Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0543200 |
| Transcript ID | LotjaGi3g1v0543200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT5G17010.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q6AWX0|XYLL2_ARATH D-xylose-proton symporter-like 2; TrEMBL-Plants: tr|A0A151TLZ0|A0A151TLZ0_CAJCA D-xylose-proton symporter-like 2; Found in the gene: LotjaGi3g1v0543200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95935952..95944930) extracted from Lotus japonicus Gifu genome v1.2.
TAAAGTCTTTGAATAGTGAGTGTGAATGAGTTGGTTTTGCATTTATATATGACCACTTTCTGCAATCTTGTACTTCTCTC TTCAAAGTTTCAAACTTTAATCAAAAGCAATGGCATCCGATCCTGAGCTATCCGCACTTTCCTCTCTCGCCGAGGTCCTA TTCTCTCTTCTTCTTTCATTCTTCATTGTAACTGTTTATACTGTATTGGGAGGGAATGAAACTGTTGTAATTCAGAAAGG AAAAAGGGGATTTTGGCTAAAAACAACCATAGGTTCAATGGGTATCATCAAAAATTTGAACTTGTTCCAGTCATTTTGAC TTCAAAGAGAACAACTTGAACTGCTTCATTTGGGGTTTTGAGCTTTTGGCATTCATGTACTCAAGTTAGTTGAAACACTA GAATAGATGAGTTGAAAAATTACAACATAGTTTTTATAGTTGTCCACTCTTTTCCTTGTTGACTGAATATTATATAGACA GGTAATATAGAAATAAGAGAAGTACAACAATTTTTGACTAGTTTATTTTTTTTTTTTTTTTTTGGGTACATACTAGTTTT GTTAGAAGTCCCACATTGGCTAGGGATAGAGCCAAGATAAGCTTTATAAGGGTAGTGCAAACCTCAACTCTTGAGCTAGC TTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCATTTGTTGTGGAGACCTCC CATTATTGGGCCACCCGTTGTTAATCCCATGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCCAAGATAATAA GGGTAGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCTTCCCAATTTCTAATAAGTTTTGTTTTTG ACTAGTCATTTGTATATATTTGGTGTAAAAATTTGCAAAAAGAGAATAAGCTGAATGCTTGCAAATTTTTCATTCACACA TAAAGAGCTGGATATTGTTTAACTTGTAACTGATTTTATTTGTGCCTATCTTTTGGTGTTTATTTTCACTTTTATGACAC TTGAAATGCATTGACTTTCATTAGGGAGGAAAGCAATCTGGTGAAATTAGTGGTGCAAGGGAGCCTCTGCTCAATGGGGT TCATGACTCTGAGTCTCGAAACTATTCCATTTCTGCAGCAATTCTCCCGTGAGTATTGCCCTTTTAATTATTCCTTCTGT GATAATATTTATAGTTATTTTATTTAGGAAAATTACAATTACAATGTGTAGCTACATAAAGAATCAGCTTTTTAGCTTGG ACTCTGGCTATGGTAGAGAACTATAATTTCTGTAAGTTGTGTTATGCTGAGGACTGTACTTTCTAGGAGTGGTGTTATAT TGATAATGTTTGCTGGGTGTAAAGATGTGTCGATCATGAAGGTTAGAGGATGGCTGATGCTCATTGCATTGTCGTGGGGA AGGAATCAACCGCTCTTCGTTTTGCATAACATATATATCTCTCATCCTTATCTCTTAGGAAGTGTTTGATTTTTGGAATC TTATGCCCTTTTGCAAATATTTAACCGGACTTCCAGACAAAGAAGACCATCCTGCTTGGTTTGTTACTAGATTTCTATGA AATACTAATAGTTTGTTGTTTTTGTAAATACTGCTGTGGTGGTGTTGTGGTTAGGAGGAAGCTGTAGGCAGCCGTGAACA TTTCCGAATCTTGAATAGAACACATTATACATGGTTTCCTTTTGATAGTGTTTCTAGAAATCATTTGATGTCCATATATC ACATGCCATCTCGAGCTTTTTTTCCTGTTAGAAAAAACCAAGATTCCCCCCCCCCCCATCCCCCCAAATGCAGTCAGATA