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LotjaGi4g1v0023100.1

Overview

Field Value
Gene ID LotjaGi4g1v0023100
Transcript ID LotjaGi4g1v0023100.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Urease accessory protein UreG; TAIR: AT2G34470.2 urease accessory protein G; Swiss-Prot: sp|O64700|UREG_ARATH Urease accessory protein G; TrEMBL-Plants: tr|I3SUK1|I3SUK1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0023100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:2873424..2878726) extracted from Lotus japonicus Gifu genome v1.2.

GATTAATTAATTGAAACCAAATCATCGTTTTTTTCGCACCAAGTATAGCTCAAGTCAACAAAACATTTTCATGATAAGCT TAAGTGATAACTGTAGTGTAGTGTGACATTCTCATTTTCCTTCCACTATAGTATACAGTTTCAGTTCAGTAACAAACCTC CATTTCAATGGCTTCTGCAGGTGACCACAACCACGAACACCATCACCACCACCATCATAGTGACCATGGCCATGACCATG ATCATCATGATAACTCCCACTCTCACTCCGATGGAGTTGCATCAGCAGGATCCGATTCATATGTAGGTCCTGATGGGAAG GTGTACCACAGCCACGATGGTCTCGCGCCACACTCTCACGAACCCATTTACTCTCCTGGCTTCTTCACCAGAAGAGCTCC ACCTCTTATCAACAGGGATTTCAATGAAAGAGCTTTCACCATTGGCATCGGTGGACCAGTGGGTACTGGGTATGCTGCTT CGTTTCACAATATTTCATGCCAAGTCTCAGTTTTTAATTAATATAGTAAAGTGGGCATTGATTGATATAGTTTTGTTGGG TTTAACTGTTTTATCAATTCCTATTGAAATATAATGATGTATAGAATGCAAAAGGTGAAAAATTTCTGTTTGTCCTGTTT GTGCTAGCTATCAGCTGAAATTTCATAGTGAAGTTTTGCTACAATTTCAATGTTCTTTGTAGGTAATGGATTTTTTTTTT TTATTTGATGGTTCATGGTTAAACTGTGCAGGAAAACTGCTTTGATGTTGGCCCTTTGTGAATTTTTGCGGGACAATTAC AGTCTTGCTGCGGTGAGTGTCGTTATAAACCTTATTTCTTCCTAAATATTGCATTTTTCCATTTTGAGATTATCAATGAT TTTAGGATTAAGGCCCCGTTTGGGAGATGTTATTTGAGTTTATCTTTTAGTACAAACGTTTATGCTAGTGTTTGGGAGAG CTTATATGAAGAGTTTATGATGTACTTATAAGTTGTCTTGATCTTATTTTCATAAGTTGCTTAGATTACCTAATGAATAA GTGCTTATACCTACCTATAACATATTTTGAGCTTATTTCAATAAGCTTGTCAAATTAGCTTATGAATTAGCACTTATCGC TAGCTTAATTAAGTTGTTTACCCAAACACACCCGGAGTTCTCGTCAAATTCTAGGTTTGTGACTGGTTGTTGGAATGGAT AACTTATGTAGCGACGCAGGTGTCTTGGTTTTTTTATAAACAGAATCATTTCAAAAATAGTGTCCATATCAAAAGATTTG TTCTGCGGCAGCCATTAAGTTTAGTTTTTCATGTTCTCATAGAAAACATGACAATTTATGAATCTTCTAGAATGTAGGTT GTGATGGTTCAGAAAAATTGTTTGAAATTTATTCAGAGTAATCAGAAATTAATATACCTTAGGAGTAAAGTCGTTGAAAT CAGTTGAATCATGCAGCAAATTGTGAAAACCTTGCTGAATTTTGTTCCATGCTCTTATGTTGAAGTGGGTTATGGCCTTC AGGCTGTCATTTTTACTAGTTATCAATTCATAGAGGTTTGAGTTTTGCAGACAAAGGATTTGAAACAGCTTTATTTCTTT CCTGTATGCGCTTTAGTTTTTAAATGTTGTCCTCAAACAATGAGACCAAGAGGTTGTACCATAGAACAACAAAGGGATGG TAAAAAATAACTTATTGGTTTTTGGAAACTTCTAAGTTATGCATCACTTTTTAAGAATATCTTGTCCAAGCTTAGATCCT ATACTGCATTTTTCTTCTTGCTGTGATGGTTTATGGTAGGATTACAAAGTCTCTTAATGGTTTGCGGTTTAAGGCAGAGA TATGAAGCAACTAGCAGTTTAAATATGTCCCGAGGTGTGAATGATGGACATCTTTATCCACTAGAAAGAAGCGGAGACTA TTTTGATCCTAACTTCATCTGTGCACATTCTAAAATTGGAATATCATTTCAGGTGACAAATGATATATTCACAAAAGAAG ATGGCGAGTTCTTGGTGAGAAATAAAGCACTTCCGGAGGAAAGGATACGTGCTGTAGAAACTGGGGGCTGTCCACATGCT