Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0546800.1

Overview

Field Value
Gene ID LotjaGi3g1v0546800
Transcript ID LotjaGi3g1v0546800.1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G51990.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9SV05|CCR35_ARATH Serine/threonine-protein kinase-like protein At3g51990; TrEMBL-Plants: tr|A0A0S3SEQ2|A0A0S3SEQ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0546800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:96331413..96334587) extracted from Lotus japonicus Gifu genome v1.2.

CGAAAATAAAAATGAAGGTTTGTAATTGTAATTGACTAATCGTACACTCCCAAAGACATCTTTTACCTAAATCTGCGGTG TCTGTTCTGTTGTTCTGTTGTTCTGTCTTTGTTCTTTGTATGTTCATTTCATCATCTTCCAATTCTCTCTGTTTCATTCA TATTCATATTCATATTCATGGGGTATCTCCATCTCTCTTGCAGAGCTGAATCCGCAGTTTCCACTTCCAATTCTCTATCA AACAAAGACAAAACCATCAAGATCCAACACTTCCAGTACACCGACCTTGAAGCCGCCACCAATGGCTTCTCCGACCGCCA CCTCCTCGGCAAAGGCAGCCACGGCTACGTCTACAAAGCCATCGTCCACGGCCGTCCCGTCGCCGTCAAAAGACCCTCCA GACCTCACTCTCTTCTCCCCCGACCCATCTCCTCCTCTTCCTCTGCTCCTGCAGAGATAACCAACGAGGTTGACAACGAG ATCGATATCTTGTCCAAAATTCAGAGCCCCAGGTTGGTCAATTTGGTCGGTTTCACCAATGATTCTAGGGACAGGCTTTT GGTGGTGGAGTTCATGAGCAATGGAACACTCTATGATGTTCTTCATTCCTCTGCTAGAACACCCAATTGGGGTAGGAGAA TTCGTTTGGCTTTGCAAACTGCTAAGGCTATTGATACCCTTCATTCATCAACCCCACCAGTCATTCATAGAGATATTAAG TCTGCAAATGTTCTCATAGACCGCCACTATAATGCAAGGTTAGGGGATTTTGGTTTGGCTCTGATGGGTCATGTCAATGG CTACAATTTCAGGTCCACTCCACCTGCAGGCACAATGGGGTACCTTGATCCTTGTTATGTGACTCCTGATAATTTGAGCA CTAAAACTGATGTGTTTAGTTTTGGGATTTTGTTGTTGGAGATTATCAGTGGAAGGAAAGCAATTGATGTTACATATTCA CCACCATCAATTGTGGATTGGGCTATTCCTCTTATCAAGAGAGGGAAGTTGGTGGCGGTTTATGACCCTAGAATACCACC TCCTAAGGATCCTGTTGTGAGGAAGCAATTGGCTGTGATTGCAGCAAAGTGTGTGAGGTCTTGTAGAGAGAGAAGGCCTT CCATGAAGGAGATTGTGAATTGGCTTTGTGGGTTGTGTAAGTTGGTGCCTCTTCATTCATGGAATGGTTTCAACAACCCT TGTATGATGGTTGAGACTGTGGGGAGGCCTGTTGAAGCAAGAAAAAATGGTGAATTCGGCGCGGAGGAAGGGAATTTTGA TGGTTTGGATGGTGCTAGATTGTCAAAGTCTGCAGTGAGATATTCAAGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCA ACTTGATGGACCTTATGGCTCACACTGAGGAGCCAGAGTTTCTAAGAGATGCTGATGGAGTAGAACACACTCAACAAAGT TCTAAACCAGCTGAGAAAGTTTCTAGCTCAAGATTTGGTAGTGGAAGATACTTCAGCAGAGGAAAAAATTTGTACCGGCC TTGTGGTGCTGATAAGGATGTGTTTGGCTTGAGTAAAGGCCAGATTGTTGGCGAGTCTTCTTCAAAACAGGATGTGGTTT CTGATTCGAATTTGAATTCTCTGGCAGCTGAGGTGATCTAGTTTAATTGTAGAAACATTTGATTGAGTGATGCTCAGGCT