CATGGATCAGGTGATGCCATAATGTCCTTTCATGACTTAAGTTCAAGGATAGATAAATATCTCTAAATGATTTGGCCTAT AGCTTTTTCTGTCTCTCTACCCCTAATTTATCTCTTCTCAATTTCTATTCAATCAAACAAGAGAAGAGTCTTTCTTTCTC TTCTCTTTCTCATCTATTTCTCTCATACCAAACAACTAAATTAATCTACTCCTTTCCCGACCACCTACTCTCTACTCATC TTCTCCTTTCTCACTTTCTCTCATAAACCAAACATAGTGTGAGTGAACACCTAGTTAATGGTGCGAATCTTCTGTATTTA CACTTTGTGCTCACACACTAGATGCGGCCCCCTTATACGAATCTTTGATTGCTCTCATGTCAGCAATCTTTGATTCTTTC TTCTCTAATGCCCTCCACATAACCTCTCTAAGTACTGTATCATGCCTTTCCAAAACAATGAAAATCGTGTGTTGGCCTTT TTGATTCCTCCAATATCTTTTCATTAACTTTGTGGCAAGTATATAGCGTCTATAGTGCAGTTAATATCGTATCAAAATAA TCAAGTTAACTCATGTTGCATGCTATAGGGTTGATGAAATGGATATCTATTTTAACTTTCTTTTTAGATTTTTTTTTATC TTCTTTCTGGTTGATATTGATTAAACAATTTAACAACTTAAAAAACAAATTGGCATCATTTTGTGTTCACTATCTCCCAC TGATCTATCTTTTGACAGTAAGTTATAATTAATTTGTGGTACTTTTTCAAGTGAAAAAGGAGATAAAATAAAATAAATGC TCTGTCTGTAGTCTTATCTAAAATTTGTTTTAAAATCTCAGATTTCTCTTCCCAGCTTTTGGTGGCCTACTATATGGTTA TGATATTGGTGCCACATCTTGTGCAACAATTTCCATTGAGGTATACCCTGCTACTATAATTTAGGTTTTGACTTAACATT TTTATAATATTCATTTGGTGGTAAGGCGCTTGTAATAATTTCCTGATCTTAAGAGGTCCCGATTTTTCTGCTGTATATCA CTAATTAGTAATTACTTTTTGTCCATCTGAAGTATAATTTCATTGCAGATTAGTTTTTTCTTAGTTTATCTGTAATGCTT TCCATATACTTCATTGGATATGCCTATGGTGATTACTGATTAGTTGTAATATGTATTGCATTGCATCATACAGATCCTTA TAACAGTGGCTTAACCAGTAAATTTATTTTCAGTCCTAACAGTTACATGAGCTCTTTAATTTTGTTTTTATGCTTCGATA TATTTTCCCCTGTCCAAGCCATCAATAGAGATTCAAGCTACATATGGAGTGTGAAGATTATATAGCTAATTTTTTCTAAT TTCAATTTGATATTGAACTGGAAATCCACGGGTCCAAGTAAAATTTTGGACAGAGGTGGGTGGCTCAGTATGGATCTAGG ATAGGCTTTGTTCCATCTGAAGAATTGCCATATAGGTAAACTTTTTAACCTAGTGTGTTAATAATTGGTAAGGAATAAAG TCCTGAAGCAACTCATTCATATTAAAAAAATAAAATTGAACTATTTCATTTTCCTGCAAGAATGGAACTCTTTGGAAGGC CACTCGCCAGTGATAACAACAATGTAGCCTTTTTCATTGTATAATAGAACTGGCTTCTGGTATGATTGGAACCTTATTTA TTAAAGTATGATGCTTTCTTATTCCAGGACTAGGATCTTATACAGAAATATAGATATTTTTTATGCTGACTCCTTTATTG GGTTACTATGACTGAATTTAGTGTAACACCGACAGTTTCTTTGGAAGCTGGTATTCAGTTGTATTTTTTTAATGGTTTGG CTGTATACTCATAAAGTTGTATTCCCTTCTTTGCAGTCATCGACTCTAAGTGGAATAACTTGGTACAACTTGTCTTCTGT TGAAATTGGTCTTGTTGTAAGTTTAAATTAAATTCTTGCTTTATTCTTTTTTCGGCTAATGGTTACATTACATTACCCTT TTTTCATTCTTATGATACATTTGTTATTATATATTGATCTTGAATATTAACTCATTTGCCGGTGCTTGATGTCTGTTGCA GACTAGTGGATCACTATATGGTGCCTTAATTGGCTCTGTGTTGGCCTTCAACATTGCTGACTTCTTAGGCAATTTTCATC TTTTATCAGTTACCATTTTAGGTATTTCGTCCGTGGGGAAGCTGACATGACAAATTTGAAATTTAGGTAGAAGAAGGGAG CTACTTGTAGCTGCATTGATGTATCTTGTTGGAGCCCTTGTAACAGCATTAGCTCCTAATTTTCCTGTATTGGTGGTCGG