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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0537300 |
| Transcript ID | LotjaGi3g1v0537300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfite reductase [NADPH] hemoprotein beta-component; TAIR: AT5G04590.1 sulfite reductase; Swiss-Prot: sp|Q75NZ0|SIR_PEA Sulfite reductase [ferredoxin], chloroplastic; TrEMBL-Plants: tr|A0A0B2P8I5|A0A0B2P8I5_GLYSO Sulfite reductase [ferredoxin]; Found in the gene: LotjaGi3g1v0537300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95402819..95408450) extracted from Lotus japonicus Gifu genome v1.2.
GAAATAATGGAGAGGAAGGGAGCGTGGCGGGCGTGCGCGTACGTCATTGCTCAAATCATACCAGCACTATAGAAAGAAAG AAAGAAAAAAGTTCCCGTGACATCGAAATAAAATAGAATAGATTCTTAAACAAAACCAAATTCGTCTTCGTCGCCACCAC TAGCCATCTATTCTATTCATACATATTCGCTACCACACCACACCACACCACTCACAACAGCATTCTCGCTTTTCACTCTC ACAACCCACACACCATAAAACCACCACAAAACTCTCTTCTTCCTCCGCTACTTCCATGACGACGTCGTTCGCAGCAGCAT CACCGGCTCTCAGAGACCCCAACCTCCACATCCCAACCTTCCATGGCCTCAGATCTGCTCTCACTCGCAATGCCCTCCCA TCCACGCGCTCCCTCTCGCTCATACGCGCCGTCTCCACGGTACCAATTTTATGCTCATTTCTTCAATGAATCATTTCACT GTTTTCTCTTAATTTTCCATTTTCGTTTCGTGCTCTCAAGTTGTTGTGTTTTCTTGCAATTTCTGTTCTCTGTAGCCTGA AACTGTGACTGAGAAGCGTAGCAAAGTCGAAATAATCAAAGAGCAAAGCAATTTCATAAGATACCCTCTCAACGAGGATT TGCTAACAGATGCTCCCAATTTGAGCGACTCAGCTGTACAGTTAATCAAGTTTCATGGCAGCTACCAGCAGTACAACAGA GATGAGCGTGGCTCCAGAACCTACTCCTTCATGATACGCACTAAAAACCCTTGTGGGAAGGTTCCCAATAGGCTTTACTT GACCATGGATGATCTCGCCGATCAATTTGGAATCGGGACGCTTCGATTGACTACCAGGCAGACGTTTCAGCTACATGGGG TTGTCAAGCAGGATCTCAAAACTGTTATGGCTAGCATTATCAGGAACATGGGGTCCAGTCTCGGTGCTTGTGGTGACCTT AACAGGAATGTGCTTGCTCCTGCGGCTCCCCTTGTGAGAAATGATTACCTCTTTGCTCAGCAGACCGCGGAGAATATTGC GGCGCTACTGGCTCCGCAGTCTGGTTTTTACTATGATATTTGGGTGGATGGGGAGAGGATTATGTCAGCAGAACCGCCTG AAGTTGTTCAGGCGCGAAATGATAATTCTCATGGTACAAATTTCCCTGATTCGCCTGAGCCCATTTATGGAACTCAGTTC TTGCCAAGGAAATTCAAAGTTGCAGTTACTGTGCCAACTGATAACTCGGTGGATATCCTCACGAATGATATTGGGGTTGT TGTTGTTACTGATGATGATGGGGAGCCTCAAGGGTTCAACATATATGTAAGATGTATTTAAGTAGTGGTTAAGTGGAAGA TTTTTTCAGCCTTTATTCTAACTGGGATCTTGTAATTATTCTTGCAGGTTGGGGGAGGAATGGGAAGAACACATAGGAAT