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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0016700 |
| Transcript ID | LotjaGi4g1v0016700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|I1KRN5|I1KRN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2146491..2152020) extracted from Lotus japonicus Gifu genome v1.2.
AAGATATTGAAAAATGGGGTTTGCTTCATCTCATTGCTCACCTTCAACAAGTTGAGTCTCTCTGACACTCCTTCACCACG CACACCCATGACTTTCAGTTGATTGATTTTGCAAGTTACAAAAAGAAGCAAATTGCGGCGATTCTTTAGCATTTCGAGGA ATTTTGTTTTGTTTTGTTTCTTCTTTATCATCATCCATAAATTCCAACATCATCTCTCGCTCAAGCTTCTCAACAACACA CACAGAGAGTTATGGGTTCTGTAGAGAATGATTCATCGGTTGTGGAAGTTGAAGAGCCTCTTCTTCAGGTTACCTCTTTT CTTTCTTTTTTTCTTTCTTTGATTTTTATCCACAAATTTTTTGTGATTTTTAAAAATATGAAATTTGGTGTCTTTATTGA ATCAGTGAGCTTGTTAGAGCAGTTTGACTTGGCCCAGATTCTCAAAATCTCAAATTTATTGTTGAAATCCATATGGGTCA ATCATCAACCCTGTTTTCTGTAGGTTTTTTGTTGCATCAGATGTGGCTTGATTGTTGTTAATGGTAGTTGGCAGATGTAG AAGTAGAACAAAATTAGGTGGAGTTTCCCATGGTTGAAAATGTGTAGAAGTTGAATAAAGTGGTAACTCAAAACAAATTG AAGTCACTCTGCACACTGAAACTTCTATTGATTTCACTGTTGTTAATCTGTTCATATGTTTTATCCTATTCATGTTGTTA TTCCCTTTTGGCCTAAAGATTATGTTACTTGATTTGGTAAAAAATACTCAAAGCTGAATCTAGACACTATGACACTTTTG GTGTGAACTTACCATTGGTTGTTAAACATCAAATGTTGAAATCTTCGAGATTTGTTAAAAAAATACCTTTCATGTTGTTA TTTGAGTGTTCATGTAGTGGTATTTTGCTTTATGATGAACAATTGGTTATTTTTTATCTGCAGGATGAAGAGAGCAAACG ATACACAGGAGATGGCTCAGTTGACTTTAAAGGGAGACCTGTTCTTAAGCAGAATACTGGCACTTGGAAAGCTTGCCCAT TTATCCTAGGTAACCCTTTTTCATTTCTCTTATTACCAAATATATCTTTTTCTTAATTGCATTTTTTATAATATGAATCG CAGGCAATGAATGCTGTGAACGTTTGGCATACTATGGAATTGCAACAAATCTTGTTACCTATCTTACCCAAAAACTACAC CAAGGGAATGTCGCTGCTGCAAGAAATGTCACCACTTGGCAAGGCACATGTTATCTTGCACCTCTCATTGGAGCTATTCT AGCAGATTCTTGCTGGGGACGATACTGGACTATTGCAGTTTTCTCCACGATTTATTTTCTAGTAATTTCAAACTAACATA GCTTTATTCTCCTTTTCAAAGAATTTTTAAACACATCTGTTTCTTGATATACTGCTTTAAATGTCCTACACAATTTCCTA CAGAGCTAAGCAAAATACATACTTGCAGCATGCAAGGTTTCACCTTTGCATTAGTATGCTTTACTTCCCGTTTTGGATAG GGACCAAAAAACACTTATTGCAGCATCTCTACTAAAAAGTTCACTAAATAAGCTCCAATAAGTGCACTCTGGTCTGCATC GAAACGGGCTCTTATACAGTATTCTGCATAATAGTAATTTGTGATGGCGATAGGCTCTTATTGAGCCATTCCCATGTCTT