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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0004200 |
| Transcript ID | LotjaGi4g1v0004200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT5G59810.1 Subtilase family protein; Swiss-Prot: sp|F4JXC5|SBT54_ARATH Subtilisin-like protease SBT5.4; TrEMBL-Plants: tr|A0A072V3H2|A0A072V3H2_MEDTR Subtilisin-like serine protease; Found in the gene: LotjaGi4g1v0004200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:721839..724792) extracted from Lotus japonicus Gifu genome v1.2.
TTTGACAATTGATTAGGAAGCTCATAGGAGCAAGGTACTTCAACAAAGGTTATGCAGCCAATGCAGGGCCAGCAGCATTG ACAAACATTACACTTAACACTGCAAGAGACTATGAAGGTCATGGATCTCACACGCTATCGACTTTGGGAGGAAACTTTGT TCGTGATGCAAGTGTCTTTGGCTTGGGTAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGGTTGCCGCTTACAAGG TGTGCTGGCCACCATTAGTTGATGGCGGCGGTGGGTGTTTTGATGCAGATATCTTGGCAGCATTTGACATGGCTATCCAT GATGGTGTTGATGTTCTGTCCCTCTCTCTTGGAGACACTCCTTCTGATTACTTTGATGATGGTGTTTCAATTGGAGCATT TCATGCTGTGAACAAGGGCATCACTGTGTTGTGCTCAGCTGGGAACTCTGGACCAATACCAGGAACTGTTACAAATAATG CACCTTGGATATTAACAGTCGCTGCAAGCACCTTGGATAGAGAGATTGATACTGTTGTTGAACTCCAGAATGGACACCAA TTCAGGGTATGTTTCTTTCCATCTATCCATTGTCCAATTTTTCTTCACAAAAGTCAATCTTTATCCATGATAAAGATCAT TGATAAGGTCAATTTTGTTACAAGTAAAATATAAGATTATTCATGTATATATACAAGTTAAGCTTTTGGGATAGTTGATT CATAACACTCGTATCAGATCCTTAAATAGGAACTTGCGGGGAAATATAATTTAAGATCATTTATGTGTCTCATCCAAGAT CTTAAACTTCTGTGATAGTTTATTCATACCAATTTTTTCTCTTTTTTTCTCCACTTCCACTGTCTGATCTAATATTTCAT TCTTGAATATCAGGGAGCAAGCCTTTCTGAAGCTTTGCCAGAAGACAAGCTTTACCCTCTCATTAGTGCTGCACAAGCAA AAGTAGCAAACGCATCAGTTGAAAATGCGTATGAATTGCTTGCAGTTTATTTTGTTTGAATATCTCATTTAATGAAGTGT TAAAACTTTTCCACTGATTTATTATATTAAGTGATTTTGAATGAACAACATGGTAACATAACATGCGTGCCCTTTGTGTA GTACTCTCTGTATGGTTGGATCAATTGACCCACGGAAGGTGAAGGGCCAAATATTGGTTTGTCTGAGAGGTATATCTCCA AGAGTGGAAAAGAGCCTTGTTGCTTTTGAGGCTGGTGCAGCAGGAATGATTCTTTGCAATGATGAGCTTAGTGGTAATGA GCTCATTGCTGATCCTCATTTCCTGCCTTCATCCCAAATCAGTTATGAAGATGGTCTTGTTGTCTTTGCCTACATCAATT CAACCAAGTAACTCTTTTTGCTCTCTCATAAGCATTTATCTGATAATGTGTGTATTGCTCCCTCAACATCTTTAATGGGG ATATCATATAACAGGAATCCACTAGGATATATTCATCCACCCACAACCAAGTTGCAAATAAAGCCTGCTCCATCCATGGC AAGCTTCTCTTCTAGAGGCCCCAACACAATCACACCAGAGATCCTCAAGGTTTGCCTTTCCATCCATTATTGCTTTGAAA