GAGATTGGTGTTTGGCATAGGAATTGGACTGGTATACTCTTTTTTACCCAATACTGAGCTTGTAAATGTTAGTTTCTAAT TTGTCGAGGTAGCAAACCACACAGACAACTGGATGTGTAGGATTTCAGTCGTTTGTCTTAGAAAAGTTAAGGATCTGTGG GCCTACACTTAGGAGAGTTGGTTCTTGACTTGATATTAGAGCTTCCCAAATTAAGGGTTGGGGTCATTTCCTTCATTCTT TATAACTAAATTGAGTTTATAGACAGGGAATGGGGGACCTCTACTTCTTCAATGCTTCGGTTCAAGGGGGCAGAGGCCGA GGGAGGGGACAGGGCCCTGCCATGGTAGTGGTACACCCCTTCTAATTTTCTTTATTACTAATTTCGTTGATGGCCTCTAC CGAATAAGTTAAATTTTCACATAGCCTTTTTTAATTTATGGAAAGTTTTTGCAAAGGATATAATCTTTACTATTAACCAT AAGGTTCTGTGTTCAAACATTCAAGCAATGCACTTATGATGTGCATAATCTCCCATAGAGCATCGCTTGACGTAGTGGCT GGTACATGCTTTTATTATACTCTGAGATTCCGGGTTTGAATCCTCCCACATGTAATTTTCACTTTGTCTAGAATACCGGT TCTAACGCAAACAGGTCTGGTTCTACTGGTTTAATACCGAGTCAAGGCTGGTTCACAGGTCTGATACTGGTTTAACTGTA AAACAATATAATATGCTTGACCGGACTGGCGATAGTTAAGGTTCCTCGTCGGATATGCAAACAATAATATCATATCATAA ACTAACTATCCCAAAAATTGAAGTTGTTAGGTTAAGGCGGATAAATGGGTTTATACTTCTATATCTAACAAAGTTATAGA GATCTAGTCAGAGAAGGAGAAAAAAGAAAACAAACCCTGAATAGTATAATAAAATATTAATATATGGACGTAATAACCCG TCTACATTTAATGTCAACTTGTAATTTAGTGCGATGTATTATATTGTACTTTATACAGTATATGCTTTAGAAATAATCGC AATGGACTAAACTTGCATGGAAACATGAAAAATAAAAAGGGTTATTCTGCATGTACAAAATATTGTTAGTTAAAGAATAT TGGAGGTATTGTTTAATCACAGTGTTGTGTATTTCTTCTATGACTCGTGAACTTTGAGGCGAGATAATGATCTTCATTTT ATCTCTCGTAGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACACCAATACGTGGTCAATTAATCTCT CTGAAAGAGTTCTTTATAGTACTTGGAATTCTTGTAAGTTTTTGAATGGTATAGTTTCCTCAGAAACAATATTTTATAAC CAATATACTTTCTGTTATAGTCTTCTAGTATTATAAAATGGCTATATATCATTTGTACAGGCAGGATATGGGATAGGTAG CTTGTTGGTAGACACTGTAGCTGGGTGGCGGTACATGTATGGAGTCGGTAGTCCTGTGGCAATTATAATGGGAATTGGAA TGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTGCGTGCTATACAGGGAAAAGGGGATATTCAGAATTTGAAAGAC ACAGCAATTAGTTGTTTGTGCCAGCTTCGAGGTCAGGCTATTCATGATTCAGCTCCTCAGCAAGTAGATGAGATTCTGGG AGAGCTTTCTTATTTAGGTGAAGAAAAAGAAGCTTCCTTAAGAGATATGTTCCAAGGAAAATGCAAGAAAGCCCTTTTGA TTGGTGGAGGATTAGTCTTGTTTCAACAGGTATGTCAATTGATCAAGTGAATTAGTAATAATTATATGCCAAAACTTTCA ATGTATTTACTCTATAGACTGCAAATTTGTGACAGATCACAGGGCAACCAAGTGTGCTCTACTACGCTGCGTCAATCCTT CAGGTGATATGTTAATATTAATCAAATTCATATAATCTATTACCTGGCCCCAGTGGAGTGTAATAACATTGCAATCCTAT CTAATTTGGTAGAGTGCAGGGTTCTCCTTAGCATCTGATGCAACTCGGGTCTCTATTCTCCTTGGTGTATTTAAGGTAGA TTCCATTTTCTTATATTCTCAATAATTACCCTAATTTATATAAAAACATCGTAGTAGTACTACAGTTCTGTCAGTTTCAT ATGTTATATGTAGGTCGATGTCTTTTTTTACAATATACAAATTTGAATTATGGATTGTGCATATGAAGTTACCGTTCAAG