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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0556700 |
| Transcript ID | LotjaGi3g1v0556700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT1G22610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|I1LNN7|I1LNN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:97448403..97451465) extracted from Lotus japonicus Gifu genome v1.2.
ATCATGAACAAGCTGGTGGTGGAAGTACTTGATGCCAGCGACCTTATGCCAAAAGATGGAGAAGGGTCAGCAAGCCCCTT TGTGGAGGTAGACTTTGATGAGCAACAGCAGAGGACTCAAACCAAACACAAGGACCTCAATCCTTATTGGAATGAGAAGT TTGTCTTCAACATCAATAACCCGAGAGATCTTCCTCACCAGACAATTGAAGTAGTTGTATACAATTACAATGATCAAAAA CCAGGTAACCACAAGAACTTCCTTGGAAGGGTGAGAATTTCAGGTGATTCTGTCCCTTTCTCTGAGTCTCAAGCTACTAT CGAACGCTACCCACTTGACAAAAGGGGTCTATTTTCAAATATCAAAGGAGATATTGCTCTTAGAATTTATGCTGTTCATG ATCCTTCTGCTTATACTGCTCCTTCTCCTCCTCCACAACTACAACCACAAGCCAGTGAAGAATTTGAGCCTCATCCTTAT CCTTATGAGGAGGAGACTCCCTTGCAAGAAATAAACACTAACATAGTAGATGAGGAAAGCATGGTTGGTGATATTGAGAG GAAAAATAAGAAGCACAAGAACAAGAAGAAAGAAAAGGAAGTGAGAACTTTTCACTCCATTGGGACCGAGAAAGCTGCTC CAGCTCCTGCAGCAAGGCCTCCTCAAGCGGCACCAACAGTGGAAATGAGAGCTGATTTTGCAAAAGCAGGGCCACCCAAT GTGATGTTAATGCAGATCCCGAAGCAAAACCCAGAGTATGGATTGGTGGAGACAAGTCCACCCCTTGCAGCTCGTTTGCG CTATAGAGGAGGGAACAAGATGTCAACCACGTATGATATGGTGGAACAGATGCATTACTTGTACGTGAATGTGGTGAAGG CAAGAGATCTTCCAGTGATGGATATCTCAGGAAGCCTTGACCCTTATGTGGAAGTGAAGCTTGGTAACTACAAAGGGGTT ACAAAGCACTTGGATAAGAATCAGAATCCAGTTTGGAAGCAAATCTTTGCCTTCTCAAAGGAGAGATTGCAATCAAATTT GCTTGAAGTGACTGTGAAGGATAAGGACATTGGTAAAGATGATTTTGTGGGTAGAATTATGTTTGATCTCACTGAGGTTC CTCTTCGGGTACCCCCAGATAGCCCGCTGGCTCCTCAATGGTACAGATTGGAGGACAAGAAAGGGCAAAAGATACATCAT GGAGAAATCATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAGTCATTTCCAGAGGCCTGGCACTCTGATGCTCATAA CGTTAGTCACTCAAACCTTGCAAATACCCGTTCAAAGGTATATTTCACTCCCAAGCTTTACTATCTTAGAGTTCAAGTGA TTGAAGCTCAAGATCTTGTCCCTTCCAACAAAGGAAGAGCTCCGGATGCTTGTGTTAGAGTAACACTAGGAAATCAGATG AGATACACAAGGACTTCTCAAATGAAAGTCATTAACCCAGTTTGGAACGATGAGCTCATGTTTGTGGCAGCTGAACCTTT TGAGGATTTTATAGTTGTGACAGTTGAGGACAGAGTAGGTCCTGGTCCTAACAATGTTGAGATCTTGGGAAGGGAGATTA TATCAGTCAGAAGTGTTCCTCCCAGGCATGAGAGCAAGCCCCCTGATTCTCGTTGGTACAATTTGCACAGGCCTAGTGCG GTTGGTGAGGAAGAAACAGAGAAAAAGAAGGAGAAATTCTCAAGCAAGATTCACCTCAGAATCTGTCTCGAGGCAGGGTA TCACGTGCTTGATGAGTCCACACATTTTAGCAGTGATCTCCAGCCATCCTCCAAACATTTGAGGAAGAAAAACATTGGAA TTCTCGAACTTGGGATACTGAGTGCCCGGAATTTGCTTCCTATGAAGGGCAAGGAAGGTAGGACTACTGATGCATACTGT GTGGCCAAGTATGGCAACAAATGGGTTCGAACCAGAACTCTGCTTGACACTCTATCCCCTAGATGGAATGAGCAGTATAC