTAGTTTTAAACTTCTTTCACAGTGTACTGTGCGTATATGTGGTT CACTTTTTTAAGGGGGTCTGGCTTTGCTACCTAGCTTCTGTTATACCTTTCTGTCAATAACGCTGATTGTTAACATTCAA ATATTAGTAATGTCTTTTTGTTGTCGCCTTCTCTAATATTTTTTCATTACCAGTCATGTTTCAAGTATGTTGTCCAAGTC ATCTTGATGCACCTGGAGTACTTGTCTTGAACAAAGATGTGCTTACCGGATTTTCCCGTTCTTTCTTCTCTTGTATTAAC TTGCTTTTGATTGACTGGCTTTCTGGATGTTAATTATATTTCTGGTATGATGCTGGCTGTTAATCAGCAGCAGTTTTGTC ATTTGCTGGTGGAGTTTGATGTAGGCTGGTGTAGGTTGATTTTCATGTGTTGAATAGGGTTAAGCTGATTAGACCTCATG GGAATTTGTGATTTGGATTGTATGAGTGAGATTACCTATAGATGGGATTGGCGCTTTTTTTAATGGTTCAGCGGTTAAAT TTTTAATCTTATTGAAGGATTTTGTTTATGGTTTCCCTTTATAATATTTGCCGCTTGGACTGGCTTCTCCTTCAGCATGT ATACTGAATGTTTTGGCGTATGTCGGGAATGTGTGTATTTGGGATGGTTTTCTTCGAATTTTCTACTGTACTTCGTCACA GAAAGAATTGTAACCTCTCCAGTGGCATGTGCTTTCTTAGAAATGTCAGGCTCTGAAACTTTTTGTACTAGGAGAAAAAA GGGGCGGACTAGGACTATGAAGAAGGAGGCTATGAGATATGTTTACTAAACCTGGAATATAACAGAATTTACAGTTGACA GTTTGTGAACAGAGAGGTTCCTGGCAGGTAGAAAGTTGAATGCTTTTGGGGAGGGTATAGAGGGTCTTGGGAAGGGGAGG ATAGTAGAGCTAAAGTCGATGACCATTGGCTTGGGTGGAGATTGCTTGTTGTAGTCTCCGGGTATCTTTCTTTATTGTTA TCCTTTTGCTATTGAGCCTCTGATTTCCAGAGGATTTTCTCTGCTCCGAGGAGCAGAGTTCCCTTATTGTTGGATAGATA TTTTTGGTTCCAAATTAAAAAAACTTGAGTTGACAGAGAGAATAGACATGTGTCTGTCCTCCATCTTCAATGTTGCTCGG CTTTGTAGCCACCATATTTACTGTTGCTATTCATATAGTATAGTTCCCCAAAATACTACTCTTCTGACACAAAACACAGG AAATCTGAGTATTCTGAATGGTATCTGTTAACATATTTATTGTGATGTCAATAGATAAGTGGTTGCGAAGTAAATTTTAT CTTCCCAATCCCTTGAATCAAAGTTGGACATGTGTGCTACAATCTAATCTATTCTTTTCCCTAGTGTCATTTCTGTTGTT CCTTTAATGTTGTACCAATTTTGTGTCCATCATAATGTGTTAGTAGTTGAATAAAAATTGTAAGTATATGGATTTCATAG TTAATTTTGTATTTTTTCCTGTGTGTATGTTTCTTAATTGAAAATGTTTTCAGGTTGATTTGGGATCTCTTAAAGACACT GTACCAACAGATAGAATTGTAGTTTTACAAGGAGGTTGGGGTTTTTTAGGAAAGGGCTCCTCTGGGGAGATATTACTCCG GCTAACATATAAAGCATACGTGGAGGATGAGGAAGATGACAAGACTGAGTTGGATTCCATTGATCTTGATGTGTCAGATG ACGAGTTGTCTGATTCAGAAGAAGAAAGTCTCAGTAATAAGAAGGGTGTTAGGGACCCTACATACGAAGCAGACAAAGAA TCATTTATGGATGTTTTGGCAGCATTGATTGTTAGTGAAGAATTCCAAGGGATAGTAGCATCTGAAGCAGGGTTTACCAA AGCTGTGGATAATGGCTCAAATATAGGGTCCAAACTCTCCAACGTATCAAATTCTCCTGTTGTGAATGCTGAACCAATTC CTTCCAGTTCTGATAATTCCAAAGGTTCTGGAGGTACCATGTTTTTATAATCTCTATTTTCACCTAGTATATGTATTATC TGAAGGTTTATAAGATTTATGAAATCTCTAATGTTCATGATAACAATCAAAACTTTCAATTGCAGGGTCAGCCTTAATAT GGCTTGCTGTGATTACTGGCATAGCATTACTAATAGCTGTCAACATTGGGGGTTCAAATCTCTTCAATCCATAGCATGGT