GAAAGCACTTTTCCCCGGTTGGCTGAACCGCTGGGTTATGTACCGAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGT GGTTACACAGCGAGAAAATGGGAGAAGAGATGACCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCTTGGGGAATTG AAAAGTTCAGAACTGTAGTTGAGCAATACTATGGCAAGAAATTTGAACCTTTCCGCCGCTTGCCAGAATGGGAATTTAAA AGTTATCTTGGGTGGCATCAGCAGGTTGGTTCTTTAGATGAATGAATGCTATGAATGTCCAATGAATACTATCAATGTCT TTATGCCTGCTTGTAAACCTACCCCATATTATTGTTTGTTGATGCACATCTTTCATAGTTTATGCTTATTGTCAAATAAC CACTTAATCCCAAAAGCTTAAGCTGTTGGGTAAGGGCCACTTTAATGGTTTTATATTATATTCTAACACTTATTTCTGTG TAAAGGGGAAGTTGGTGGATAGGATTTTGGTATGTTTAATATCTATTTATGGATTAATAGCTGATATGAGGACAATTGTT CTTCATACATGCCATCTGAACTGCAAAAGTGTGCACTTGTTTTAGTTATTTTTGCCTGAGAAGTGATACTAGGGATAGCA TAGAAAACTAATTTTTTTTTGGAGATCAGGTAAATGAAGACTGTTTTCAATGTTCTTTAGATTTTAGTTACATCGTTTGG CTTTTGATATGCACATAAGTTTTTGCTATTTGACTGTGAGAGAACTAAAGCCATATCTCTTTTTTATGTGGCTAAGTAAT CTATAGTTAGCTCATTCTTTGATGATTTGTCTTTGTCTAAAATATAGAAATATAGTTTCATGCCCTTAAGTTACATGGGC TTATTTCTTGGATTTCATCTTCCAGGGTGATGGCAGTTTATTTTATGGGCTTCATGTTGATAATGGTCGTATTGCTGGGA AAATGAAGAAGGCATTGAGGGAGGTTATTGAGAAATATAATTTGAACGTTCGACTTACTCCAAATCAGAACATAATACTG ACTGACATTCGTGCTGTGTGGAAGCGTCCCATCACAACAATTCTCGCTCAAGCTGGTCTTTTGGTGAGATGTTCATATCT TAATGCTTACAGATTATATACCCTTACCCTAATTGTTCTTTGTTAAACTATATTTATTTATAAAGTATTTAATCCACCTG TCCCTGAACAGATGACACTTGACATTACTTGTTAACCCTACATATTTTCATTTATTTTCATTTAGAGGTCGCAATTCAGT AGTTTTACTGTGTTGGGTTTAGATGTTACAACAGAAATTATTCTTACAAGCCCTATATTATACAGACTATCATTACTTAG GGATAACAATTTGTAACTTTCAGGGTTTTATAGATCTGATTAGCTGCTGCTTTATAATGAACCTAATTTTTTATGGGTTT TACCGTGGAATTTCTTATGTTTTTCTCACTCACTTTGGATTGATGCTTGACATGTATAAGGAATTAGTGATCGAGACTTA CCATATTATATATTGGAACTTGGTTAATTTCTTCGCTACTTTTGCTTGACTTCATGCTCAATGTTAGTTTACTAGAACAT TTTTTTCTAACTATATTTCTTCATCTCTATTTTTTCCCACCGACCTTACATAGTGAGATAAGGCTTTTGTTGTTGCTGCT GTTGTATTTTTTTCCCTCTATTACTATTCTCCTCTTAATTTATTTCTGTTTTTTCGTGCAAAGTCTGTTTCTTTATTAAG CCTAAAATGACCCTATTTTGCTGTGAACAGCAACCTAGTCTTGTAGATCCCCTCAACAGGACGGCAATGGCCTGCCCTGC TTTCCCATTATGTCCATTGGCTATTACCGAAGCTGAACGTGGGATACCAGACATTCTTAAACGGGTTCGTGGTGTTTTTG AAAAGGTACTGCTGCAGATGAAAGTCTAGTACTGACATAAATGACAGTATTGATTTGATGTAGATCACTAATCTGGGCAC TTTAATTCTCACTCTGCAATTCAGGTTGGTTTGAAGTACAGCGAGTCTGTAGTTGTAAGGGTAACTGGCTGCCCTAATGG