TATTGTGTTTAATTTATTTGCTCTATTGCAACTCATGAGTCGCTTTTTCTGTTTTGTTTCTTTGTATAACAAGGATTTTA TTCTTTCAAATGCTCCATACTAATTTGTGGTTTTTGATGAATTCATGGTTTCTTGTTTTTGACGTGTTCAGCCTGATATC ACTGCTCCTGGTGTGAACATCATTGCTGCATACACAGGAGCGGCTAGCCCGACAGAGTTGGATTATGATACGCGTAGGGT TCCTTTTATCACCATGTCCGGAACATCCATGTCCTGCCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACCCTCCACC CTCACTGGAGTCCATCAGCTATTAAGTCTGCAATAATGACAACTGGTAACAGCTTTATCTCGGATTCAAGTCTTGTGTAT TGAAAGAAAAAAATTGCTAGGAGAACTAGAACCACCTGGACGTGGATATTACTGGCTCAAACAAGATTGCATCTTGTAGA GTATACCTGTGCTCAAACTAAAAAATATCGTACATAGTAGTACTTTTGGTGCATCTAAGCATGTTTCCTAGTTTTTGTGT TTGGTTGTTACACTACATATGACTACAATTTTTGTTTTGGTGTATGTTGTATTTCAGCTAGGATAAGGGACAACACTGGA AAGCCAATTCTTGATGGCAATAATGCAAAGGCAACACCATTTGCATATGGCTCTGGTCACATTAGACCAAACCGTGCCAT GGATCCTGGCTTGGTCTATGACTTAACCATCAATGATTACCTGAACTTCCTTTGTTATCGTGGTTATAACCAGACACAGA TAAAGATGTTCTATGGTACTCCTCATCACTGTCCTGATAGAATCAACATCCTGGATTTCAACTACCCTACCATAACAATA CCAAAAATTTATAGCCCAATTACATTGACCAGAAAGCTGAAAAATGTTGGTGCACCAGGGAATTACACTGCTAGCCTCCG TGTACCTGCAGGCCTAGCAATATCTGTGGAGCCTAATGTCTTGAAATTTGACAAGATTGATGAAGAGAAGAGCTTCAAGT TGAGTGTTGAAGTTACAAGACCAGGTGCGGCTACAGTGTTTGGAGGGTTAACTTGGTCAGATGGTAAACACTATGTTAGG AGTCCAATTGTAGTTGGAGGTGTTAGAGGTTAGGTCATTAGATGTGGATTAATTGGAAGCAACTAGGGATGAGAATTTTT TATTTTTTATTTTTATTGTTGAGAGATTGGGAAAAAGATAAGTAAGTGCATGGCTTGGAGATGTTGATTTTGTAATTTTC TTCTTATTAGACATAAATTCCTGCTCAGGAAATTGTAATTTGTGATTTTTGGTCCTTTTACTTTGGACTACGAG
CDS sequence (LotjaGi4g1v0004200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATCCATGATGGTGTTGATGTTCTGTCCCTCTCTCTTGGAGACACTCCTTCTGATTACTTTGATGATGGTGTTTC AATTGGAGCATTTCATGCTGTGAACAAGGGCATCACTGTGTTGTGCTCAGCTGGGAACTCTGGACCAATACCAGGAACTG TTACAAATAATGCACCTTGGATATTAACAGTCGCTGCAAGCACCTTGGATAGAGAGATTGATACTGTTGTTGAACTCCAG AATGGACACCAATTCAGGGGAGCAAGCCTTTCTGAAGCTTTGCCAGAAGACAAGCTTTACCCTCTCATTAGTGCTGCACA AGCAAAAGTAGCAAACGCATCAGTTGAAAATGCTACTCTCTGTATGGTTGGATCAATTGACCCACGGAAGGTGAAGGGCC AAATATTGGTTTGTCTGAGAGGTATATCTCCAAGAGTGGAAAAGAGCCTTGTTGCTTTTGAGGCTGGTGCAGCAGGAATG ATTCTTTGCAATGATGAGCTTAGTGGTAATGAGCTCATTGCTGATCCTCATTTCCTGCCTTCATCCCAAATCAGTTATGA AGATGGTCTTGTTGTCTTTGCCTACATCAATTCAACCAAGAATCCACTAGGATATATTCATCCACCCACAACCAAGTTGC