GTATATTTGTGGACTATAAAGTCTTTTATACATTTCGTAAGTTTGTAGTAATTGAGTAATTGACTAGAAAATAGTGAAGG ATAAGGAAGAAGTCATCTGTTAGACTATTAAAAACATTTGGAAAAGGGACTGTGTGAAGACCAGTTTTAAGTGTACCATG ATCCAAACTTGTTCCTTCCATTGCACTATGTTATCTACTGTATATTGAAGTTTCTTAGAATGGAAGTGAAAAATTCTTTT GATGGTTTCCACTTGAGTACTTAATATAAGGCATTCTTACATATCAAAAGCTATAGGGTTGATATTAGGAACAATTGGTG TTTGTCTAGTATTCTTTGTCGTCATTTTGTATTATGTGCATCCCTTGCTTCTACATGCTTTTTTATTCGATTCTCTTTAC ATGTTTTAATAGCACTGTGGCTGTTTCATGCAGGGGATGTGTACATTGACTCTTTCTGCATCTGTTCCAGCATTGAAACC TGCTGAGTGTTTTGGTCCTGTATGCCCTCCAGCTACTCCTGCTCAATATGCTGTGTTCTTCTTTGGTCTCTACCTGATTG CACTTGGGACTGGTGGTATTAAACCATGTGTCTCATCTTTTGGGGCAGATCAGTTTGATGATACTGATCCCCAGGAAAGG ATTAAGAAGGGATCCTTTTTCAACTGGTTTTATTTTTCCATCAACATAGGTGCTGTAGTATCAAGCACTTTTGTTGTATG GGTTCAAGAAAATATGGGCTGGGGTCTTGGATTTGGCATTCCTGCTATATTTATGGCATTAGCTATTGGAAGCTTTTTCA TAGGCACGCCCCTCTACAGGTTTCAAAAGCCAGGGGGAAGTCCTATTACAAGAATGTTGCAGGTTGTGGTAGCATCTTTC CGGAAGCGGAATGTGGTTGTCCCTGAGGATAGTAGTCTCCTGTTTGAGACACCGGACAAGAGCTCTGCAATTGAAGGAAG CCGAAAACTGGAGCATAGTGACGAACTTAGGTAAATGTTTTGTTTATTTTGGATTATCGCTGTAGTATTATTTAGCTTTC ATCGAAATACAGGAAAATGAGTTTCTTATCATGATTGTTAGCCTATTCCTAATATTCTTTTTAAACTGTAATTTGTTTTC TTAGTTCCTACCAAATTCAATTTTTAGGGTAGTGTAGCTTGGTATGAGCCCCCAATCTAATGTTATAGAATAAAGTTGTA TATTTTAGGGTTTGACTGGCTACTTACAGCTTGGATGGACCTTATGGCCTTGTCTGTGACACCAGATAACGCTTGACAGG AGAGAATAACTAGTATTTTCAACCCTTATCCAGTGTTTAGTGTGCATAGTAGATAGCAGAACAAAACTATCTGGTCACGT ACTCTCATCAGCTGATTTTAGTATGGCTGGCGCTATTGAGCAATGACACCCTTCCTGTAACCCTTGTTGCACCTATTTTT CTGCTCTAGGAGTCACCTTTGTTATTACCCATGAACTTCCATCCTCTGATTAGACACAATATCTGTCACAATCATCTAAG TTGGAGTACCTTTTAGAGAGAATAGAATGAATAGATTGGCAATTTGCAACCTCTGTCAAGTCTTTATGTCTCTATTGCAC TTATATATATATATATATATATATATATATATTCTTATCCCAAATTTCTGTGGATCTTTATATTTTCCAACTTCCAGGTG CAGATTTCAATCTAACTTAAACTATCATCTGCTTTGAATTTTCCTGCAAATTCAGCAAGAAAAATTTGTTTTCGAATGTT ACTGGAACCCTGGATAAGATAAGATCATTTAATGGTATAATTGTCACCCAAACCAGATAAGACTGTATGTATGAATTGAA TTGGTTTAGTGATCGACACAATGTGTAGGGAAAGTTTTACTTCTTTTCACTTCACTTTGCCTATAAATTTGTGCAGCGTA AGCATTTGATATGGAAGCATATAAGTTGACAACTGATTACTGGTTGCTTAATTAGTTAGTGTCCTCATTTTGTTGCTTAA