TTGTGCTAGACCATACATGGCTGAGCTTGGACTGGTTGGGGATGGCCCAAATAGCTATCAGGTTTGTTGATCAGTGGCTC AACCCACTTACAGTCAGTAGAAAACGCTTATCTTGTTCACTTTCCCCCCCCTTCTGATACAGATTTGGCTGGGAGGAACC CCGAATCAAACATCGATAGCTCAAAGTTTCATGGACAAGGTGAAGCTTCAAGACCTTGAAAAGGTTCTGGAGCCTTTGTT TTATTATTGGAAGCAAAAGCGTCAATCTAAAGAATCATTTGGTGTCTTCACAAACCGAATGGTGAGTTCTAACTTTGTAC TTTGCATCTTTGAGCATTTTTTATTTGCTTTCTTTTTACTTCCTCCATTAATTTTATGGTCTCATTGATATTCACTTTTA AAATTTCAAGAGAGAATAAAAAATGTTTTACCAATTATATCCTTAACTTAAAACAATTCTTAGTGGTGATAGGAAAATTG AGGAGTCAAAATAAATAAGAAAGGTAAAAGGTATATAGGAAGTTAGAAGTATTAATAAAAGTGAGAGGATTTATATTGTT TCTACTACAAATGTGTCTGATCGTGGTAGATACAAAGGGGCAGAAGTAGTATTACTCTTTAAAATGATTATTACTATGAT TGTTGAAGTGATAGGTCAGCATGGCCAAAGTCACACCATTTTTTTGTTTCTAGGGATTTGAGAAGCTTAAAGAATATGTT GAGAAATGGGAGGGTCCAGTACTCCAGTAGCCGCACCAACATGCCACAACCTTTAAAATGATTATTACAATGATTATTGA AGTGATAGGTAAGTCTGGCCAAAGTCACACCATTTTTTTGTTTCTAGGGATTTGAGAAGCTTAAAGAATATGTTGAGAAA TGGGAGGGTCCAGTAGCAGCACCAACACGCCACAACCTTCAGCTTTTTGCTGACAGGGAAACATATGAAGCAATGGAGGA ATCAGCAAAGCTTCAAAACAAGACTGCTCATCAGTTGGCCATGGAAGTTATCCGCAATTATGTTGCTGCCAACCAAAATG GAAAAGATGATTCATTTCATTGACATGGCCAATGAAGGAAGATTAAATGTGATGTTGCTTTGTGCTTGACTGCAATGGTG GATAGGCCACTGAAGGAAACTCTCAGTGCTCTTACTGCACGGTAAGCCTGGGTGTAGATTAAATTAGTCTTTGGGGAACA GCTTTCAGCTAGAATCCCTTGGTGCACGATTTTCATTATGAGATTGTCTGAACACAAAATAAGCCTTCCTATAAAAAAAG GGTTTTCAGGCAACTTTGTTTCTCTTCACATTAATCCTTCTTGATAAGATTTTTTTCCTCAATTTTGTTCTTGTACCAAT GAAGTTAATCAGTTAGGATTTGTTGTTTGTAATAATGTTGTTTATTAGCTTGAGATTATGGTATGTGATGTGTTTGGGCT GGAATCATCTTCTCTCTTATTAGCAGCTTAATGAGGTTGTCTTTATGTCTTTAAGGTGAGTTTATCTAAAGCTGATTTCA TTATAAGTATTTGTAATGAAATCATCTTCTCTCTTATTAGCACGCATACATACACACGATGGTGTCTTTGAAGTTTTAAT CCAGGGCCGACCCCACGTATATGATGGATCAAATTTTCAGTTTTTAAAAGTTGTTGTCTATCTTATATGAACTAAGTGTG CGTTTGGATTTCGGTTGAATCTCAATGTGAATCCACATTGAAGTTAACGCGTTTAAATCATGGTTCTCAGATTCAGACTC AACATGTCAAATTCTAATGTCTTCATTGGTGCATTGAGATATGTTAAATCATGCTGATGTTGGTTTTAACACCAAATCAA GCATCATGCACTCTTCTCTTTCCCGGAATCTTGGCCCCAGATTTGGTCCTGGTAACGGTGCAATTAAAAGCTTTTTCCAA TTTGAATTCCTTCTTCTTTTCTCCACCAACATCCACATGCACTAACAAGTGTCACAATTGCTACAATGCATTTTCTACTA CTATCATGTTGTTCAGCTCTCTCTATCGCGTGACACTCTCTTCCAACACTGTTACGCTAAAATACATTTTAGAACTAAAA AGACCCTTATGTCTTTCAAATTAAAAGTAAAA
