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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0553300 |
| Transcript ID | LotjaGi3g1v0553300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT5G51460.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|O64896|TPPA_ARATH Trehalose-phosphate phosphatase A; TrEMBL-Plants: tr|I1L5Q2|I1L5Q2_SOYBN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi3g1v0553300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:97077206..97079892) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACTGCTACCCCAAGAGCAGTGACAAGAAAACATTGAAGAAGTGGTTTTTTATTGATAAAAGAGTAGGGTGAAGTGG AAATCCAATACATATTAGTTTCTTACATTGTTGCTGGGTATAAATTGGTTTATAAACCTGGATCCTATGGACTTGAAGTC AAATCATACTCCTATTCTCACTGATGCTGCACCCATAACGAATTCAAGACTGCATGTGCATTCCAGTTTGTTTCCTTATT CCCATACTGGGGTAACCTGTCCACATAGCATGTTATTGACTATCCCGAGGAAGAAGACAGGAATTCTTGAAGATGTTCGT TGTAGCAGTTGGTTGGATGCCATGAAATCATCTTCACCTCCACCCAAGAATATGACAAGGGATGTTAGTCATGGGTTTGC ATCATCTGAAGCTGATACTGCTTTTGCTTATTTTACCTGGCTGGTATGACATCCTCCTTTTAGTTAGGGCTGGTTTGATT CCCTTGTTAGTTTATGGATTTAAAGAAACAAACTTCAGAACATGTTTTTCAAATGAAGAAAACAAAAAGTATTGTTTGAA CGATTCCAAAGCCGAATGACCTGTGGCTTGAAAATTAAAGACAGAATAAGAAAAACTTATGTGGTGTTTTGGAATTTCGG TTTTAAAAACTGAATATAAGAAATGTTCCTAAGGTTTGTTTTTGAAACCTGTTCATGTAGTTTTTCTTTTCTGTTTTTAA AATCTTTGAACTGTTTTATAAAATAGTAATCAAACATGCCATTAGTTTCTGAAGTCTACAATTTTTGGTGGTATTATTTA TGCCATTGCTTTTTCCATTTTGTTAATTTCACAGCTAAAATATCCATCAGCACTTACATCTTTTGATCAAATTACAAACT ATGCAAAAAGCAAGAGAATTGCATTGTTTCTGGACTATGATGGGACTCTTTCACCGATTGTGGATAATCCTGACTGCGCT TTCATGTCTGACCATGTATGTGATTGTCTCCTCAGGTTTAATGTCTATGACTTCAATTATAGTACATGCTTTTCTAGTTT TATGCTAATTTTGATCATGTAAACTCTACAGATGCGTGCTGCTGTTAAAAAGGTTGCTGAATATTTTCCTACAGCAATAA TTAGTGGAAGAAGCCGTGACAAGGTAGTTAAGTACTTCTATATAACACATACAATGTTCTTTCTTCTTTTGCTTCTCTTA TCTATTTTAACATGCTGACATACACACCTGCTCTCACAACTAGCTTCTTTGGTTGTTCTCGGTTTCAATTCTGACTTTCT ATGTCCCCTGTTGGCTCAGGTAAATGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCATGGGATGGACATCA TTGGCCCTGTTAGACAATCTGTATCTGATAACCACACTAATTGCATCATTAGATCTACAGACAAGCAGGTATTGGGGTTC AATGTTTCTATGAATTTCTATAATTTGTTTATTAATCTCTGTTGAACTTTCCGTTTTCTTTCTTCAAGTGTCTTAATAAA TGAACTCTGTCATGATCTTCAAAATTACAGGGTAAGGAAGTTAACTTATTCCAACCTGCTGCTGAATTTGTACCCATGAT TAATGAGGTATGTATTTGTCAAGTGCTAACATGAATCACCTTTTAATATTTTTTCTACATTGGGATTTTTATCCTGATTG ACTCATTTTTGTGCAGGTCCGCGAGTCTCTCATAGAGTGTACTAAAGACATTAAAGGAGCAAGAGTTGAGGACAACAAAT TTTGTGTATCTGTACATTACCGCAATGTAGATGAAAAGGTATTGGCTTCTGTTATACGCAACAATTTTCTGCTACATTGA TTTTCCTTGTCCTGAACTTGTTACCTGTTATGTTTGTAAGTCAATTTCTTTTCAATTTTATGTACAGAATTGGAATTTGG TGGGGCAACGTGTTAATGATGTTCTGAAGGGCTACCCACGTTTGCGATTAACTCACGGGCGCAAGGTGCTATTTTCAGAG CTAACTGTTGAGTCATTTTTTCATGGGAATGAAGTATTCCAGTTTTGAAGATTGTTTTCTCTTTTGTAATTTTTGCTTAA TATTTTTCAGGTTTTAGAGGTCCGCCCTGTAATTAACTGGGATAAGGGTAAAGCTGTCACATTTTTGCTCGAGTCACTTG GTAAGTGCATTTGTTGGTTATTTATTGTATGTTTGGAAACCTTTCTACAATTGGTCTTACACCCAGAATCGATTTTGTTG