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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0026600 |
| Transcript ID | LotjaGi4g1v0026600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatase 2C family protein; TAIR: AT2G34740.1 protein phosphatase 2C family protein; Swiss-Prot: sp|O64583|P2C28_ARATH Probable protein phosphatase 2C 28; TrEMBL-Plants: tr|A0A072UNH3|A0A072UNH3_MEDTR Phosphatase 2C family protein; Found in the gene: LotjaGi4g1v0026600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3244308..3249163) extracted from Lotus japonicus Gifu genome v1.2.
AGTACCCTCTTGTTTGTCCACAAGTTCTCAACTCAAAAAAGAGACATTCATCATACATAATGGAGGTATGCTATTTTTAT GCAAAGGGCTGCTAAGCTGCTTTATATGAATGTGATTCACAATTTAAGTTAATTATATGTATGTGTATATATCTATATAT ATACATATCATGGGATACTTGTGTAGTAACTGAAACTATATATAAATTACATTTATATGCCTTGCCTAAATAAGTAGAAG AAAATTTTATAAATGTGCATCACTTAAATTAAGAGTCAAGACCAATCTTGCATATATGTAGCAAAACGGGTTAAAATAGT TAGCAATTTTTTCCTACTTTCTTTAATATGCTTCAGGTTTTATTGATAAATTAGGTGCTCGCGTTAGTCACAATCATAGT AGTCAAAATTGCGATTAAAATCACTTAATCGTAAGCTTATGTGATTAGTGGTGCCATGAGCAACTAAAATCACATTTGTG CCTTAATCGTGGAGAGAAAAATAAAAGCTATGCAGTTCTCTTAACCTGCACATATTTTAAACTTTCCCATTGGTAAGGGA ATAAAGTCACTAGGAACTAATTACATGGCGAGCATGTTGCACTTAATAATACGTAACTTTGCTGTGTCTTGAACAGGCTC ATTCTAACTTGAAGAAAAGAGAGTCTATCTTAATTTCTGATGAGAATCCTGCTGCATTTAAGGTATATATGCATGCAATG CAACTTTTATGTGTCCTTTAGGGTATGTTTGGATCGAGAAGTTTGAAGCACAAGAGATATGTGGGAGGGGTAATTGAAAG GTTATTGCTAGTCTTTCATTTCATTCCTCTTGTTTAAAAAATTAAGGGTTATGGATCATATTAGTCCTTGTGTTTGTAAA AACGTTTGATTTTGGTCCCTCGATCAAAAAACCGTCAGTAATTGTATTATAAACCGCCATTAACAGTAAAAAAACAGCCA CTAATCGTCATTTTTTTAGGTTAAAGGTCATATTAGTGGCTTTTTTTAAATTAATTTTTGGGTTAAAGGTCATATTAGTG GCTGTTTTTTTACCGTTAAAGGTCATATTAAAGGTCATATTACTAATGAGTTTACCCAAAATCAAACACTTTTACAAACA CAGGGACTAATATGACCTTTAACCCAAAAATTAATTAAAAATATTTAACAAAATGAAGATTATCCTATACTTCCCCATGC TAATCATCTGATTGAGTTTATTTTACAGATTGAGTCAAATGGTTAAGACCTCAGGTGTTTTTAAGTTCATTTTGATTTAC CAGCATGTCTTTGTATGTTTACTTCTGCAGGTCTGCATGATACATAATTGTAAGGTCAGGAACTTGAATAATATAATAAG ACCATCACAAAAGTTAGTATGGTTCAGTAGTAAAGGAGAACATATATAGGTGCATATGGTTGTAATTTTCTGTCAACTTT CTGCTGATACAAAAAGCTTATATGGACTAATGATCTAATCTAATTCTATGAATATTAGAAGAGGAGATCAAGAATGGGAA