CTATTCATGATTAGACACTCATATATGAACATTTTAGATTTTTCATTCATGGCTCAACGTTACTCATAGTTAGGTTTATG TATTTGCTTATGCTCTTATGGATATCATAAAGAGTTTACTTGTGAAATATAATGATTTGTTTTTTCTTCAAGAGCGATGA GAAATATCACACTGTTGTCGGCTATTTCTTTTCACTGGGCTAATCGTAAATTCATTGTTTTTTGCTTCTCCTTTCGCTTT TCATATGAATATATCGTCTTTAATAGTTTTGTAGGATAGTTTGCAGGTAAACAGTTTCTTTTAGAAAGTCTATAGTAAGT TGTAAAGTCCTCTGCTAAAAAATTATTTTTGTCTTAATAGTAATTTGTTCTGTTATTGATAATGGCTCAAGTATCCTTAC CCTACTTCAAAAACTTCTAATTTTTTTTGTATAATATGTCATCTATTAATGGGGCTTCGTGCGCTCTACTAAAACTCATT ACTTTTGTTTTAATGAAGGTGTCTTGATAGAGCAGCTGTAGTGTCTGATGCTGAGAATAAAAGTGGCAATTATTCTAACC TCTGGAGACTTTGCACAGTGACACAGGTGGAGGAATTAAAAATCTTGATCCGCATGTTTCCAATTTGGGCTACTGGAATA GTTTTCTCTGCTGTTTATGCCCAGATGTCAACTTTGTTTGTGGAACAAGGAACCATGATGAACACACATATTGGTTCCTT TAATATTCCTCCAGCTTCCCTCTCAAGTTTTGATGTGATAAGTGTTATTTTCTGGGTGCCCGTGTACGATAGGTTCATAG TTCCCATTGCAAGGAAATTTACCGGCAAGGGAAGGGGCTTTTCAGAGTTGCAAAGAATGGGAATTGGACTTTTTATTTCA GTCCTGTGTATGTCAGCAGCTGCTATTGTCGAGATTGTGCGCTTGCAGCTTGCAAGAGAGCATGGCCTTGTTGATAAACC TGTGCCGGTTCCCCTCAACATATTTTGGCAAGCTCCTCAGTATTTCTTATTGGGGGCTGCAGAGGTATTTACATTCGTGG GGCAGCTTGAGTTCTTCTATGACCAATCACCAGATGCTATGCGCAGTTTATGCAGTGCTTTGTCACTTCTCACCACTTCA TTGGGGAATTACTTGAGCTCTTTCATTCTCACCCTAGTAACTTACGTCACTACACGAGGTGGAAATCCTGGGTGGATTCC AGATAACTTGAACAAAGGTCATCTAGATTACTTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAACATGTTGGTGTACA TAACTGCTGCCAAAAGGTACAAGCAGAAGAAGGCTTCTTAAGATTTTTCAGGCATTTTGTTTGGGTAGAATAGAACCACT TTGTGATCTTTACTTCTGCTATTTGTGATTGTTCTGTGTATGTGAATAAAGATGTTCTGTAATTACACGCTCTTCTTTCA CCTACAAATGAAAATCTGTGTTATGCCTGGTTCAATATCCTCTCTTGAAGCTGAGTTATGAGATTGTTTGCTACTCATTC ATGTCAGTTGTCGGTAGTTAATGTTCACTTTCTCTACATTTAAACCATTACATTTTTAACTTTTGACATAGAAAATGTTG ATGCCACTTTTTGGTGATTCATCGTTTACATTAGTAGTGTTTTGATCAATGGGAACAAAAAGCAAGGAGAATGAACTGCA GGGACAAATGTTGCATTAGCTCGTTACTACATCAGTCAGAGCATTTTTTCTGCTAAAAGCATGAGCTTGAAAGCACGGTA GAAATTATAAAGCATATGAATTGGTGCTATGTTAAGAGAAATTTTAGCAACACAAACAATAAGTTCTTTTTTTGAAAAAA ACAATACAAC
