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LotjaGi3g1v0555600.1

Overview

Field Value
Gene ID LotjaGi3g1v0555600
Transcript ID LotjaGi3g1v0555600.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Adenylate kinase; TAIR: AT5G47840.1 adenosine monophosphate kinase; Swiss-Prot: sp|Q9FIJ7|KAD2_ARATH Adenylate kinase 2, chloroplastic; TrEMBL-Plants: tr|G7JRB1|G7JRB1_MEDTR Adenylate kinase; Found in the gene: LotjaGi3g1v0555600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:97322333..97326807) extracted from Lotus japonicus Gifu genome v1.2.

AAGGGTTCCCATTATTTATTCATAGTCCCTCCCGTGTTTTATGAAGTCAGGGTCAGGGGAAGGGGGAGGGGAGGAAGGGA GTGTGTGAGAGAGAGATATGAATTTGAATACGGCATCATATTCATGGAGCGGGTTGGGGATTTGCAATCCAATTGAGTGT AAGGCGCGTGGTGGATCTTCACTTCCAGTTAATCGCCGGCGCCGGCAACATCCCTTGCCTTCTTGTTCTGTTGCTTTCGG TGTCCGTTTGTGCTGCGATGCCTCTATCCGCTCTCATTCCCAATCTACGGTAGGTATCACTATCACTGTCACATCATCGC TGCTGCTTCAATTCAATTCATTCATTCATTTGTTAATTCATCACTCAGCCTGTCAAAGCAGCGGCGGCGGCGGAGAAGGA GGCTCTCCGTGTCATGATTTCAGGTGCTCCGGCTTCTGGTAAAGGAACTCAATGTGAGCTCATCACTAACAAAGTAACAG ACATTTTCCCCTCTCTTTCAATTCAATTCAATTTAACATACGTTTTCCAGCATTTGCTCTCTCAATCACCACTAATAATA CTAACACTAGATTCAACTATATATATATATATATATGCAGTATGGTTTGGTTCACGTTGCTGCCGGAGATTTGCTCAGGG CAGAAATTGCCACCGGAAGTCAAAACGGACAGCGTGCAAAAGACTACATGGAGAAGGGACAGTTGGTCCCTGATGAAATT GTTGTCATGGTATGGTATGCAATCCCTTAATTTATAGTATATAATTCTCTCGTTAGTAATACTCATATGATTTTATGGTA TATATAGATGGTGAAGGAACGTCTCTTGAAGCCAGACTCTATACACAAGGGTTGGCTTTTGGATGGTTATCCCAGGAGCT TATCACAAGCTACTGCACTTAAGCAATTTGGCTTTCAACCTGATATTTTCATTCTTCTAGAGGTAAATTTACTATTTCAT AACTTTCTGCCTCTCATTCGCCCTACTTTATCAGTTAATTGAGTTAGATGCTGCTAGAAAAGTAAAACAAATTGATTTCT AACAGCCATACTGGGGATACACAGTGATTGTATAAGAGGAGATATTGGGATGACTCCTACCACCGAGAAGCTGACTAAAA TTCGATTAAGATGGTATGAACATGTACCAAGAAAACTTTTGGATGAGAAGGGTCGATAACATGATCTTTAGTCATGTGAA GAGGGGTAGAGGGAGACCAAAAAGAACATTGAAAGATATTGTTGAAAATGACCTCATTATCAATAATATCTCTTAAAATT TGGTTTTTGATTTGATCGAGCTCAATGACGTAGTGTGATCCATATAGCCGACCTCACTTAGTGGGATATCATAAAGATTT TGTTTTTGTTGTTGTAATATCAAAAAGCCTTGGTCAGTGGCATATCATAACATTACACTCAACCAGTGTTATCAAATCGC GATCGCGGACCATCGCGGTCAGCCAAAAATCCGCTATTTCGGCCGCTATTTGGCGGCGAATAGCGGAAATAACGGGAATA GCGGGCAATAGCGGCGTCGCGATTAGCCAAAAATCCGCTACGCTATAGCGGCATAGTGCCGCTATAGCCGCTATTTGATA ACACTGCACTCAACTAGATCTAATGATCTCTCAAGGAAACCTTCATATGGAGTTATGGTTGTTTGAAGGGAAAGGAAGGA AAGGGTAAATCTTTTATTTTAAATAAATAGTTTTTAATTAGGTAGATTTTTAGAATGAAATCTATGAAATGACAAATTAG CATAAACATAATATTCTAATCATTTACTTAATTCTCTTAATTTAAAAACAAAAAATTGTCCTCCCCTCCCTTTCCCTCCT AAAACCCCCTCCCAAACACGCCCATCAATGATATGAACGACTATGGTGTGGCCTTGCAGTTGCAGGAGATAGTCACTGTA CTTCTGTTAAGACTGAAAACCATTATTAGTCTTGAAAGTGAAAAGAGTCAAAGTAGCTTTTATGATAATCCAAAGTTGAA