Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0023100.4

Overview

Field Value
Gene ID LotjaGi4g1v0023100
Transcript ID LotjaGi4g1v0023100.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Urease accessory protein ureG; TAIR: AT2G34470.2 urease accessory protein G; Swiss-Prot: sp|O64700|UREG_ARATH Urease accessory protein G; TrEMBL-Plants: tr|I3SUK1|I3SUK1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0023100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:2875610..2878559) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCTTCTGCAGGTGACCACAACCACGAACACCATCACCACCACCATCATAGTGACCATGGCCATGACCATGATCATCA TGATAACTCCCACTCTCACTCCGATGGAGTTGCATCAGCAGGATCCGATTCATATGTAGGTCCTGATGGGAAGGTGTACC ACAGCCACGATGGTCTCGCGCCACACTCTCACGAACCCATTTACTCTCCTGGCTTCTTCACCAGAAGAGCTCCACCTCTT ATCAACAGGGATTTCAATGAAAGAGCTTTCACCATTGGCATCGGTGGACCAGTGGGTACTGGGTATGCTGCTTCGTTTCA CAATATTTCATGCCAAGTCTCAGTTTTTAATTAATATAGTAAAGTGGGCATTGATTGATATAGTTTTGTTGGGTTTAACT GTTTTATCAATTCCTATTGAAATATAATGATGTATAGAATGCAAAAGGTGAAAAATTTCTGTTTGTCCTGTTTGTGCTAG CTATCAGCTGAAATTTCATAGTGAAGTTTTGCTACAATTTCAATGTTCTTTGTAGGTAATGGATTTTTTTTTTTTATTTG ATGGTTCATGGTTAAACTGTGCAGGAAAACTGCTTTGATGTTGGCCCTTTGTGAATTTTTGCGGGACAATTACAGTCTTG CTGCGGTGAGTGTCGTTATAAACCTTATTTCTTCCTAAATATTGCATTTTTCCATTTTGAGATTATCAATGATTTTAGGA TTAAGGCCCCGTTTGGGAGATGTTATTTGAGTTTATCTTTTAGTACAAACGTTTATGCTAGTGTTTGGGAGAGCTTATAT GAAGAGTTTATGATGTACTTATAAGTTGTCTTGATCTTATTTTCATAAGTTGCTTAGATTACCTAATGAATAAGTGCTTA TACCTACCTATAACATATTTTGAGCTTATTTCAATAAGCTTGTCAAATTAGCTTATGAATTAGCACTTATCGCTAGCTTA ATTAAGTTGTTTACCCAAACACACCCGGAGTTCTCGTCAAATTCTAGGTTTGTGACTGGTTGTTGGAATGGATAACTTAT GTAGCGACGCAGGTGTCTTGGTTTTTTTATAAACAGAATCATTTCAAAAATAGTGTCCATATCAAAAGATTTGTTCTGCG GCAGCCATTAAGTTTAGTTTTTCATGTTCTCATAGAAAACATGACAATTTATGAATCTTCTAGAATGTAGGTTGTGATGG TTCAGAAAAATTGTTTGAAATTTATTCAGAGTAATCAGAAATTAATATACCTTAGGAGTAAAGTCGTTGAAATCAGTTGA ATCATGCAGCAAATTGTGAAAACCTTGCTGAATTTTGTTCCATGCTCTTATGTTGAAGTGGGTTATGGCCTTCAGGCTGT CATTTTTACTAGTTATCAATTCATAGAGGTTTGAGTTTTGCAGACAAAGGATTTGAAACAGCTTTATTTCTTTCCTGTAT GCGCTTTAGTTTTTAAATGTTGTCCTCAAACAATGAGACCAAGAGGTTGTACCATAGAACAACAAAGGGATGGTAAAAAA TAACTTATTGGTTTTTGGAAACTTCTAAGTTATGCATCACTTTTTAAGAATATCTTGTCCAAGCTTAGATCCTATACTGC ATTTTTCTTCTTGCTGTGATGGTTTATGGTAGGATTACAAAGTCTCTTAATGGTTTGCGGTTTAAGGCAGAGATATGAAG CAACTAGCAGTTTAAATATGTCCCGAGGTGTGAATGATGGACATCTTTATCCACTAGAAAGAAGCGGAGACTATTTTGAT CCTAACTTCATCTGTGCACATTCTAAAATTGGAATATCATTTCAGGTGACAAATGATATATTCACAAAAGAAGATGGCGA GTTCTTGGTGAGAAATAAAGCACTTCCGGAGGAAAGGATACGTGCTGTAGAAACTGGGGGCTGTCCACATGCTGCGATTC GAGAGGACATCAGTATTAATCTTGGACCATTGGAAGAGCTTTCAAACTTGTACAAAACAGATATACTTCTTTGTGAATCT GGGGGAGGTATTATTACTTCAATAATTAGCTATTGTTTTTTAAATTGAGTTAAATGTTTTCTCTAGTAAAATTGCTTATA ATATGTTATTACATTATGTCATTGCTTTTGAAATTATGCTTGATCCCAAAAACTTTGGATATTGACTTGAGTTCTTCTGC AGATAACCTGGCTGCCAATTTTAGCAGGGAACTGGCTGACTATATTATTTACATAATAGATGTGTCTGGTGGTGATAAAA