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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0023900 |
| Transcript ID | LotjaGi4g1v0023900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transmembrane protein, putative (Protein of unknown function, DUF599); TAIR: AT3G18215.1 transmembrane protein, putative (Protein of unknown function, DUF599); Swiss-Prot: sp|A8ZUA0|ATPG_DESOH ATP synthase gamma chain; TrEMBL-Plants: tr|I3STV9|I3STV9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0023900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2937738..2943305) extracted from Lotus japonicus Gifu genome v1.2.
TTTGAAATTAGTTTGGTGTCTTTGGATTTGGCTTGAGACTATATATCCTTGAAAAAATCATTTAGCTTTTTACTGAATCA GAATCACTTTCCAAATTCCTTCTACCAAACATAAACAAAGATAGCTAAGTGTGTTGGTGGCCATGAGCATGGAGAATGAT CGCTTGGAGCATTTGTTGGTGGTGCTGGGTCTGTTGGTGTTCTTGATATACCATATCTGGCTTCTCTACACCATAGTATA CAACCCTGTTCGAACTATCATGGCCTAAACGCCGAGTCTCGTCATCAATGGGTTCTTTTCATGATGAGTGTGAGTACTTT CCCTTGGTTGTTGATTGAGTTTACTCTTAACTTTCTATTTCTTTCAATTGATGACAGAAGCAAGTTTATATTTTGATTAT AAAGTCAGAATCTTTTTATTATGATAGGTGACAATGAATCTGGTATTCTAGTTTATGACTATTCTTATTACTGAGGGAAA AAATAAAGCCAGAGTTCCCCTTCTTTCTGGAGCTCATTGAAGCAAGGGCACTAGCATGTTCCCATTTCCCCTCTTTTGGT ATCTAAATGTAGTGCATTACCCTTTTGTATGTGAATTAATTGCAGCTTGTTGGTGATGTTTGTCAGGCTAAACCTAACAC CAAAGTTGTTGAATCTGCCATTTTTTATTTATGCACTTGGGTAGAACATTTAAGACTATTAGGGTAATTTAAAGCAAAAC TGGGTATTTTAACTGAACATGTCATTGCCCTGATTGGTTGAGAGTTGAGACACTGCTGAAATTGTTAACATTGGGTGATA GTAGTCACTCTAGATTCTGGATTCTCTTAGGAAAGACTTTTTTTTCCCAAGTTAACACGGAATCTAGAATACTGGATTGT TCAAGTTTAATTTGAACATGACTTTTTAATATGGTACAGTATTGAAACCTTGTTCATTAGCATAATAGATTGAGTTTCAT GCTTTCCAATTTCAACTCATTGAAAACTTAGTTGTTAGATTGAATTGTATGTGTCCCTTTCGCCGTTTCAAGTCCTCTGC TGTTTGAGTCAGTAGAAATTGCTGTTTCTAGACCCTTTAAATATAGCAAGATTTGCTTTCCTGTCCCTGCTGATATAGCG ACTTTCTTTCATGTCCTCATAAACATTCTTCAAACACATGGCACAGTTGACATGTGCCTCCGTTTACCACATCAACAATT AACAGAGTTTGGTTATTAGAAAATTTGAAAAAATTAGGGATGTATACAAGGAACAAAAATCACTATATTTGTAAGGAGTA AGGACTGAAAATATATGTGAAGCCTTGAAAAAAGCTAATGGATGGTGGAAACCTTGATGAGTTATTGTACTAACTGAGGA CATATCTGTTTAATCAGTAATGTTTTTCAGATGCTTTCTTCTGCTGTCTATCTCAAAAGAGGACATTTAGTTATAGAGAC CTCCCATTGAAGTGTAATTTGTTGAACCTTCTGATAGTACTCCTTAAGGGCTCTTACATAAGATATATAGTGTTAGCGGG AACTCAACTTCTTGTTTCTTTGCATGTCCTCATTTCTTCGCTTTAAAGGTTACAAAGCTTTCTTGTTTGGCTGCACTAAC TCATAGTTTGAATTGATCAAACACCAATTCAGGAAACTAGCTTGATGTGTCTAGAAGTTGTTAACGAGATAAAAACACCA AAGAACTACCACCACATGGTTTTTTTGTGCACTTCTTATGAACTATAATGAAGCCTTGCCTTTGTCTTACATTTTGATAT TTAGAAAGATCAAGTGTACAATAGAAAAAAAAAATCAACAGAAGAAGCACTTAAGAACACACTCTGAACTTTAGGTAACT GATGCTTCATTGTTGGTTCAATGTGCTTTCCATATAACTTAGTATTTGCTGTGCTTACTGGTATGGTTGTGATACTGGCC TTGTCTTTGATTGAGGCTGCATTTGGAAGAGTTTATTTTAGCTTATCGTATACCATAAGCGCTTATCTAAGTGTTTGACA