GAGAACCATGCATTTTGATAAAATAATTAATATATGTTTTTTTTAAGGTAATAATAGGTCTTTTTTTTGCTGTAATTGAC ATTCCAATATTGTTTTTAGGACTTGACAATTGTGATGATGTGCTTCCTATATATATTGGAGATGATCGAACGGATGAAGA TGCGTTTAAGGTAATGTTTAGCTTCCAGTGAAGCTGTAGCATGCCATGCACTTATTTCCTGTATTTGCATTCTTGCTTTG TTGTTTTGCTTAGTTCTAATGTCAAATGAGCTGTAACAGGTTCTGAGAGAGGGGAATAAAGGTTACGGGATCTTAGTATC TTCAGCACCAAAGGAAAGCAATGCAATTTACTCTCTTCGTGATCCACCAGAGGTAATTTCATCCTTGTAACCGAGTTTAT ATATTTTGTTTCAAAGTTTTCTTGCAGTTATTTGTTCAATTTATTAA
CDS sequence (LotjaGi3g1v0553300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTGAAGTCAAATCATACTCCTATTCTCACTGATGCTGCACCCATAACGAATTCAAGACTGCATGTGCATTCCAG TTTGTTTCCTTATTCCCATACTGGGGTAACCTGTCCACATAGCATGTTATTGACTATCCCGAGGAAGAAGACAGGAATTC TTGAAGATGTTCGTTGTAGCAGTTGGTTGGATGCCATGAAATCATCTTCACCTCCACCCAAGAATATGACAAGGGATGTT AGTCATGGGTTTGCATCATCTGAAGCTGATACTGCTTTTGCTTATTTTACCTGGCTGCTAAAATATCCATCAGCACTTAC ATCTTTTGATCAAATTACAAACTATGCAAAAAGCAAGAGAATTGCATTGTTTCTGGACTATGATGGGACTCTTTCACCGA TTGTGGATAATCCTGACTGCGCTTTCATGTCTGACCATATGCGTGCTGCTGTTAAAAAGGTTGCTGAATATTTTCCTACA GCAATAATTAGTGGAAGAAGCCGTGACAAGGTAAATGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCATGG GATGGACATCATTGGCCCTGTTAGACAATCTGTATCTGATAACCACACTAATTGCATCATTAGATCTACAGACAAGCAGG GTAAGGAAGTTAACTTATTCCAACCTGCTGCTGAATTTGTACCCATGATTAATGAGGTCCGCGAGTCTCTCATAGAGTGT ACTAAAGACATTAAAGGAGCAAGAGTTGAGGACAACAAATTTTGTGTATCTGTACATTACCGCAATGTAGATGAAAAGAA TTGGAATTTGGTGGGGCAACGTGTTAATGATGTTCTGAAGGGCTACCCACGTTTGCGATTAACTCACGGGCGCAAGGTTT TAGAGGTCCGCCCTGTAATTAACTGGGATAAGGGTAAAGCTGTCACATTTTTGCTCGAGTCACTTGGACTTGACAATTGT GATGATGTGCTTCCTATATATATTGGAGATGATCGAACGGATGAAGATGCGTTTAAGGTTCTGAGAGAGGGGAATAAAGG TTACGGGATCTTAGTATCTTCAGCACCAAAGGAAAGCAATGCAATTTACTCTCTTCGTGATCCACCAGAGGTAATTTCAT CCTTGTAA
Protein sequence (LotjaGi3g1v0553300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLKSNHTPILTDAAPITNSRLHVHSSLFPYSHTGVTCPHSMLLTIPRKKTGILEDVRCSSWLDAMKSSSPPPKNMTRDV SHGFASSEADTAFAYFTWLLKYPSALTSFDQITNYAKSKRIALFLDYDGTLSPIVDNPDCAFMSDHMRAAVKKVAEYFPT AIISGRSRDKVNEFVGLTELYYAGSHGMDIIGPVRQSVSDNHTNCIIRSTDKQGKEVNLFQPAAEFVPMINEVRESLIEC TKDIKGARVEDNKFCVSVHYRNVDEKNWNLVGQRVNDVLKGYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLDNC DDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAIYSLRDPPEVISSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 373 | 373 | 1.1E-200 | – | |
| PANTHER | 1 | 373 | 373 | 1.1E-200 | – | |
| TIGRFAM | 118 | 373 | 256 | 5.5E-44 | ||
| CDD | 122 | 371 | 250 | 6.62441E-60 | – | |
| SUPERFAMILY | 122 | 372 | 251 | 8.01E-43 | ||
| TIGRFAM | 123 | 342 | 220 | 1.6E-16 | ||
| Gene3D | 123 | 365 | 243 | 6.3E-44 | ||
| Pfam | 124 | 368 | 245 | 7.1E-75 | ||
| Gene3D | 203 | 299 | 97 | 6.3E-44 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi3g1v0553300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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