TTTGCAGGTTTCTGAAGATATTCTTGTCGAGAGAGTAGTTGGGCGCAGATTAGATCCTGTTACTGGTAAGATATATCATT TGAAGTATTCTCCTCCAGAGACAAAAGAAATTGCAGAGAGGCTAACCCAACGTTTTGATGATACTGAAGAAAAGGTATGA ATATGTCCTATAAGAAGCTCTAATGCATTCTTTCTGTAAAGATCTTGATTCTTTTCTTGGAATTTGGAAACTACTCAATG CCCCCTGTTGACCACATTAGGGTTCTCTGTGTGTGTGTGTGTTTGTATGTGTAATATGCTCATTATTCAGTGCAACTGAA AGTTCTTTTCAATTATTTTTTTGCCTTTGACTTAGGTAAAGTTGCGATTGAACACCCATCATCAAAATGTGGAGGCAGTG CTTTCCATTTATAAAGACATAACGGTTAAGGTATGCTATATAACTCCTCTTTATCTCTCTCACACATATACAAGCATGCA AGCAACAACATGCACAAGTAATCTTGTCGAACATCAGTGGTGTGGATATCCTTAATAAACAATTACCAACCTACCACATA TATTAGCACCAACATGAGAATGGTACCCGTGTAGAGTAGACAATCCTTGCCACCACATTATAAGTCATGGATATCCACAA TCTATAGGCATTCCTACCTTGTTATTGTGGACTAGATGATAAGTATATTTCCTCAGCATGAACAAAAATTAAATTCATTG GCTTTTGTATATTTGAACTAAACAATAATATAGAACATTTGACGTTCTTTTGTTGTCTTCAGATTGATGGAAATGCCTCC AAGGAGGAAGTATTTGTTCAAATTGATGGTGCACTCACACGTCTTTTAGAGCAAAGGAAAGCTGCTTCAGGATCAGTGGC AGCATAGCAGGCATCTCTTTCTCTTGGCATTTTGATCTAGCATGGATCCTTGCTGTAGGTACAATGATTTTAAGTGATAT TTATTTGAGTTAAATGAGCCTTCACACAAAGTAAGTTGCATTTTCTCGTGAAGATTGATCCATTGAAATAGTCTTTCGGC TTTATATCTCATTGAAAGCAATGTGAGTTTGGACCTTGCAGGGACCTGTCATAGTAAAGTGCGCTGTGTTATGTTACTAG TTCATTTTGATGAGAAAATGATTACTTTAAAATAGTAGTTTTTGTGCAATTTGTAAATGTCGGATTTAGTGAAACCTCGT TTGTCGGTTCCTGTTCCTGTTCCTGTTTGTGTATTCTATTTACTGAAATAAATAAAAGAAGGAAAATCAGCTTATTTGAT GTTCTTGATTATATAATTTGCTCTGATGTTTTTACAGTATCATGACTATGAAGACTAACGGTAAAATGATTAACTGTGAA TGTTAATGGAGAGAATATTGAGGTAACTTTTTTAACATTTTGTTCATAAACATCTTAACAGGCCCTTGCTCAGTTCAGAT ATTTCCTAAAGCAGCTAATGGGATATAAATAAACTGTGTAATACCTTATGGGATTGAAATAAAAATACTTAACTTGGTAT TGCAATGAGCAATGATGAAAATGTTACAATAAACATTGCAGAAATAAGAGATTTAGAATTAACTTGTATATCATTGATTC CCTAAATAAAGTGTCAGGTTCGAGTCTTATGTATAAGAAAAACCTCCGCTATTGAGAGTAAGTCCCGCCAGGATGTGGAT GTTATCGGTTTAAATATGATTGTCTCTCATGGAGAATACTCGTTCTAAACTAAAAAAACTTGTCTATCATGGGATCTACG CTTATTATCATAAGTGCTTAATTAAGCTGTTTTTCACACACAACCTTATTCCTTTATTCCTGTATACATATAGGAGGAGG GTCGGGCGCCCTTTCATCCTTCACCAATTACCTTGTATTATATTAAATCGTCTGTGGGGGAGCAATGGTTAGAGTAGTTA AGCATTTTAAGTTGTTTTTGTGAAGTTAAGAAGCATTTTGAGTTGAAAACTTGCTAAAATGTAGATACTTTCCACCCACT TCAACAACTGATGTCGAAATTTCAAAATGAAGAATACATTAGACGAATTTTATGGTTGATAATCTTTGACTTCATGGACA AGACAAATTTGCCCGCTCCTCTGCTCCCGCTTCAGGTATCAATTGCAGTTCTATCAAATATAATCAGCATTTTCTTTGAA TAATTCTACTTCTGAACAAATCCTTGTAGCAATCTCTCTAGTTACTAGTCACTAATGTGTATTTGTTTTTCGGCCACAAT CACTAATGTATATTCATGCGTATAATGGAAAAGCATGTATTCAAATTCAAACAAAAAAATAAATCTGGTTTCATTTCTTT TATTTTTCTAAGTAGATATGTTCTATTTTATAACTATGAATATATCATTATTTTTACATCATTTATTGTTCTCAAGATTC TAAGCAGAAATCATAAAACTTAAACTTTGTTATTTTTATTGACCGTAAAAAAATATATATTTTTATTAGTTTCTT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0555600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATTTGAATACGGCATCATATTCATGGAGCGGGTTGGGGATTTGCAATCCAATTGAGTGTAAGGCGCGTGGTGGATC