GATAGCTAATAACCTACTTACAAGCTGTTTGAGTTTATTTCCATAAGCTGCTCAAATTAGCTTAAAAGTAAGCGCTTATA ACTACCTATAAGCTATTTTGAACTTATTTTACCAAGTTTATCAAAATAGCTTATGTGGTAAGTGCTTATGGCAATAAATA CGCACCCTAAATATCCTTGTTATTTGGTCTTTTGAGGTTCTGATGTTGTGCAACATTATCTGTAAGTTTTTTCCTCGCTT TTCTCATTCCATCAAACCCCTCGCCTTCAGAAATCATTTTGACAAGCTGTGAACATGATTTCTAGAATAAATTCCATTTA ACATGATTTCCAGAATTAATTGCATTGCTATATTTTCAGGATCCCGCGAAGAATGGAGTTTTGGCAGTTCAAACTATCCG CAACAATATCATGGCATCCACTCTTCTTGCTACAACAGCAATCAAATTCACTTCACTGATTGGTATTTTTGCTAGCAATG CATGGAATAGTGATGACACTGCTCCCATGCTTTACAGTACTTATTCAATCAAACGTATTTCTATCACCATATGCTTCCTT GTTGCATTCTTATGCAATGTGCAGTCTATAAGATGCTATGCCCATGTAAGCTTCTTGATCATTGGACCTACACTCAGAGA CAAAAGGGAGTACATGGAATACATTACAAAAACCTTGAACCGTGGAAGCCATTCTTGGTCCCTTGGATTGAGGGCATTCT ACTTGTCATTTCCTCTGTTCCTCTGGATTTATGGACCCATACCCATGTTTGCTTGTTGCTGCTTGACATCACTTATTTTG TACTTATTGGATACAACAGCTAAAATTGCAAGGGATCTTCACAGCAACTCATTCAGGAAGGAGAGGGGAACTCATGATGT GGAATCTGCAGTGGAGCCTGATTATCATCCTTTAGCTGGTAACAATTTGTCTTAAGACACACAAGTGTGGATTGTTGAAT ATCTATTAAGATTTAGTTTATTATTAGTCTTATCTCATAGAGATATAGTTAAGATTTGTTTATCTATTTTAGATTAGTAT CTATTTAAATAGAGATGATATCTATTTAAATAGAGATAGGATTAGATAGATTTAGTTTCTCTTTATCTCTTTGTTAGTCT ATATATATTGTAGTCTTTAGTCAAGTATTAATCAATGAAATACAATAATTATTTATCAAATTCAAGTTGGTATCAGAGCG CAAGTTTCGATCCTACCGCTGTGAGGGGGCTCCTCCCCCGTGAGCCCCCTCATGGTGACTTTCCAAATCTTTCTGGATTT ATTTTTCGTACTTTGCTTCCGCTTGTTAGTTCTAGCCGTTTTCTTACGGCCTCGTTTCTTTCTGATTATGGTCCCCTTTG TCTTGGAACCCTAGTAATGTTCAGCCACTATCAATGTCCTTCCACGCGCACTCTTCTTCTCAGCGAGTGAGTTACACTCG CGCCACCCTCCAAGCATCCTTTCGCCGTCGCAATTGCACAGACAAGGTCGTCTACCCCTCCTGGTGCTGTTTCAGGGGTC CTTTTGCCCAGATCCAGAGTATTGTTTGTTGTTCTTGGATGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGACT TACTTTATCGTTATGTGGTGGTAAAGCTTCAGAAGAGGTTTTTGTTGGAGCTTTCCTTTCTATTTCATCAACAGCAGTGG TATTGAAGTTTTGATGGAAAAGAACACTACTAATGCCCTTCATCTTGTGATTCTCCTATGATTTCTTCGTCAATTTCCTT CTTTGCCAATTCATATACTGAATTTTCAGTATAGAAATCACAAAAAGATCATTACATTTGTGGCGATCAAAATCAGTTTT TCATAAATTAATGTGTTCACAGTGATGAAGTGTTCGACCAACATCATTACAATTCTGGTTCATGACAAGGTTGAGATTTC CTTGATGCAACAGTTTGAGCAATTTCAGATTTCGCAGATTCACTCTCTTTTTTCTGCTGTGTGAAAGGGCAAAGTCTTTA CCTACTTGTTGGGAGTAAGCAGTGAAGGGCAATTTCAAGTCTCTACAATTTCTGATTACCGCATTGACATTGTGTTTGGC AGCAGTAGCTTTTCTCCGCAAGTTAATTATATTTGTTGCAAGCTATGCATATGACATATATGCTCTAGCTTGAGGGGAAG ATCTGGAAATATCTTAATTATATTTGTTACAAGCTATGCATATGACATATATGCTCTAGCTTGAGGGGAAGTGTTGGATA TTGCTAAATATCCTAATAAAGACCACAATCAACACCTTCGACAATCGTTACCCTTTGTTGCTGGTTTGGTGGAGGTTGTA TTCAAGAAGTGTTTGGTTGGATCTAATTGTATTGCGCTGCTACACTATTGATAGTCTTTGAATGTTGCATGTGATTGCAA GAATTGAAATTCTTCTCCTTGGCAATTGGCAATGGTAATTCGTTTGTTTGGTGAAGGGTTGCATTGTTTAGATCTCCGGT GTAAAGGATTTTATTGTTTGGCTCTGTTTTGAGGTGTTGTGCCGCCACCGTGGTGATCGTCCGGTCCAACTCTTCTAGTT