ATGGGAAGTGCATGATCCATGTACTGTGATCACAATCGGGGTTTTTGACAATCACCACATCAATGGGAACGGTGACCATA AAGATCAGAGGATTGGAAAGGTGAGAATCCGGTTATCAACTCTTGAAACTGATAGAGTGTATACTCATTATTATCCTCTA CTGGTTCTCCAACCCAATGGCCTGAAGAAGAATGGAGAGCTTCATTTGGCAGTGAAATTCACCTGCACAGCTTGGGTTAA CATGGTAGCACAGTATGGAAGGCCTTTGCTTCCCAAAATGCATTATGCCCAACCCATACCTGTTAGGCACATTGATTGGC TCCGCCACCAGGCCATGCAGATTGTGGCAGCACGGTTGTCAAGAGCCGAGCCACCGCTTAGACAAGAAGCAGTTGAGTAC ATGCTTGATGTGGATTACCATATGTGGAGTCTGAGGAGAAGCAAAGCCAATTTTCACCGGATAATGTCACTCCTCTCAGG TGTTACAGCTGTGTGTAAATGGTTTGACAACATCTGCACTTGGAGAAACCCAGTGACAACCTGCCTTGTTCATGTCTTAT TCTTGATCTTGGTTTGCTACCCAGAACTGATATTGCCCACTATTTTTCTTTACCTGTTTGTAATTGGGATTTGGAATTAC CGGTTCAGGCCAAGGCATCCGCCCCACATGGATGCTAGGCTTTCACAAGCAGAAACCGCCCACCCAGATGAATTGGACGA GGAATTTGACACTTTTCCAACTACAAGACCTGCAGATATTGTGAGAATGAGGTACGACAGAATGCGGAGTGTGGCAGGTA GAGTTCAGACTGTGGTTGGAGATTTGGCAACTCAGGGAGAAAGAGCTCAAGCAATATTAGGTTGGAGAGACTCAAGGGCT ACATCTATCTTCATCATCTTCTCACTGATCTGGGCTGTGTTCATTTACATTACTCCCTTTCAGGTAGTAGCAATTCTAGT AGGCCTCTACATGCTGCGTCATCCTCGGTTTAGGAGCAAGATGCCATCAGTGCCGGTTAATTTCTTCAAGAGATTGCCTT CTAAATCAGACATGCTGCTATGA
CDS sequence (LotjaGi3g1v0556700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAAGCTGGTGGTGGAAGTACTTGATGCCAGCGACCTTATGCCAAAAGATGGAGAAGGGTCAGCAAGCCCCTTTGT GGAGGTAGACTTTGATGAGCAACAGCAGAGGACTCAAACCAAACACAAGGACCTCAATCCTTATTGGAATGAGAAGTTTG TCTTCAACATCAATAACCCGAGAGATCTTCCTCACCAGACAATTGAAGTAGTTGTATACAATTACAATGATCAAAAACCA GGTAACCACAAGAACTTCCTTGGAAGGGTGAGAATTTCAGGTGATTCTGTCCCTTTCTCTGAGTCTCAAGCTACTATCGA ACGCTACCCACTTGACAAAAGGGGTCTATTTTCAAATATCAAAGGAGATATTGCTCTTAGAATTTATGCTGTTCATGATC CTTCTGCTTATACTGCTCCTTCTCCTCCTCCACAACTACAACCACAAGCCAGTGAAGAATTTGAGCCTCATCCTTATCCT TATGAGGAGGAGACTCCCTTGCAAGAAATAAACACTAACATAGTAGATGAGGAAAGCATGGTTGGTGATATTGAGAGGAA AAATAAGAAGCACAAGAACAAGAAGAAAGAAAAGGAAGTGAGAACTTTTCACTCCATTGGGACCGAGAAAGCTGCTCCAG CTCCTGCAGCAAGGCCTCCTCAAGCGGCACCAACAGTGGAAATGAGAGCTGATTTTGCAAAAGCAGGGCCACCCAATGTG ATGTTAATGCAGATCCCGAAGCAAAACCCAGAGTATGGATTGGTGGAGACAAGTCCACCCCTTGCAGCTCGTTTGCGCTA TAGAGGAGGGAACAAGATGTCAACCACGTATGATATGGTGGAACAGATGCATTACTTGTACGTGAATGTGGTGAAGGCAA GAGATCTTCCAGTGATGGATATCTCAGGAAGCCTTGACCCTTATGTGGAAGTGAAGCTTGGTAACTACAAAGGGGTTACA AAGCACTTGGATAAGAATCAGAATCCAGTTTGGAAGCAAATCTTTGCCTTCTCAAAGGAGAGATTGCAATCAAATTTGCT TGAAGTGACTGTGAAGGATAAGGACATTGGTAAAGATGATTTTGTGGGTAGAATTATGTTTGATCTCACTGAGGTTCCTC TTCGGGTACCCCCAGATAGCCCGCTGGCTCCTCAATGGTACAGATTGGAGGACAAGAAAGGGCAAAAGATACATCATGGA GAAATCATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAGTCATTTCCAGAGGCCTGGCACTCTGATGCTCATAACGT TAGTCACTCAAACCTTGCAAATACCCGTTCAAAGGTATATTTCACTCCCAAGCTTTACTATCTTAGAGTTCAAGTGATTG AAGCTCAAGATCTTGTCCCTTCCAACAAAGGAAGAGCTCCGGATGCTTGTGTTAGAGTAACACTAGGAAATCAGATGAGA TACACAAGGACTTCTCAAATGAAAGTCATTAACCCAGTTTGGAACGATGAGCTCATGTTTGTGGCAGCTGAACCTTTTGA GGATTTTATAGTTGTGACAGTTGAGGACAGAGTAGGTCCTGGTCCTAACAATGTTGAGATCTTGGGAAGGGAGATTATAT CAGTCAGAAGTGTTCCTCCCAGGCATGAGAGCAAGCCCCCTGATTCTCGTTGGTACAATTTGCACAGGCCTAGTGCGGTT GGTGAGGAAGAAACAGAGAAAAAGAAGGAGAAATTCTCAAGCAAGATTCACCTCAGAATCTGTCTCGAGGCAGGGTATCA CGTGCTTGATGAGTCCACACATTTTAGCAGTGATCTCCAGCCATCCTCCAAACATTTGAGGAAGAAAAACATTGGAATTC TCGAACTTGGGATACTGAGTGCCCGGAATTTGCTTCCTATGAAGGGCAAGGAAGGTAGGACTACTGATGCATACTGTGTG GCCAAGTATGGCAACAAATGGGTTCGAACCAGAACTCTGCTTGACACTCTATCCCCTAGATGGAATGAGCAGTATACATG GGAAGTGCATGATCCATGTACTGTGATCACAATCGGGGTTTTTGACAATCACCACATCAATGGGAACGGTGACCATAAAG ATCAGAGGATTGGAAAGGTGAGAATCCGGTTATCAACTCTTGAAACTGATAGAGTGTATACTCATTATTATCCTCTACTG GTTCTCCAACCCAATGGCCTGAAGAAGAATGGAGAGCTTCATTTGGCAGTGAAATTCACCTGCACAGCTTGGGTTAACAT GGTAGCACAGTATGGAAGGCCTTTGCTTCCCAAAATGCATTATGCCCAACCCATACCTGTTAGGCACATTGATTGGCTCC GCCACCAGGCCATGCAGATTGTGGCAGCACGGTTGTCAAGAGCCGAGCCACCGCTTAGACAAGAAGCAGTTGAGTACATG CTTGATGTGGATTACCATATGTGGAGTCTGAGGAGAAGCAAAGCCAATTTTCACCGGATAATGTCACTCCTCTCAGGTGT TACAGCTGTGTGTAAATGGTTTGACAACATCTGCACTTGGAGAAACCCAGTGACAACCTGCCTTGTTCATGTCTTATTCT TGATCTTGGTTTGCTACCCAGAACTGATATTGCCCACTATTTTTCTTTACCTGTTTGTAATTGGGATTTGGAATTACCGG TTCAGGCCAAGGCATCCGCCCCACATGGATGCTAGGCTTTCACAAGCAGAAACCGCCCACCCAGATGAATTGGACGAGGA ATTTGACACTTTTCCAACTACAAGACCTGCAGATATTGTGAGAATGAGGTACGACAGAATGCGGAGTGTGGCAGGTAGAG TTCAGACTGTGGTTGGAGATTTGGCAACTCAGGGAGAAAGAGCTCAAGCAATATTAGGTTGGAGAGACTCAAGGGCTACA TCTATCTTCATCATCTTCTCACTGATCTGGGCTGTGTTCATTTACATTACTCCCTTTCAGGTAGTAGCAATTCTAGTAGG CCTCTACATGCTGCGTCATCCTCGGTTTAGGAGCAAGATGCCATCAGTGCCGGTTAATTTCTTCAAGAGATTGCCTTCTA AATCAGACATGCTGCTATGA
Protein sequence (LotjaGi3g1v0556700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKLVVEVLDASDLMPKDGEGSASPFVEVDFDEQQQRTQTKHKDLNPYWNEKFVFNINNPRDLPHQTIEVVVYNYNDQKP GNHKNFLGRVRISGDSVPFSESQATIERYPLDKRGLFSNIKGDIALRIYAVHDPSAYTAPSPPPQLQPQASEEFEPHPYP YEEETPLQEINTNIVDEESMVGDIERKNKKHKNKKKEKEVRTFHSIGTEKAAPAPAARPPQAAPTVEMRADFAKAGPPNV MLMQIPKQNPEYGLVETSPPLAARLRYRGGNKMSTTYDMVEQMHYLYVNVVKARDLPVMDISGSLDPYVEVKLGNYKGVT KHLDKNQNPVWKQIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRIMFDLTEVPLRVPPDSPLAPQWYRLEDKKGQKIHHG