GCCATGTGGACCCTCTTGTAAGAAAGGTTATTCTCTTTCATTCTTGTTATATGCATTATTATCAGGATTCTTGTTATATG GTATGTAAATACAACACTCAAGCCATGGGGAATCATGGTGAGATCTGATTTTGAATATGCAAATATGAACATGCAGGATA TATTAATCGGTTTACCTTTAGAATTGTCTGAGTGACATAGTCAAAAAAATAAAACATTGTATTTTTTTTTATCAATAAAC ACTCTTTTCAAAAGCTTCTACACTTTCAAGAACATTATCCCATATTTTGTCACCAGTATTTGTATCCTAAATGTGCATAA CCTGTTTTGTTCATTTGAATTGGATAAGTCAAAACTCTCTCTGTAGGATAAACTTTGTGGATGCTAATGTTAGATGTATC CCAATTGCTAAAGTTACCAGTTTGATTAATTCCCTTGGTATTACACCTTCCTTTGCTTTTATCAGCAGCCAGAAGATAAC TTCACTGGAGAAGAAAAATACAGTGAGGATGAGGATAGCAATGATGCTGCTGAAAAGGATCAAGAAAAAGATGAAGGGGA TGATGATGTGGTTGATGATGATCAAGATAAAGTAGAGTTCTTATTAGGTGATGATGGTCCAACTACTGCAACAGAGGAGG TACACTTTTGATTTTTCTGAGTCAATAGATTATAGAAATGGATTTTGCAACTTGAAACTTCTTGACTAACCATTTTAGCT TTTCATTTCTAGGCTTGGTTGAGCCAAAATAAGATGACTACATTATGTATTAAAGACATGGGTTTGTTATCACCAAAATC TAGAAGTTACAAAGGAAGCCTTTGTGCTTACAAAGTACTTTTGAATTTTGATGACAATCATTTCAATTCTTCTTACAGGG GGAAGTTCACAATGGTCTGTTCACGAAAGATGAAGATGAAAAGAATATGCCTCCTGCGCGACATTTCAGCCATGGATGTT ACTTAATCCAAGGAATGATGGCCCATGGAATGGAAGACTACGTTTTTGCTAAACACAAGAAGCTCAATGGTTATGAGTTG GGACTGTATGCAATATTTGACGGTCACGCAGGTCGTGATGTTGCAAAATACTTGCAAAGCCATCTGTTCGAAAATATACT AAATGAGGTGCACCCTTTAGAAGTTGGTCATTTTCATTTTACTGGTATATTTTGGTTTCACAATTGCACAAGATCCATGA CATGTTTACTCAGAAGCTAAGACTTCTAATGAGAATTGATTATAGAGCATTTCACCGAGACACTAAACATGCAATACACC ATTATCATTCTCACTAATATTTGATTTATTACTTATGCATGGGAAGCCTGATTTCTGGAAAAATCCAGTCCATGCTGTTA AGAAAGCATGTAAAGCTACAGATGAAGAGATTTTAGAAAACATAGCAGATTCACGAGGAGGATCAACAGCTGTTGCAGCA ATACTAATTAATGGAGTAAAGCTACTGGTTTTCAACGTTGGTGATTCTCGAGCAATATCATGTAAAAATGGTGTTGCTAA ACAACTTACTGAGGATCATGAACCAGAGAAGGAGAGAGATCTCGTTGAGAGCAGAGGAGGCTTTGTGTTGAATAGACCTG GTAATGATAAAATATATTTTCAAGAGTAGACTTCCCATCATTTTTAGATCATCCAAGAAACTAAATTTGTTTTCATATTA CTAAGTCAAGTCTTTGCATCAGACCGGCTATTGTTGAATACAGATTTTTCTATGGAAATCACAAACGAAAAATGAAAGAT TAAGCTTACATCATGGAAGTTCTATCTTTGGGTTACAGATAACTTTTTTTTATGATTTTTCACCAACCTAGTCTTGAGAG TTTGTTTTTTTAGTTCACTGTTCCATTGTTATTTTATTCTTTGAATTTGTGGACTTGAATTGCTCCTTCCAAGTCCAGCA ATAAGGATGAGCTGAATTAATTACCAAAAATATATGATGAAATTAGGGAGTGTCCCAAGAGTGGATGGCATATTAGCAAT