ATTCTGCTGCAAATAATCTTGGGCTGGCAGGTTTTGCTGTAGGTTTTAATCAGAATAATTTTTCTTTTATCCACTAGCAT AGTATTTGTATATCCATGACTACTGCTGATGGAGGAAAACATCTACCGGCGGCACATGATTTTTGGCTTTGTGATGTGAG AGCCCAAATTTTATTTCAGCTTAAAAATGCATTAATTGTTTATATGCAAATGCAAGGATATTGTTTTCTATCTGGCAATA ATATAATAGAAGAATAGAATTACAGGTGTTTCATTTCTCTTGTCTGGAAGTTTTTTCTTGTCACATTCCATTATATGATG AAGAATGGCAAAAAAATCTTTGTATTAGTTATTGATGCTGGTGTTTGGGGGATGAAAAAACCATGAATGGAAGGGGAAAA AAAGTGGCACTCGCATGAGAATTCTCTGCTCCAGTGGAGATAACAGATAAACATTGATATTACCACTCATATAAGCGACA TTGGATTCACGTGAGAAAATATTTCTTTCTCATGTTTTTGTGATGGCTCAAGAAATAGAAGAGAGAATAACCATGTGGGG AGCTGAGAGAAATATTATCCGTTTCTCTTTTATTTTGTGATGGCTTCA 

CDS sequence (LotjaGi3g1v0526000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATTCTTCAACAATCTTCTTCCACCTTCCACTTCCAATTCTCTCACATTTTCTGCCCCTGCAACAACACCACCATCAC TCATGAAGTAGTGAACGCTTTCGCCGCATTCCCAATCTCCAGAAGGAGAAGAAACCGCTTCATTTCAATTTCAAATTCTG GGTATCGCAGCAAATTCCGAAGAAAACCAACCCTCACCTTCTGTGCCCTTTCCAACCGGAATTTGAACGCCGAATTCGCG AGAAGGGTCGTTCTGAACCGGATTCCCAATGAATTTGAAGGTGAACGCGGTGATGATACCAGCGAGGAGTTGCAGGAATC GCCAGTTCAATTGGGTTCCAATTTCACTACTAGATTCCAAGAAGACCCGCTTGTGGATAAGCTCAGAACTCAATTGGGGG TGATTCACCCGATTCCATCGCCTCCGATTAACCGCAACGTGGTTGGTTTGTTTGTGTTCTTTTTCTTTGTTGGGGTTGTG TTTGATAAGCTCTGGACTTCAAGGAGGAACAAGGTTAACAGTGAGGATAGTTTGCGTGGTGTGTGGCCTCAGGTGCCTAC TAGCTTCTCTTTGTTTTTGGAGAAGGATTTGCAGAGGAAGGAGTCTGTGGAATGGGTCAACATGGTGCTGGGGAAGCTCT GGAAGGTTTATAGAGGTGGGCTTGAGAATTGGATCATTGGGTTGCTTCAGCCTGTTATTGATGACTTGAAGAAGCCTGAT TATGTGGAGAGGGTTGAGATTAAGCAATTCTCATTGGGGGATGAACCCTTGTCTGTTAGGAATGTCGAGCGCAGGACTTC TCGCCGGGTGAATGATTTGCAGTACCAGATAGGCCTTAGGTATACTGGTGGTGCTCGTATGCTGTTAATGCTTTCTCTGA AATTTGGCATTATTCCAATTGTTGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGAGAACTTTGGGTGAAATTACGA CTAATACCAACAGCACCTTGGGTTGGAGCTGCTTCATGGGCTTTTGTTTCCCTTCCAAAGATCAAGTTTGAACTGTCTCC ATTCCGTTTATTTAATCTAATGGCAATTCCAGTACTCTCGATGTTTTTGACCAAACTTCTCACAGTAGACTTGCCTAAAC TATTTGTGCGGCCAAATAAAATTGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTCCTAATATTATTAAATCT GGAGAAATGCCTGAAGGAAGCAAGGATTGTGTCGGTGAACTATCTGTTACTCTTGTTGATGCTCGAAAGCTTCCTTATCT CTTCTATGGCAAGACAGATCCTTATGTCATTCTTAGCCTTGGAGATCAAATTATACGCAGTAAAAAGAACAGTCAAACTA CTGTCATTGGGCCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTAGCAACCCTAGAAAGCAGAAGTTG AGTATCCAAGTAAAGGACGCACTGGGATTTGCAGACTTGACTATTGGTACGGGAGAGGTTGATTTGGGATCTCTTAAAGA