CTTTGATATGTCATTTATCCAACTCTTTCCTCTGCTATTCTAGGATGCAATGAGTTGACTGCCTTGTACTCTTTCCTCTG CTATTTTAATGGATTAGAATTTTAGACAATGATGACACTAGCATCCGTAGTTTCACTTCTAATTGATTTCACTTAAATGA TGACTCCATGTTTGTGAGTTCCAATATGTCTATGCAAAAGCACTTGTGATACCATTAGTTTTGAACTATTATTGTTAAGA GCAAGGTAAGTTGTTTCTTTTCCATCTTTATGATGATAGAAACCTTCAAAGAGCCATACCACAAAAGCTAGTCGTTGTAG TTTGAATATTGCAGTGCAAGGGTGACCACCTGCAGTGCTTGTTTGCAGCTAAGAGACATGGTCGAAGACTCTGATACCAA TTGATAAAAACCTTGGGAAAACCATATCACGGAAGCTAGTTGTTGTAGTTGGAGAGCTCAAGCCTTATAAACCCCGCATA TTGATCTCATACTTACAATGTAGGACTCCAAGTCCCATTCGTTACAAGGGGATTCTAACATCCAATGTGATATGTCACAT ATTAAAGGAGAAAAAAAGGGAAAAAAAAAGTGAAGAAGAAGGATTATATATATTTCATATTTTCCTTGTCTTGCCCCCTC CCGCTTCCGCTCACCCTCCCTCTTGCTCTTTTCATTTTATCCTTTTTCATGCCAAATGCATGACCATCTACTTCTATCCA GTCACTAATGTTTTCCATGGCAACTTCGTTCTGTTTCTGTTATAGTTGATTATGACTGGAGTTGCTGTTGTCGTTGTTGA TAGACTTGGAAGGAGACCTTTACTACTTGGAGGAGTTTCAGGGATGGTAAGTTCCTTCTTATTGACAGATGGTTTTCTTT AGCAATTTCCTGAGAAAGAAACCCTTCTGCATTTCTGGCCAGTCTGCAAATTAGTCCTGTGTGCATGGTCAGCGTCAACT AAGCTAATTATACAAGACAAATGATTGTAACATGGAAATTTCAGTTGTGAGACAATGTTCAAAAATTACGAGCACATTGG TATTTGTACTGCAGGTGATCTCTTTATTCCTTCTGGGTTCATATTACATTTTCTTGGATAATGCAGCAGTTGTTGCTGTA GTTGGTCTGCTTCTGTATGTAGGCTGTTATCAGGTGAATAAGCTTATTTTTGTTTTCATTCTTCATATCATTATCATGAT TTGTATCATGTTTGCTGGAACCTTTCACCTAGAAAAGGAATATCATTTTTTTTCTCAAAATGCTCACATAAATCTCTCTT TTTTTCTTTCTCAGATTTCGTTCGGTCCAATTGGTTGGCTCATGATATCAGAGATTTTTCCCTTGCGCCTAAGAGGTCGA GGGCTTAGTATAGCTGTACTTGTGAATTTTGGTGCAAATGCCCTGGTGACATTTGCTTTCTCCCCACTGAAGGTGATGAA GATCTTGAACTGGAGATCATATATTCTAAATCTAGCATCATCAATCAGATGATTGCATATTTTGCAAGGATCTGATCTTA CAACATCATACATAAGCATGTGATTCTTTTGTTTTTTTCCCTTCAATTGCATATGCCATGTCTTTTTATTGAAACTGGTG TTCATGTGAATTATTGAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCGGCTAATTAGGCTGAGAAATGAAGAGAATTTTGTACCCCATTGTTACTGTGCTTAGGCTTA GCTTATTACAAAAACATAATACTGAACTCACTGTTCAGTGACTTCATTGAAATTGCCTCTTACTCTTTGCTTTTGTTTGT GTAATTCACAGGCATTGCTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAGCCGTGGCATCCCTTGTATTCATA TTCTTTGTTATACCAGAAACCAAGGGGCTTACACTGGAGGAAATTGAGGCCAAATGCCTGTAATCACTCACCTTGTTAAC GCATGTTTGGAAATCCTTCAATAGTTGATTCTAAGGTCAAAATCAATTCTTCAAAGAAGCTTATGTGAGTAGCTTCTGAG GAAAAATGAGTTTGATCCAATGTGAGTAGCTTCGGTAATTATCTGTTACAATACTCTGCTTCAACTTGTCTTGAATCCAA TGTATCTGTAATGACACATTATATCCATAAACAATAAGTAATAATGAATTTAGGTTTACTTAAGTTTTTTGTTGTCTGCA CTGGAGTACTGGACAAATCAAAGACAAATTTTGCATCTCAATTATTTCTGTACTTCAGTTCTTCCTGTAAACATATGAAA GTTAGTGTGTGCTTAAAAAGGGATTATCTGAAAAACTTTCTATCCTCATCAATTCTCATTGGGTAAAATCAATTTTAAAT GGGCTACATGTATCAGGAAGAATTAATTTCATATTTAAAATCAATTTTGCGGAGAAGTTTGAGAATGTCCTTATTCGGGG GTATGTAATTAATTATGTGATTTTACAATTGTATTTTACGTAACGTTGCCGAAATTACTTTTTCCATTAATGTATTTAAA TGTGAACACTGATCTAAAC