GCGATTCGAGAGGACATCAGTATTAATCTTGGACCATTGGAAGAGCTTTCAAACTTGTACAAAACAGATATACTTCTTTG TGAATCTGGGGGAGGTATTATTACTTCAATAATTAGCTATTGTTTTTTAAATTGAGTTAAATGTTTTCTCTAGTAAAATT GCTTATAATATGTTATTACATTATGTCATTGCTTTTGAAATTATGCTTGATCCCAAAAACTTTGGATATTGACTTGAGTT CTTCTGCAGATAACCTGGCTGCCAATTTTAGCAGGGAACTGGCTGACTATATTATTTACATAATAGATGTGTCTGGTGGT GATAAAATTCCTCGGAAAGGTGGTCCTGGAATCACGCAAGCTGATCTCCTTGTACGTGCTGTTTGTATAGCTTTTGCAGC GTGTCTTTCATTAATTCATTCATCTTGTTCATGACATGGTATCAGAATCTCTATAACCAAGTGGTTTAGAGTTCAACTTT TATTGCCACCATTTTTCTAATAAAAAAAGTTGAATTTCAGCACATGGTATGTGGACCTGTGCATTGTCCACGCTTCAAGC GCAATGGACTCTTGTGTGAGGGGGAGTTAGAAATATAATATAATATAATATAATATAAAATCATCTATGTTTTTCCTTTA CCTTTGGGGATAATGGGTTCATGACACATTTGTACAATTCTTGCCATGTTAATTTTAAATACGACAGCAGAACTTTTTGG ACTTAATTCCAGGTGATAAACAAGACTGACCTTGCACAAGCAATTGGGGCTGACTTGGGAGTCATGGAGCGAGATTCTCT TCGGATGAGAGATGGGGGGCCATTTGTCTTTGCACAGGTAAGTTGAGTACATTATTTACTGGGTTACAAGTGTTTTGGTA TAAGGGCCTACTCTGCATACATTCAAGTTTCAGTTTTTCACTAGGCCTGCTGTGTTTATTCTTTCCATACTTTTGCCCTA CTATGCATACATAATACATTCAAGATTTTCAATATTTAAACAACCACTAGCATCATGTTAACAATACAGCCAGGTCATGT TAACTTCAACCCAATTTCAAAAAAAAAAACAAAAAAACTTCAACCCTTAATTTCATTTTTTCATTATAGAAAACAAAACA ATTTGAATATTTGAGAGGGATTGAGGGCTAGACTTGAAAAGAAGAGCCTGTACTGGCATATTTTGTGATTGATAGCCGCT GGACGAAATATACAGATCTAGATTCAGAAAGTACATTAACTGTATGTTTGATGTGTGTTAGACACACTCCAAAACACGTT AGGGAAGAAGCTCCATATTGTAGCTTATGAGTTAACGTGATTTTAGGATCTAAACATGAATTGCAAACGTGTATCCAAAC ATGCACAAGTTGTGTAGCAGAGCTATTTGAGAGTCCAACTGCATAATACATAATCTGTACCCAGCAGGATCACAATAACA TATTGAACTTTTCTATCTGTATCTTGTTTGATTTATAAAAGGGCATCAAGGTTATACTTAAATGAATCATTTTTTTCCAA CTCAAATTTCACTTCTTTTTCCATAACTATTTATTAGAGCTGGTTCATAATATGAAAGAAAATGAAACATCATTGCTGAC ATTCCCTCTGCTGTGGCTCTGAGAGCCTCCAACAATGTGAGACAAGGCCAAAGCTGAAGAGATTAACATCCAACAATGAC AATTAAGAGAGTTCTCTGTCACACCAGAACATTCTAGAGTCCTGTCTCTCTTCACAAATCCAACAAGCCCTCAACTTACT CCTCAAATTCCTTTTCTATTTCCATTTCAAGTGAGTCCCTCAATTGTCTGCTATCCTCACACACATAGCATATAAGAAGG GGAAAGCGAGAAAAGTAAGAAAAACAAATCTAGACCATTCGACCGCACATGGATGGTCAACATTAATTCCTCTCACCTGA TATGCTCCTTCCTTGTACATATGTGTTTGAGTATGCAGAAGCTTGTGCAGTTCACTGTTAGATAACCCATGAGTTAGTTT ATAACCTGAGGTATTTAGAAATGGTAGGATATATCAATGTATACAAATAATAAAAAAAGAATAGAGGATAAACTTCTGGT CATTTGAGAAAAGGATTGAGGCCTTGGGCTAATGGGCATGCAAACCCACGAAGTTCTGCAAATCTTTCTGTAAAGTGGTG AGATTTTCTCTATTTCTTTATAATGCAATACCAAGTTCCTAACAGTCACTTCCTTGTATCATCTTTAAGGCAATGTTCCT AACATAGCTTGTTGGGAGGTATGCCTTATTCAACCAACCGCGCACCTGATAGCATCTGAGTGCATGTTTAGAAACACTTC TACAATTAATTTCACAGCAAAATCAATAATGGGAAGAAGCTTCTGTGAGTAGCTTCTCGGTGTCATAATTGATTCTGAGA AAAGAAAACTGATCAAAACATGCCGAGTCTTTTTCCAGCTTTCCAATTTTTAACATCCAAACCACATTTTTCTATTCTGG TCCTGTAGTATGGATGACCATGATTCTTCAATTTTGTACTCCTCTTCTTAACTTGATTTCCGTATCAATGTGCAGGTGAA GCATAAGGTCGGGGTAGAAGAAATTGTGAATCATGTCATACAGGCATGGGAGGCAGCTACAGGGAAGAAACGTCATTGAC ATTTCTTCGAAATACGGTGTCATCATCACACGTTATCTCTTTACACGCATTTTAAGTACTTCAGCAACATCGTGTTCTCT