CDS sequence (LotjaGi3g1v0537300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGACGTCGTTCGCAGCAGCATCACCGGCTCTCAGAGACCCCAACCTCCACATCCCAACCTTCCATGGCCTCAGATC TGCTCTCACTCGCAATGCCCTCCCATCCACGCGCTCCCTCTCGCTCATACGCGCCGTCTCCACGCCTGAAACTGTGACTG AGAAGCGTAGCAAAGTCGAAATAATCAAAGAGCAAAGCAATTTCATAAGATACCCTCTCAACGAGGATTTGCTAACAGAT GCTCCCAATTTGAGCGACTCAGCTGTACAGTTAATCAAGTTTCATGGCAGCTACCAGCAGTACAACAGAGATGAGCGTGG CTCCAGAACCTACTCCTTCATGATACGCACTAAAAACCCTTGTGGGAAGGTTCCCAATAGGCTTTACTTGACCATGGATG ATCTCGCCGATCAATTTGGAATCGGGACGCTTCGATTGACTACCAGGCAGACGTTTCAGCTACATGGGGTTGTCAAGCAG GATCTCAAAACTGTTATGGCTAGCATTATCAGGAACATGGGGTCCAGTCTCGGTGCTTGTGGTGACCTTAACAGGAATGT GCTTGCTCCTGCGGCTCCCCTTGTGAGAAATGATTACCTCTTTGCTCAGCAGACCGCGGAGAATATTGCGGCGCTACTGG CTCCGCAGTCTGGTTTTTACTATGATATTTGGGTGGATGGGGAGAGGATTATGTCAGCAGAACCGCCTGAAGTTGTTCAG GCGCGAAATGATAATTCTCATGGTACAAATTTCCCTGATTCGCCTGAGCCCATTTATGGAACTCAGTTCTTGCCAAGGAA ATTCAAAGTTGCAGTTACTGTGCCAACTGATAACTCGGTGGATATCCTCACGAATGATATTGGGGTTGTTGTTGTTACTG ATGATGATGGGGAGCCTCAAGGGTTCAACATATATGTTGGGGGAGGAATGGGAAGAACACATAGGAATGAAAGCACTTTT CCCCGGTTGGCTGAACCGCTGGGTTATGTACCGAAAGAGGATATTTTGTATGCAGTGAAAGCAATTGTGGTTACACAGCG AGAAAATGGGAGAAGAGATGACCGCAAGTATAGTAGAATGAAATATTTGATCAGCTCTTGGGGAATTGAAAAGTTCAGAA CTGTAGTTGAGCAATACTATGGCAAGAAATTTGAACCTTTCCGCCGCTTGCCAGAATGGGAATTTAAAAGTTATCTTGGG TGGCATCAGCAGGGTGATGGCAGTTTATTTTATGGGCTTCATGTTGATAATGGTCGTATTGCTGGGAAAATGAAGAAGGC ATTGAGGGAGGTTATTGAGAAATATAATTTGAACGTTCGACTTACTCCAAATCAGAACATAATACTGACTGACATTCGTG CTGTGTGGAAGCGTCCCATCACAACAATTCTCGCTCAAGCTGGTCTTTTGCAACCTAGTCTTGTAGATCCCCTCAACAGG ACGGCAATGGCCTGCCCTGCTTTCCCATTATGTCCATTGGCTATTACCGAAGCTGAACGTGGGATACCAGACATTCTTAA ACGGGTTCGTGGTGTTTTTGAAAAGGTTGGTTTGAAGTACAGCGAGTCTGTAGTTGTAAGGGTAACTGGCTGCCCTAATG GTTGTGCTAGACCATACATGGCTGAGCTTGGACTGGTTGGGGATGGCCCAAATAGCTATCAGATTTGGCTGGGAGGAACC CCGAATCAAACATCGATAGCTCAAAGTTTCATGGACAAGGTGAAGCTTCAAGACCTTGAAAAGGTTCTGGAGCCTTTGTT TTATTATTGGAAGCAAAAGCGTCAATCTAAAGAATCATTTGGTGTCTTCACAAACCGAATGGGATTTGAGAAGCTTAAAG AATATGTTGAGAAATGGGAGGGTCCAGTAGCAGCACCAACACGCCACAACCTTCAGCTTTTTGCTGACAGGGAAACATAT GAAGCAATGGAGGAATCAGCAAAGCTTCAAAACAAGACTGCTCATCAGTTGGCCATGGAAGTTATCCGCAATTATGTTGC TGCCAACCAAAATGGAAAAGATGATTCATTTCATTGA