CDS sequence (LotjaGi3g1v0543200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCGATCCTGAGCTATCCGCACTTTCCTCTCTCGCCGAGGGAGGAAAGCAATCTGGTGAAATTAGTGGTGCAAG GGAGCCTCTGCTCAATGGGGTTCATGACTCTGAGTCTCGAAACTATTCCATTTCTGCAGCAATTCTCCCATTTCTCTTCC CAGCTTTTGGTGGCCTACTATATGGTTATGATATTGGTGCCACATCTTGTGCAACAATTTCCATTGAGTCATCGACTCTA AGTGGAATAACTTGGTACAACTTGTCTTCTGTTGAAATTGGTCTTGTTACTAGTGGATCACTATATGGTGCCTTAATTGG CTCTGTGTTGGCCTTCAACATTGCTGACTTCTTAGGTAGAAGAAGGGAGCTACTTGTAGCTGCATTGATGTATCTTGTTG GAGCCCTTGTAACAGCATTAGCTCCTAATTTTCCTGTATTGGTGGTCGGGAGATTGGTGTTTGGCATAGGAATTGGACTG GCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACACCAATACGTGGTCAATTAATCTCTCTGAAAGAGTT CTTTATAGTACTTGGAATTCTTGCAGGATATGGGATAGGTAGCTTGTTGGTAGACACTGTAGCTGGGTGGCGGTACATGT ATGGAGTCGGTAGTCCTGTGGCAATTATAATGGGAATTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTG CGTGCTATACAGGGAAAAGGGGATATTCAGAATTTGAAAGACACAGCAATTAGTTGTTTGTGCCAGCTTCGAGGTCAGGC TATTCATGATTCAGCTCCTCAGCAAGTAGATGAGATTCTGGGAGAGCTTTCTTATTTAGGTGAAGAAAAAGAAGCTTCCT TAAGAGATATGTTCCAAGGAAAATGCAAGAAAGCCCTTTTGATTGGTGGAGGATTAGTCTTGTTTCAACAGATCACAGGG CAACCAAGTGTGCTCTACTACGCTGCGTCAATCCTTCAGAGTGCAGGGTTCTCCTTAGCATCTGATGCAACTCGGGTCTC TATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTTGCTGTTGTCGTTGTTGATAGACTTGGAAGGAGACCTTTAC TACTTGGAGGAGTTTCAGGGATGGTGATCTCTTTATTCCTTCTGGGTTCATATTACATTTTCTTGGATAATGCAGCAGTT GTTGCTGTAGTTGGTCTGCTTCTGTATGTAGGCTGTTATCAGATTTCGTTCGGTCCAATTGGTTGGCTCATGATATCAGA GATTTTTCCCTTGCGCCTAAGAGGTCGAGGGCTTAGTATAGCTGTACTTGTGAATTTTGGTGCAAATGCCCTGGTGACAT TTGCTTTCTCCCCACTGAAGGCATTGCTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAGCCGTGGCATCCCTT GTATTCATATTCTTTGTTATACCAGAAACCAAGGGGCTTACACTGGAGGAAATTGAGGCCAAATGCCTGTAA
Protein sequence (LotjaGi3g1v0543200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASDPELSALSSLAEGGKQSGEISGAREPLLNGVHDSESRNYSISAAILPFLFPAFGGLLYGYDIGATSCATISIESSTL SGITWYNLSSVEIGLVTSGSLYGALIGSVLAFNIADFLGRRRELLVAALMYLVGALVTALAPNFPVLVVGRLVFGIGIGL AMHAAPMYIAETAPTPIRGQLISLKEFFIVLGILAGYGIGSLLVDTVAGWRYMYGVGSPVAIIMGIGMWWLPASPRWLLL RAIQGKGDIQNLKDTAISCLCQLRGQAIHDSAPQQVDEILGELSYLGEEKEASLRDMFQGKCKKALLIGGGLVLFQQITG QPSVLYYAASILQSAGFSLASDATRVSILLGVFKLIMTGVAVVVVDRLGRRPLLLGGVSGMVISLFLLGSYYIFLDNAAV VAVVGLLLYVGCYQISFGPIGWLMISEIFPLRLRGRGLSIAVLVNFGANALVTFAFSPLKALLGAGILFYIFCAIAVASL VFIFFVIPETKGLTLEEIEAKCL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 41 | 41 | - | – | |