TGTAAGTTTTTTGCTTGCGAATTATACTTATGTGGATTTGTTGTTAGTTCATTATTTGTGGATTTCAGAAATGACCTCTT CATGTATCAGGAATTTGGATTGAAGGGCACATTACTGATGTCCCCTTAACTTTGTTCAAAAAAGTTTGCCAAAGGTTTTG TTCCCCTTTTTCTTCCCATCAATGACAAAATGCAAAAGTCAATGTATGATTCAGGAACTCATGAGTGTTGTTAGCCTTTT TTACATACATGAAGCTGCAGCAGAAAAATTGTAAAAATTCCTCCAATGCTTGTTAGTTGAATAACCTGTTTGTATGTATG TAGCTCAAATAAACTTTCAATACAAGTCCTGTTGTGAATTGTAATCCTTTTTGGCAATTCTATTATTTACTTTTTTTCTT CTTAATTTACTAACTAGTAGGCTTATTTCAAGTGAAGTCTTGGATTAATGCATGTTGTTGTATGCTCTATTATCTTATCA TTCTTTGATTCTTTATTCATCCATCTATGGTATGACCACAATCTTATGGCAGTCGAAATAAGTTTGAGCAGGGAATAGGG ATAGCATTTGATAATCAGTAATGATATTTAAACACTTCAATAGATACCCAACTGACACTTAATTTTCTCTTTATCTATTC TTATCACATTCATCATATATCACATTCATTACTTATATCTCTTCTCTTCCTTTCTTACTCCATTCTTACTCAAGGTGTTT ATGTGTACATATGATTCATCTTTCTTTAATTACAATCTCATTTGTTATAAGTTGCCTACTACCTTTTCATTTATATTAGC AAGAAGAAAAACATTTCTTCATAAGTTGTCAAGTTTGCCTTGGACTTTGGTCTTGTTTAGGAGAATTTATTTAAACTTAT CTTATAGATTAACAAACGTTTATGCAAGTATGTAGAAGAACTTATATAAATAGCTTATATTCTATATGTTGTTATGATCT TATTTTCATAAGCTGTTTGAACTAACTTATGCATAAACGCTTAAGCCTATTCATAAGTCATAACGTATCTTGAGTTATTT CAATAAATTTATCAAATTTGCTTATGAAAAAGCTGCTATGCGCTTATGAATAAGCTGCTATGCGATGAACATTTATTAGC ACATAGTTAAAATGTCTACTCGAACACATCCTTTGTCTATGCTTGCAATAAATTAGCATTATATTTCAATCAAGCAAATA TAATCCACAGGTCAAGTTTGCTTTCAGCAAATTTGTGGCGTAGATTGATATGCCACTATGGCACATGATGATAATTTTAT ATAAAACAAAGAGGGAATGACAAAAGATTGAGGGCACCATTTCCATAATAGTGGTGTGTATTATATAATGGGCCCCAACT AACCTGATAGCAAAGTTTTGATTCGTCATGTTGTGGTGGTCACTAGTTGAAGAATTTGTATTATCAACAATTGCTTAGGT AATAGAGACAGCTAGGTAGCAGAAAGTGGAATATTTTAAAATCTTGAAGTTTCCT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0546800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGTATCTCCATCTCTCTTGCAGAGCTGAATCCGCAGTTTCCACTTCCAATTCTCTATCAAACAAAGACAAAACCAT CAAGATCCAACACTTCCAGTACACCGACCTTGAAGCCGCCACCAATGGCTTCTCCGACCGCCACCTCCTCGGCAAAGGCA GCCACGGCTACGTCTACAAAGCCATCGTCCACGGCCGTCCCGTCGCCGTCAAAAGACCCTCCAGACCTCACTCTCTTCTC CCCCGACCCATCTCCTCCTCTTCCTCTGCTCCTGCAGAGATAACCAACGAGGTTGACAACGAGATCGATATCTTGTCCAA AATTCAGAGCCCCAGGTTGGTCAATTTGGTCGGTTTCACCAATGATTCTAGGGACAGGCTTTTGGTGGTGGAGTTCATGA GCAATGGAACACTCTATGATGTTCTTCATTCCTCTGCTAGAACACCCAATTGGGGTAGGAGAATTCGTTTGGCTTTGCAA ACTGCTAAGGCTATTGATACCCTTCATTCATCAACCCCACCAGTCATTCATAGAGATATTAAGTCTGCAAATGTTCTCAT