Protein sequence (LotjaGi3g1v0537300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTSFAAASPALRDPNLHIPTFHGLRSALTRNALPSTRSLSLIRAVSTPETVTEKRSKVEIIKEQSNFIRYPLNEDLLTD APNLSDSAVQLIKFHGSYQQYNRDERGSRTYSFMIRTKNPCGKVPNRLYLTMDDLADQFGIGTLRLTTRQTFQLHGVVKQ DLKTVMASIIRNMGSSLGACGDLNRNVLAPAAPLVRNDYLFAQQTAENIAALLAPQSGFYYDIWVDGERIMSAEPPEVVQ ARNDNSHGTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVTDDDGEPQGFNIYVGGGMGRTHRNESTF PRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRTVVEQYYGKKFEPFRRLPEWEFKSYLG WHQQGDGSLFYGLHVDNGRIAGKMKKALREVIEKYNLNVRLTPNQNIILTDIRAVWKRPITTILAQAGLLQPSLVDPLNR TAMACPAFPLCPLAITEAERGIPDILKRVRGVFEKVGLKYSESVVVRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGGT PNQTSIAQSFMDKVKLQDLEKVLEPLFYYWKQKRQSKESFGVFTNRMGFEKLKEYVEKWEGPVAAPTRHNLQLFADRETY EAMEESAKLQNKTAHQLAMEVIRNYVAANQNGKDDSFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 34 | 625 | 592 | 0.0 | – | |
| PANTHER | 34 | 625 | 592 | 0.0 | – | |
| TIGRFAM | 48 | 619 | 572 | 0.0 | ||
| SUPERFAMILY | 53 | 180 | 128 | 4.09E-26 | ||
| Pfam | 110 | 168 | 59 | 2.1E-14 | ||
| Gene3D | 114 | 191 | 78 | 1.7E-17 | – | |
| SUPERFAMILY | 181 | 396 | 216 | 1.16E-52 | – | |
| Pfam | 206 | 384 | 179 | 4.6E-51 | ||
| Gene3D | 254 | 391 | 138 | 1.0E-43 | – | |
| Gene3D | 392 | 471 | 80 | 5.8E-17 | – | |
| SUPERFAMILY | 399 | 472 | 74 | 1.87E-17 | ||
| Pfam | 402 | 453 | 52 | 2.9E-12 | ||
| SUPERFAMILY | 478 | 639 | 162 | 3.4E-36 | – | |
| Pfam | 479 | 618 | 140 | 8.0E-11 | ||
| Gene3D | 479 | 637 | 159 | 4.3E-32 | – | |
| PRINTS | 480 | 498 | 19 | 1.4E-9 | ||
| ProSitePatterns | 529 | 545 | 17 | - | ||
| PRINTS | 529 | 547 | 19 | 1.4E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Molecular function | Sulfite reductase (ferredoxin) activity | Catalysis of the reaction: hydrogen sulfide + 3 oxidized ferredoxin + 3 H2O = sulfite + 3 reduced ferredoxin. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0537300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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