AAATAAAGCCTGCTCCATCCATGGCAAGCTTCTCTTCTAGAGGCCCCAACACAATCACACCAGAGATCCTCAAGCCTGAT ATCACTGCTCCTGGTGTGAACATCATTGCTGCATACACAGGAGCGGCTAGCCCGACAGAGTTGGATTATGATACGCGTAG GGTTCCTTTTATCACCATGTCCGGAACATCCATGTCCTGCCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACCCTCC ACCCTCACTGGAGTCCATCAGCTATTAAGTCTGCAATAATGACAACTGCTAGGATAAGGGACAACACTGGAAAGCCAATT CTTGATGGCAATAATGCAAAGGCAACACCATTTGCATATGGCTCTGGTCACATTAGACCAAACCGTGCCATGGATCCTGG CTTGGTCTATGACTTAACCATCAATGATTACCTGAACTTCCTTTGTTATCGTGGTTATAACCAGACACAGATAAAGATGT TCTATGGTACTCCTCATCACTGTCCTGATAGAATCAACATCCTGGATTTCAACTACCCTACCATAACAATACCAAAAATT TATAGCCCAATTACATTGACCAGAAAGCTGAAAAATGTTGGTGCACCAGGGAATTACACTGCTAGCCTCCGTGTACCTGC AGGCCTAGCAATATCTGTGGAGCCTAATGTCTTGAAATTTGACAAGATTGATGAAGAGAAGAGCTTCAAGTTGAGTGTTG AAGTTACAAGACCAGGTGCGGCTACAGTGTTTGGAGGGTTAACTTGGTCAGATGGTAAACACTATGTTAGGAGTCCAATT GTAGTTGGAGGTGTTAGAGGTTAG
Protein sequence (LotjaGi4g1v0004200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIHDGVDVLSLSLGDTPSDYFDDGVSIGAFHAVNKGITVLCSAGNSGPIPGTVTNNAPWILTVAASTLDREIDTVVELQ NGHQFRGASLSEALPEDKLYPLISAAQAKVANASVENATLCMVGSIDPRKVKGQILVCLRGISPRVEKSLVAFEAGAAGM ILCNDELSGNELIADPHFLPSSQISYEDGLVVFAYINSTKNPLGYIHPPTTKLQIKPAPSMASFSSRGPNTITPEILKPD ITAPGVNIIAAYTGAASPTELDYDTRRVPFITMSGTSMSCPHVAGVVGLLKTLHPHWSPSAIKSAIMTTARIRDNTGKPI LDGNNAKATPFAYGSGHIRPNRAMDPGLVYDLTINDYLNFLCYRGYNQTQIKMFYGTPHHCPDRINILDFNYPTITIPKI YSPITLTRKLKNVGAPGNYTASLRVPAGLAISVEPNVLKFDKIDEEKSFKLSVEVTRPGAATVFGGLTWSDGKHYVRSPI VVGGVRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 344 | 344 | 21.419 | – | |
| PANTHER | 1 | 484 | 484 | 2.0E-231 | – | |
| PANTHER | 1 | 484 | 484 | 2.0E-231 | – | |
| Pfam | 1 | 336 | 336 | 4.9E-35 | ||
| SUPERFAMILY | 2 | 348 | 347 | 6.94E-52 | ||
| Gene3D | 2 | 358 | 357 | 1.5E-123 | ||
| Gene3D | 70 | 213 | 144 | 1.5E-123 | – | |
| CDD | 76 | 206 | 131 | 7.73558E-34 | – | |
| Pfam | 114 | 190 | 77 | 7.7E-11 | ||
| SUPERFAMILY | 128 | 199 | 72 | 2.22E-7 | – | |
| ProSitePatterns | 275 | 285 | 11 | - | ||
| Gene3D | 361 | 484 | 124 | 8.2E-32 | – | |
| Pfam | 389 | 482 | 94 | 1.6E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi4g1v0004200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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