CDS sequence (LotjaGi4g1v0016700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTGTAGAGAATGATTCATCGGTTGTGGAAGTTGAAGAGCCTCTTCTTCAGGATGAAGAGAGCAAACGATACAC AGGAGATGGCTCAGTTGACTTTAAAGGGAGACCTGTTCTTAAGCAGAATACTGGCACTTGGAAAGCTTGCCCATTTATCC TAGGCAATGAATGCTGTGAACGTTTGGCATACTATGGAATTGCAACAAATCTTGTTACCTATCTTACCCAAAAACTACAC CAAGGGAATGTCGCTGCTGCAAGAAATGTCACCACTTGGCAAGGCACATGTTATCTTGCACCTCTCATTGGAGCTATTCT AGCAGATTCTTGCTGGGGACGATACTGGACTATTGCAGTTTTCTCCACGATTTATTTTCTAGGGATGTGTACATTGACTC TTTCTGCATCTGTTCCAGCATTGAAACCTGCTGAGTGTTTTGGTCCTGTATGCCCTCCAGCTACTCCTGCTCAATATGCT GTGTTCTTCTTTGGTCTCTACCTGATTGCACTTGGGACTGGTGGTATTAAACCATGTGTCTCATCTTTTGGGGCAGATCA GTTTGATGATACTGATCCCCAGGAAAGGATTAAGAAGGGATCCTTTTTCAACTGGTTTTATTTTTCCATCAACATAGGTG CTGTAGTATCAAGCACTTTTGTTGTATGGGTTCAAGAAAATATGGGCTGGGGTCTTGGATTTGGCATTCCTGCTATATTT ATGGCATTAGCTATTGGAAGCTTTTTCATAGGCACGCCCCTCTACAGGTTTCAAAAGCCAGGGGGAAGTCCTATTACAAG AATGTTGCAGGTTGTGGTAGCATCTTTCCGGAAGCGGAATGTGGTTGTCCCTGAGGATAGTAGTCTCCTGTTTGAGACAC CGGACAAGAGCTCTGCAATTGAAGGAAGCCGAAAACTGGAGCATAGTGACGAACTTAGGTGTCTTGATAGAGCAGCTGTA GTGTCTGATGCTGAGAATAAAAGTGGCAATTATTCTAACCTCTGGAGACTTTGCACAGTGACACAGGTGGAGGAATTAAA AATCTTGATCCGCATGTTTCCAATTTGGGCTACTGGAATAGTTTTCTCTGCTGTTTATGCCCAGATGTCAACTTTGTTTG TGGAACAAGGAACCATGATGAACACACATATTGGTTCCTTTAATATTCCTCCAGCTTCCCTCTCAAGTTTTGATGTGATA AGTGTTATTTTCTGGGTGCCCGTGTACGATAGGTTCATAGTTCCCATTGCAAGGAAATTTACCGGCAAGGGAAGGGGCTT TTCAGAGTTGCAAAGAATGGGAATTGGACTTTTTATTTCAGTCCTGTGTATGTCAGCAGCTGCTATTGTCGAGATTGTGC GCTTGCAGCTTGCAAGAGAGCATGGCCTTGTTGATAAACCTGTGCCGGTTCCCCTCAACATATTTTGGCAAGCTCCTCAG TATTTCTTATTGGGGGCTGCAGAGGTATTTACATTCGTGGGGCAGCTTGAGTTCTTCTATGACCAATCACCAGATGCTAT GCGCAGTTTATGCAGTGCTTTGTCACTTCTCACCACTTCATTGGGGAATTACTTGAGCTCTTTCATTCTCACCCTAGTAA CTTACGTCACTACACGAGGTGGAAATCCTGGGTGGATTCCAGATAACTTGAACAAAGGTCATCTAGATTACTTTTTCTGG CTTTTAGCTGGACTTAGCTTCTTAAACATGTTGGTGTACATAACTGCTGCCAAAAGGTACAAGCAGAAGAAGGCTTCTTA A