TTCCTCGGAAAGGTGGTCCTGGAATCACGCAAGCTGATCTCCTTGTACGTGCTGTTTGTATAGCTTTTGCAGCGTGTCTT TCATTAATTCATTCATCTTGTTCATGACATGGTATCAGAATCTCTATAACCAAGTGGTTTAGAGTTCAACTTTTATTGCC ACCATTTTTCTAATAAAAAAAGTTGAATTTCAGCACATGGTATGTGGACCTGTGCATTGTCCACGCTTCAAGCGCAATGG ACTCTTGTGTGAGGGGGAGTTAGAAATATAATATAATATAATATAATATAAAATCATCTATGTTTTTCCTTTACCTTTGG GGATAATGGGTTCATGACACATTTGTACAATTCTTGCCATGTTAATTTTAAATACGACAGCAGAACTTTTTGGACTTAAT TCCAGGTGATAAACAAGACTGACCTTGCACAAGCAATTGGGGCTGACTTGGGAGTCATGGAGCGAGATTCTCTTCGGATG AGAGATGGGGGGCCATTTGTCTTTGCACAGGTAAGTTGAGTACATTATTTACTGGGTTACAAGTGTTTTGGTATAAGGGC CTACTCTGCATACATTCAAGTTTCAGTTTTTCACTAGGCCTGCTGTGTTTATTCTTTCCATACTTTTGCCCTACTATGCA TACATAATACATTCAAGATTTTCAATATTTAAACAACCACTAGCATCATGTTAACAATACAGCCAGGTCA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0023100.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCTGCAGGTGACCACAACCACGAACACCATCACCACCACCATCATAGTGACCATGGCCATGACCATGATCATCA TGATAACTCCCACTCTCACTCCGATGGAGTTGCATCAGCAGGATCCGATTCATATGTAGGTCCTGATGGGAAGGTGTACC ACAGCCACGATGGTCTCGCGCCACACTCTCACGAACCCATTTACTCTCCTGGCTTCTTCACCAGAAGAGCTCCACCTCTT ATCAACAGGGATTTCAATGAAAGAGCTTTCACCATTGGCATCGGTGGACCAGTGGGTACTGGGAAAACTGCTTTGATGTT GGCCCTTTGTGAATTTTTGCGGGACAATTACAGTCTTGCTGCGGTGACAAATGATATATTCACAAAAGAAGATGGCGAGT TCTTGGTGAGAAATAAAGCACTTCCGGAGGAAAGGATACGTGCTGTAGAAACTGGGGGCTGTCCACATGCTGCGATTCGA GAGGACATCAGTATTAATCTTGGACCATTGGAAGAGCTTTCAAACTTGTACAAAACAGATATACTTCTTTGTGAATCTGG GGGAGATAACCTGGCTGCCAATTTTAGCAGGGAACTGGCTGACTATATTATTTACATAATAGATGTGTCTGGTGGTGATA AAATTCCTCGGAAAGGTGGTCCTGGAATCACGCAAGCTGATCTCCTTGTGATAAACAAGACTGACCTTGCACAAGCAATT GGGGCTGACTTGGGAGTCATGGAGCGAGATTCTCTTCGGATGAGAGATGGGGGGCCATTTGTCTTTGCACAGATTTTCAA TATTTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0023100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASAGDHNHEHHHHHHHSDHGHDHDHHDNSHSHSDGVASAGSDSYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPL INRDFNERAFTIGIGGPVGTGKTALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIR EDISINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAI GADLGVMERDSLRMRDGGPFVFAQIFNI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 62 62 - –
PANTHER
PTHR31715
10 265 256 9.0E-160
IPR004400
SUPERFAMILY
SSF52540
84 263 180 6.65E-28
IPR027417
Hamap
MF_01389
88 267 180 38.674
IPR004400
CDD
cd05540
90 267 178 2.62103E-129 –
Gene3D
G3DSA:3.40.50.300
90 267 178 3.2E-37 –
TIGRFAM
TIGR00101
91 265 175 2.2E-78
IPR004400
Pfam
PF02492
92 260 169 7.2E-31
IPR003495

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0006807
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Subterm of
GO:0016151
Molecular function Nickel cation binding Interacting selectively and non-covalently with nickel (Ni) cations.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0023100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…