EIMLAVWMGTQADESFPEAWHSDAHNVSHSNLANTRSKVYFTPKLYYLRVQVIEAQDLVPSNKGRAPDACVRVTLGNQMR YTRTSQMKVINPVWNDELMFVAAEPFEDFIVVTVEDRVGPGPNNVEILGREIISVRSVPPRHESKPPDSRWYNLHRPSAV GEEETEKKKEKFSSKIHLRICLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILELGILSARNLLPMKGKEGRTTDAYCV AKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITIGVFDNHHINGNGDHKDQRIGKVRIRLSTLETDRVYTHYYPLL VLQPNGLKKNGELHLAVKFTCTAWVNMVAQYGRPLLPKMHYAQPIPVRHIDWLRHQAMQIVAARLSRAEPPLRQEAVEYM LDVDYHMWSLRRSKANFHRIMSLLSGVTAVCKWFDNICTWRNPVTTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYR FRPRHPPHMDARLSQAETAHPDELDEEFDTFPTTRPADIVRMRYDRMRSVAGRVQTVVGDLATQGERAQAILGWRDSRAT SIFIIFSLIWAVFIYITPFQVVAILVGLYMLRHPRFRSKMPSVPVNFFKRLPSKSDMLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 91 | 91 | 17.146 | ||
| Phobius | 1 | 850 | 850 | - | – | |
| Gene3D | 1 | 133 | 133 | 3.5E-28 | ||
| PANTHER | 3 | 1019 | 1017 | 0.0 | – | |
| SMART | 3 | 111 | 109 | 1.3E-16 | ||
| PANTHER | 3 | 1019 | 1017 | 0.0 | – | |
| Pfam | 3 | 101 | 99 | 5.3E-20 | ||
| CDD | 3 | 129 | 127 | 2.72376E-60 | – | |
| SUPERFAMILY | 3 | 132 | 130 | 3.27E-25 | – | |
| MobiDBLite | 136 | 155 | 20 | - | – | |
| Coils | 181 | 201 | 21 | - | – | |
| Gene3D | 279 | 432 | 154 | 1.4E-30 | ||
| CDD | 285 | 410 | 126 | 1.95834E-65 | – | |
| Pfam | 285 | 387 | 103 | 1.3E-21 | ||
| SMART | 285 | 381 | 97 | 2.6E-17 | ||
| SUPERFAMILY | 285 | 424 | 140 | 5.41E-34 | – | |
| ProSiteProfiles | 286 | 366 | 81 | 16.095 | ||
| Gene3D | 433 | 583 | 151 | 2.6E-17 | ||
| SUPERFAMILY | 446 | 603 | 158 | 3.42E-26 | – | |
| SMART | 447 | 547 | 101 | 2.2E-11 | ||
| Pfam | 447 | 554 | 108 | 2.4E-14 | ||
| CDD | 447 | 601 | 155 | 6.48299E-66 | – | |
| ProSiteProfiles | 448 | 532 | 85 | 11.581 | ||
| Gene3D | 595 | 741 | 147 | 2.1E-27 | ||
| Pfam | 612 | 719 | 108 | 2.7E-24 | ||
| SUPERFAMILY | 612 | 745 | 134 | 1.04E-28 | – | |
| SMART | 613 | 716 | 104 | 2.8E-16 | ||
| CDD | 613 | 736 | 124 | 1.41451E-62 | – | |
| ProSiteProfiles | 614 | 701 | 88 | 10.59 | ||
| Phobius | 851 | 879 | 29 | - | – | |
| TMHMM | 852 | 874 | 23 | - | – | |
| Pfam | 864 | 1019 | 156 | 4.4E-78 | ||
| Phobius | 880 | 961 | 82 | - | – | |
| TMHMM | 962 | 984 | 23 | - | – | |
| Phobius | 962 | 991 | 30 | - | – | |
| Phobius | 992 | 1019 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0556700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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