Protein sequence (LotjaGi4g1v0016700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSVENDSSVVEVEEPLLQDEESKRYTGDGSVDFKGRPVLKQNTGTWKACPFILGNECCERLAYYGIATNLVTYLTQKLH QGNVAAARNVTTWQGTCYLAPLIGAILADSCWGRYWTIAVFSTIYFLGMCTLTLSASVPALKPAECFGPVCPPATPAQYA VFFFGLYLIALGTGGIKPCVSSFGADQFDDTDPQERIKKGSFFNWFYFSINIGAVVSSTFVVWVQENMGWGLGFGIPAIF MALAIGSFFIGTPLYRFQKPGGSPITRMLQVVVASFRKRNVVVPEDSSLLFETPDKSSAIEGSRKLEHSDELRCLDRAAV VSDAENKSGNYSNLWRLCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGTMMNTHIGSFNIPPASLSSFDVI SVIFWVPVYDRFIVPIARKFTGKGRGFSELQRMGIGLFISVLCMSAAAIVEIVRLQLAREHGLVDKPVPVPLNIFWQAPQ YFLLGAAEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTSLGNYLSSFILTLVTYVTTRGGNPGWIPDNLNKGHLDYFFW LLAGLSFLNMLVYITAAKRYKQKKAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 114 | 114 | - | – | |
| PANTHER | 19 | 585 | 567 | 4.8E-302 | – | |
| PANTHER | 19 | 585 | 567 | 4.8E-302 | ||
| SUPERFAMILY | 42 | 584 | 543 | 6.67E-30 | ||
| CDD | 47 | 581 | 535 | 0.0 | – | |
| Pfam | 115 | 545 | 431 | 1.9E-135 | ||
| Phobius | 115 | 137 | 23 | - | – | |
| TMHMM | 117 | 139 | 23 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| Phobius | 157 | 176 | 20 | - | – | |
| TMHMM | 159 | 181 | 23 | - | – | |
| Phobius | 177 | 204 | 28 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| Phobius | 205 | 224 | 20 | - | – | |
| Phobius | 225 | 229 | 5 | - | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| Phobius | 230 | 250 | 21 | - | – | |
| Phobius | 251 | 352 | 102 | - | – | |
| TMHMM | 352 | 374 | 23 | - | – | |
| Phobius | 353 | 374 | 22 | - | – | |
| Phobius | 375 | 393 | 19 | - | – | |
| TMHMM | 394 | 416 | 23 | - | – | |
| Phobius | 394 | 414 | 21 | - | – | |
| Phobius | 415 | 434 | 20 | - | – | |
| Phobius | 435 | 458 | 24 | - | – | |
| TMHMM | 436 | 458 | 23 | - | – | |
| Phobius | 459 | 477 | 19 | - | – | |
| Phobius | 478 | 500 | 23 | - | – | |
| TMHMM | 478 | 500 | 23 | - | – | |
| Phobius | 501 | 511 | 11 | - | – | |
| Phobius | 512 | 537 | 26 | - | – | |
| TMHMM | 513 | 535 | 23 | - | – | |
| Phobius | 538 | 556 | 19 | - | – | |
| TMHMM | 555 | 577 | 23 | - | – | |
| Phobius | 557 | 576 | 20 | - | – | |
| Phobius | 577 | 586 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0016700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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