ACTTGGAGCCTGAGCTCTTGTGTAGTGTCTATTTGCATGTTTCATTAACAACGCCAGGAACATGTTACTACTTGGACCTT ATCAGTTTGTAAGAGCTTTCTTTTCTATATTGTTATGGTAAACTCCCTTGGCATAATAATTTTATAAGTTATGAGAGTTG TTTCACGAATTGTCACAATTTGTAGCTTGTTTTAACTTGCGTTGCAAATAGTATGATGATGGATTTGGCTTCTCTAAAGT GCAGTATGCACACTAAAGGAAAAAGTATAAGTGTTAAATACATATATTATAAATTATAAGGTTGTTAAAATTTGAACATT GGTATTGACTATTGAGTTTTACTCTCATACACTGGCACAATCCACTCACCCTAAATTTTTATGAACAAAAAATTACTACA CTGTAGATTATGTGGTGTTGTAACTTGTACTATTATGGTTTTTTTTGTTGAGAAGAAACAAAATTGTATTAAGCAAAAGC AACTAGTAGCATCTGAATCTAAT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0023100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCTGCAGGTGACCACAACCACGAACACCATCACCACCACCATCATAGTGACCATGGCCATGACCATGATCATCA TGATAACTCCCACTCTCACTCCGATGGAGTTGCATCAGCAGGATCCGATTCATATGTAGGTCCTGATGGGAAGGTGTACC ACAGCCACGATGGTCTCGCGCCACACTCTCACGAACCCATTTACTCTCCTGGCTTCTTCACCAGAAGAGCTCCACCTCTT ATCAACAGGGATTTCAATGAAAGAGCTTTCACCATTGGCATCGGTGGACCAGTGGGTACTGGGAAAACTGCTTTGATGTT GGCCCTTTGTGAATTTTTGCGGGACAATTACAGTCTTGCTGCGGTGACAAATGATATATTCACAAAAGAAGATGGCGAGT TCTTGGTGAGAAATAAAGCACTTCCGGAGGAAAGGATACGTGCTGTAGAAACTGGGGGCTGTCCACATGCTGCGATTCGA GAGGACATCAGTATTAATCTTGGACCATTGGAAGAGCTTTCAAACTTGTACAAAACAGATATACTTCTTTGTGAATCTGG GGGAGATAACCTGGCTGCCAATTTTAGCAGGGAACTGGCTGACTATATTATTTACATAATAGATGTGTCTGGTGGTGATA AAATTCCTCGGAAAGGTGGTCCTGGAATCACGCAAGCTGATCTCCTTGTGATAAACAAGACTGACCTTGCACAAGCAATT GGGGCTGACTTGGGAGTCATGGAGCGAGATTCTCTTCGGATGAGAGATGGGGGGCCATTTGTCTTTGCACAGGTGAAGCA TAAGGTCGGGGTAGAAGAAATTGTGAATCATGTCATACAGGCATGGGAGGCAGCTACAGGGAAGAAACGTCATTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0023100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASAGDHNHEHHHHHHHSDHGHDHDHHDNSHSHSDGVASAGSDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPL INRDFNERAFTIGIGGPVGTGKTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIR EDISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAI GADLGVMERDSLRMRDGGPFVFAQVKHKVGVEEIVNHVIQAWEAATGKKRH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 62 62 - –
PANTHER
PTHR31715
10 291 282 2.9E-174
IPR004400
SUPERFAMILY
SSF52540
84 284 201 5.99E-31
IPR027417
Hamap
MF_01389
88 285 198 41.89
IPR004400
CDD
cd05540
90 279 190 6.88711E-138 –
Gene3D
G3DSA:3.40.50.300
90 282 193 9.5E-41 –
TIGRFAM
TIGR00101
91 279 189 1.6E-81
IPR004400
Pfam
PF02492
92 260 169 9.1E-31
IPR003495

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0006807
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Subterm of
GO:0016151
Molecular function Nickel cation binding Interacting selectively and non-covalently with nickel (Ni) cations.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0023100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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