TGGTTCGTGAGTCTGCTGTGTTTACTCATCTGCGATGTTTCTCGCTGTTTGAGATCTTAGTTTGCGTCTCATGGTTCGAG ATGCTCTTATTACAATGATCTTGGCTGACTTTATGCAATTTGGTTTGGTTTGGTTTTGGAGGTGACAGTGTCACCTTCGT TTGTTTTGTCTCGATTGTTTGGTTTTCTGGTTTTAGGGCTTCAGCTGCAGGTTGCGCTGACCCTGTTTGGTTTTCTGGTT TTAGGGCTTCAGCTGCGAGTTGCGTTGGCCCACTCTCTAATGTTTGAGAGTTGTCTGTGTCAAAGTTGACACCATTGTTT GTTTTAGAAGCCATCAATCGATCGACCTCAAGTATGTTTTATTTCTGTATGGTTGCTGTTGGGGTAAGCTATTGCTTCAG CCTTATTTTGTTTTCAGGCGTATTGTTGCTGGTTTTTCGCCCTTGTTTGCTGGCTCAGCTACCCTACGACACTCCAGAAG AATTGGTTTTTGTCTTGCATCAATTTCAGCCAGATCAAGTATGAGAAGTTGTCTTTTGCCTTCCCATGGATTTAGCAGAA GTTCGAAAGATTATTCAATTTCAAGTATGAGAAGTTGTCTCTTGCCGCCATGGATTTACTAAAAGTTTGAAAGGTTATTC AATTCAGAGATTTGCCAAGCCCGTCATTAATAAGGGATATCTATTAAGATAATTTTCTTCTTGGGTTCGATTTGTTACAA GCTTAAAGCTAAGTAAGCTTTAGCTTGAGAGGGAGTGTTGAATATCTATTAAGATTTAGTTTATTATTAGTCTTATCTCA TAGAGATATAGTTAAGATTTGTTTATCTATTTTAGATTAGTATCTATTTAAATAGAGATGATATCTATTTAAATAGAGAT AGGATTAGATAGATTTAGTTTCTCTTTATCTCTTTGTTAGTCTATATATATTGTAGTCTTTAGTCAAGTATTAATCAATG AAATACAATAATTATTTATCAAATTCAAGTTGGATCATGTAAAATTTA
CDS sequence (LotjaGi4g1v0023900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAGTGATCCCGCGAAGAATGGAGTTTTGGCAGTTCAAACTATCCGCAACAATATCATGGCATCCACTCTTCTTGC TACAACAGCAATCAAATTCACTTCACTGATTGGTATTTTTGCTAGCAATGCATGGAATAGTGATGACACTGCTCCCATGC TTTACAGTACTTATTCAATCAAACGTATTTCTATCACCATATGCTTCCTTGTTGCATTCTTATGCAATGTGCAGTCTATA AGATGCTATGCCCATGTAAGCTTCTTGATCATTGGACCTACACTCAGAGACAAAAGGGAGTACATGGAATACATTACAAA AACCTTGAACCGTGGAAGCCATTCTTGGTCCCTTGGATTGAGGGCATTCTACTTGTCATTTCCTCTGTTCCTCTGGATTT ATGGACCCATACCCATGTTTGCTTGTTGCTGCTTGACATCACTTATTTTGTACTTATTGGATACAACAGCTAAAATTGCA AGGGATCTTCACAGCAACTCATTCAGGAAGGAGAGGGGAACTCATGATGTGGAATCTGCAGTGGAGCCTGATTATCATCC TTTAGCTGGTAACAATTTGTCTTAA
Protein sequence (LotjaGi4g1v0023900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSDPAKNGVLAVQTIRNNIMASTLLATTAIKFTSLIGIFASNAWNSDDTAPMLYSTYSIKRISITICFLVAFLCNVQSI RCYAHVSFLIIGPTLRDKREYMEYITKTLNRGSHSWSLGLRAFYLSFPLFLWIYGPIPMFACCCLTSLILYLLDTTAKIA RDLHSNSFRKERGTHDVESAVEPDYHPLAGNNLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 157 | 157 | 9.4E-52 | ||
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 190 | 190 | 9.9E-90 | – | |
| PANTHER | 1 | 190 | 190 | 9.9E-90 | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 62 | 20 | - | – | |
| TMHMM | 63 | 80 | 18 | - | – | |
| Phobius | 63 | 91 | 29 | - | – | |
| Phobius | 92 | 128 | 37 | - | – | |
| Phobius | 129 | 153 | 25 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Phobius | 154 | 194 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0023900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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