TTCACTTCCAGTTAATCGCCGGCGCCGGCAACATCCCTTGCCTTCTTGTTCTGTTGCTTTCGGTGTCCGTTTGTGCTGCG ATGCCTCTATCCGCTCTCATTCCCAATCTACGCCTGTCAAAGCAGCGGCGGCGGCGGAGAAGGAGGCTCTCCGTGTCATG ATTTCAGGTGCTCCGGCTTCTGGTAAAGGAACTCAATGTGAGCTCATCACTAACAAATATGGTTTGGTTCACGTTGCTGC CGGAGATTTGCTCAGGGCAGAAATTGCCACCGGAAGTCAAAACGGACAGCGTGCAAAAGACTACATGGAGAAGGGACAGT TGGTCCCTGATGAAATTGTTGTCATGATGGTGAAGGAACGTCTCTTGAAGCCAGACTCTATACACAAGGGTTGGCTTTTG GATGGTTATCCCAGGAGCTTATCACAAGCTACTGCACTTAAGCAATTTGGCTTTCAACCTGATATTTTCATTCTTCTAGA GGTTTCTGAAGATATTCTTGTCGAGAGAGTAGTTGGGCGCAGATTAGATCCTGTTACTGGTAAGATATATCATTTGAAGT ATTCTCCTCCAGAGACAAAAGAAATTGCAGAGAGGCTAACCCAACGTTTTGATGATACTGAAGAAAAGGTAAAGTTGCGA TTGAACACCCATCATCAAAATGTGGAGGCAGTGCTTTCCATTTATAAAGACATAACGGTTAAGATTGATGGAAATGCCTC CAAGGAGGAAGTATTTGTTCAAATTGATGGTGCACTCACACGTCTTTTAGAGCAAAGGAAAGCTGCTTCAGGATCAGTGG CAGCATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0555600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNLNTASYSWSGLGICNPIECKARGGSSLPVNRRRRQHPLPSCSVAFGVRLCCDASIRSHSQSTPVKAAAAAEKEALRVM ISGAPASGKGTQCELITNKYGLVHVAAGDLLRAEIATGSQNGQRAKDYMEKGQLVPDEIVVMMVKERLLKPDSIHKGWLL DGYPRSLSQATALKQFGFQPDIFILLEVSEDILVERVVGRRLDPVTGKIYHLKYSPPETKEIAERLTQRFDDTEEKVKLR LNTHHQNVEAVLSIYKDITVKIDGNASKEEVFVQIDGALTRLLEQRKAASGSVAA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23359:SF167
62 288 227 4.4E-100 –
PANTHER
PTHR23359
62 288 227 4.4E-100
IPR000850
Gene3D
G3DSA:3.40.50.300
74 292 219 1.2E-82 –
Hamap
MF_00235
77 280 204 41.353
IPR000850
CDD
cd01428
78 271 194 4.99129E-81
IPR000850
SUPERFAMILY
SSF52540
78 282 205 7.54E-35
IPR027417
TIGRFAM
TIGR01351
78 278 201 6.5E-66
IPR006259
PRINTS
PR00094
80 93 14 4.2E-22
IPR000850
Pfam
PF00406
81 257 177 3.4E-49 –
PRINTS
PR00094
108 122 15 4.2E-22
IPR000850
PRINTS
PR00094
158 174 17 4.2E-22
IPR000850
ProSitePatterns
PS00113
158 169 12 -
IPR033690
PRINTS
PR00094
229 244 16 4.2E-22
IPR000850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004017
Molecular function Adenylate kinase activity Catalysis of the reaction: ATP + AMP = 2 ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006139
Biological process Nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Subterm of
GO:0016776
Molecular function Phosphotransferase activity, phosphate group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).
Subterm of
GO:0019205
Molecular function Nucleobase-containing compound kinase activity Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0555600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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