CACTGTACCAACAGATAGAATTGTAGTTTTACAAGGAGGTTGGGGTTTTTTAGGAAAGGGCTCCTCTGGGGAGATATTAC TCCGGCTAACATATAAAGCATACGTGGAGGATGAGGAAGATGACAAGACTGAGTTGGATTCCATTGATCTTGATGTGTCA GATGACGAGTTGTCTGATTCAGAAGAAGAAAGTCTCAGTAATAAGAAGGGTGTTAGGGACCCTACATACGAAGCAGACAA AGAATCATTTATGGATGTTTTGGCAGCATTGATTGTTAGTGAAGAATTCCAAGGGATAGTAGCATCTGAAGCAGGGTTTA CCAAAGCTGTGGATAATGGCTCAAATATAGGGTCCAAACTCTCCAACGTATCAAATTCTCCTGTTGTGAATGCTGAACCA ATTCCTTCCAGTTCTGATAATTCCAAAGGTTCTGGAGGGTCAGCCTTAATATGGCTTGCTGTGATTACTGGCATAGCATT ACTAATAGCTGTCAACATTGGGGGTTCAAATCTCTTCAATCCATAG 

Protein sequence (LotjaGi3g1v0526000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MILQQSSSTFHFQFSHIFCPCNNTTITHEVVNAFAAFPISRRRRNRFISISNSGYRSKFRRKPTLTFCALSNRNLNAEFA RRVVLNRIPNEFEGERGDDTSEELQESPVQLGSNFTTRFQEDPLVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVV FDKLWTSRRNKVNSEDSLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWIIGLLQPVIDDLKKPD YVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLR LIPTAPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPKLFVRPNKIVLDFQKGKAVGPVPNIIKS GEMPEGSKDCVGELSVTLVDARKLPYLFYGKTDPYVILSLGDQIIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPRKQKL SIQVKDALGFADLTIGTGEVDLGSLKDTVPTDRIVVLQGGWGFLGKGSSGEILLRLTYKAYVEDEEDDKTELDSIDLDVS DDELSDSEEESLSNKKGVRDPTYEADKESFMDVLAALIVSEEFQGIVASEAGFTKAVDNGSNIGSKLSNVSNSPVVNAEP IPSSSDNSKGSGGSALIWLAVITGIALLIAVNIGGSNLFNP 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 146 146 -
PANTHER 16 681 666 0.0
TMHMM 142 161 20 -
Phobius 147 165 19 -
Phobius 166 286 121 -
ProSiteProfiles 199 386 188 16.539
TMHMM 284 306 23 -
Phobius 287 306 20 -
Phobius 307 320 14 -
Phobius 321 338 18 -
TMHMM 321 338 18 -
Phobius 339 349 11 -
TMHMM 350 372 23 -
Phobius 350 369 20 -
Phobius 370 654 285 -
Gene3D 409 554 146 2.9E-18
SUPERFAMILY 412 540 129 4.05E-20
Pfam 412 508 97 7.2E-12
SMART 413 514 102 1.1E-8
ProSiteProfiles 413 499 87 10.427
CDD 414 508 95 3.07351E-12
MobiDBLite 550 568 19 -
MobiDBLite 550 580 31 -
Phobius 655 679 25 -
TMHMM 657 679 23 -
Phobius 680 681 2 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Lipid binding Interacting selectively and non-covalently with a lipid.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0526000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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