AGACCGCCACTATAATGCAAGGTTAGGGGATTTTGGTTTGGCTCTGATGGGTCATGTCAATGGCTACAATTTCAGGTCCA CTCCACCTGCAGGCACAATGGGGTACCTTGATCCTTGTTATGTGACTCCTGATAATTTGAGCACTAAAACTGATGTGTTT AGTTTTGGGATTTTGTTGTTGGAGATTATCAGTGGAAGGAAAGCAATTGATGTTACATATTCACCACCATCAATTGTGGA TTGGGCTATTCCTCTTATCAAGAGAGGGAAGTTGGTGGCGGTTTATGACCCTAGAATACCACCTCCTAAGGATCCTGTTG TGAGGAAGCAATTGGCTGTGATTGCAGCAAAGTGTGTGAGGTCTTGTAGAGAGAGAAGGCCTTCCATGAAGGAGATTGTG AATTGGCTTTGTGGGTTGTGTAAGTTGGTGCCTCTTCATTCATGGAATGGTTTCAACAACCCTTGTATGATGGTTGAGAC TGTGGGGAGGCCTGTTGAAGCAAGAAAAAATGGTGAATTCGGCGCGGAGGAAGGGAATTTTGATGGTTTGGATGGTGCTA GATTGTCAAAGTCTGCAGTGAGATATTCAAGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACCTTATG GCTCACACTGAGGAGCCAGAGTTTCTAAGAGATGCTGATGGAGTAGAACACACTCAACAAAGTTCTAAACCAGCTGAGAA AGTTTCTAGCTCAAGATTTGGTAGTGGAAGATACTTCAGCAGAGGAAAAAATTTGTACCGGCCTTGTGGTGCTGATAAGG ATGTGTTTGGCTTGAGTAAAGGCCAGATTGTTGGCGAGTCTTCTTCAAAACAGGATGTGGTTTCTGATTCGAATTTGAAT TCTCTGGCAGCTGAGGTGATCTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0546800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGYLHLSCRAESAVSTSNSLSNKDKTIKIQHFQYTDLEAATNGFSDRHLLGKGSHGYVYKAIVHGRPVAVKRPSRPHSLL PRPISSSSSAPAEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSARTPNWGRRIRLALQ TAKAIDTLHSSTPPVIHRDIKSANVLIDRHYNARLGDFGLALMGHVNGYNFRSTPPAGTMGYLDPCYVTPDNLSTKTDVF SFGILLLEIISGRKAIDVTYSPPSIVDWAIPLIKRGKLVAVYDPRIPPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIV NWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARKNGEFGAEEGNFDGLDGARLSKSAVRYSRRVYSDLGFSSNLMDLM AHTEEPEFLRDADGVEHTQQSSKPAEKVSSSRFGSGRYFSRGKNLYRPCGADKDVFGLSKGQIVGESSSKQDVVSDSNLN SLAAEVI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF56112
21 323 303 4.45E-65
IPR011009
PANTHER
PTHR27001:SF213
22 341 320 1.5E-110 –
PANTHER
PTHR27001
22 341 320 1.5E-110 –
Gene3D
G3DSA:3.30.200.20
25 132 108 1.2E-20 –
SMART
SM00220
44 323 280 5.6E-21
IPR000719
ProSiteProfiles
PS50011
44 336 293 33.319
IPR000719
Pfam
PF00069
46 321 276 2.7E-36
IPR000719
ProSitePatterns
PS00107
50 71 22 -
IPR017441
Gene3D
G3DSA:1.10.510.10
133 330 198 2.1E-49 –
ProSitePatterns
PS00108
175 187 13 -
IPR008271
MobiDBLite
mobidb-lite
413 432 20 - –
MobiDBLite
mobidb-lite
418 432 15 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0546800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…