| PANTHER | 22 | 502 | 481 | 3.7E-255 | – | |
| PANTHER | 22 | 502 | 481 | 3.7E-255 | – | |
| TMHMM | 41 | 63 | 23 | - | – | |
| Phobius | 42 | 63 | 22 | - | – | |
| TIGRFAM | 42 | 498 | 457 | 1.9E-96 | ||
| Gene3D | 45 | 501 | 457 | 4.5E-112 | – | |
| ProSiteProfiles | 50 | 491 | 442 | 52.191 | ||
| SUPERFAMILY | 51 | 499 | 449 | 3.4E-63 | ||
| Pfam | 53 | 500 | 448 | 4.9E-100 | ||
| CDD | 53 | 498 | 446 | 0.0 | – | |
| PRINTS | 58 | 68 | 11 | 1.0E-24 | ||
| Phobius | 64 | 82 | 19 | - | – | |
| Phobius | 83 | 112 | 30 | - | – | |
| TMHMM | 93 | 115 | 23 | - | – | |
| ProSitePatterns | 111 | 128 | 18 | - | ||
| Phobius | 113 | 123 | 11 | - | – | |
| TMHMM | 124 | 142 | 19 | - | – | |
| Phobius | 124 | 142 | 19 | - | – | |
| Phobius | 143 | 147 | 5 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 148 | 170 | 23 | - | – | |
| PRINTS | 148 | 167 | 20 | 1.0E-24 | ||
| ProSitePatterns | 153 | 178 | 26 | - | ||
| Phobius | 171 | 181 | 11 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 182 | 200 | 19 | - | – | |
| Phobius | 201 | 211 | 11 | - | – | |
| Phobius | 212 | 231 | 20 | - | – | |
| TMHMM | 218 | 240 | 23 | - | – | |
| Phobius | 232 | 304 | 73 | - | – | |
| Phobius | 305 | 328 | 24 | - | – | |
| TMHMM | 306 | 328 | 23 | - | – | |
| PRINTS | 316 | 326 | 11 | 1.0E-24 | ||
| Phobius | 329 | 347 | 19 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 348 | 366 | 19 | - | – | |
| ProSitePatterns | 361 | 377 | 17 | - | ||
| Phobius | 367 | 372 | 6 | - | – | |
| TMHMM | 372 | 394 | 23 | - | – | |
| Phobius | 373 | 394 | 22 | - | – | |
| Phobius | 395 | 399 | 5 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 400 | 425 | 26 | - | – | |
| PRINTS | 403 | 424 | 22 | 1.0E-24 | ||
| Phobius | 426 | 436 | 11 | - | – | |
| PRINTS | 426 | 438 | 13 | 1.0E-24 | ||
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 437 | 456 | 20 | - | – | |
| Phobius | 457 | 461 | 5 | - | – | |
| Phobius | 462 | 487 | 26 | - | – | |
| TMHMM | 465 | 487 | 23 | - | – | |
| Phobius | 488 | 503 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0543200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…