GACGCGAGCATTTGGAGATGGAAATTTGAAGGACCACATTACTGCAGAACCAGATGTGATGATTAGGAAGATTGATGAGG ACACTGAATTTATCATTTTGGCAAGTGATGGTCTGTGGAAGGTAAGATTAAATATGCACTTGGCATACAATATGCACAAA TTTTGTCACTGGCAGGACATTACGAACTGGGAGATAATGTTGGCTCCTCTCTATTACAGGTGATGGCAAATCAAGAGGCT TGTGACTGTATCAAGGATATTGAGGATGCCAAAAATGCAGCTAAGAAGTTAGTTAAAGAAGCCAAATCTCAGGGAAGCTA TGATGATATTTCGTGCATAGTAGTTAAATTCTAGCTTATGTGCATTTTTTTGGGGATGTTTGTCTTTGTCTAGTGTGTAT TGTTTTAAATTTCTTCAACTCAAGGGAATGTGTCTTTATAATCTGGTTGAGGGTTATATACGACTCTGTCCAACTACGCT CTACTTATTGCAATTTGTTTAGCCAATCTTTCCCCTATCGCCATTCACCATGCTAAGTAATCTACCACAAATACCTCTTA CACATCTTTTGAGCCTGTCTACAATCAACAAGCAGAACATTTAAGCTTAGTTCTTAGTTCACATTACTAATCTATTTCTA TGATGTGGGAATGCGGTCTGTTCAATGAAATGAAAAAATTTCATTGCAGGGAGAAAATTTCATTGCCTAATGGAAGATTT TCTGCCCATTAGATCTGATCTAAGATCACCAACCAGTTAGACATAATCATTGGTAATATTAGTGGACATCCACTAGTGTT TTAGAACAACCCCAAAGCTTGAACACATTTATAAGTTCAACAGCATATGTTATTGGTCTGTATCAAAAACCAAAATTTCA AATTCAAAACCCATTATTGTTACAGAGTTAAAATTGGCAATTGCTCAGGTACTAATTCTACATAAGCCTGAGTAATAACT AATCTTATCTAGCAAAGAGTTGTAGACTATCCATAAATGATCATATCATGGTGATACTTGCTTGCCTTCTATGTCCTCAA GTCTTAGGGTAACTGCTCGTTTATGTGCATCGAGACCTTCAACTTCCGCCATGGTTGCTACATATGGCCCAAGTTTTCTC AAACCTTCTTCTGTGAGAGACTGCACTGTCATGTACTTTAGGAAAGAATCCAATGAAACACCACCATACATTCTTGCATA ACCATAAGTAGGAAGAACATGATTTGTCCCACTTGCATAATCACCAACGCTCTCTGGTGTCCACGGCCCCAGAAAAACAG AACCTGCATAGGGAATCAATAGGCATGTAAATCTAGGATCTTGAATTGTGTTCAAG
CDS sequence (LotjaGi4g1v0026600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCTCATTCTAACTTGAAGAAAAGAGAGTCTATCTTAATTTCTGATGAGAATCCTGCTGCATTTAAGAAGAGGAG ATCAAGAATGGGAAGCCATGTGGACCCTCTTGTAAGAAAGCCAGAAGATAACTTCACTGGAGAAGAAAAATACAGTGAGG ATGAGGATAGCAATGATGCTGCTGAAAAGGATCAAGAAAAAGATGAAGGGGATGATGATGTGGTTGATGATGATCAAGAT AAAGTAGAGTTCTTATTAGGTGATGATGGTCCAACTACTGCAACAGAGGAGGGGGAAGTTCACAATGGTCTGTTCACGAA AGATGAAGATGAAAAGAATATGCCTCCTGCGCGACATTTCAGCCATGGATGTTACTTAATCCAAGGAATGATGGCCCATG GAATGGAAGACTACGTTTTTGCTAAACACAAGAAGCTCAATGGTTATGAGTTGGGACTGTATGCAATATTTGACGGTCAC GCAGGTCGTGATGTTGCAAAATACTTGCAAAGCCATCTGTTCGAAAATATACTAAATGAGCCTGATTTCTGGAAAAATCC AGTCCATGCTGTTAAGAAAGCATGTAAAGCTACAGATGAAGAGATTTTAGAAAACATAGCAGATTCACGAGGAGGATCAA CAGCTGTTGCAGCAATACTAATTAATGGAGTAAAGCTACTGGTTTTCAACGTTGGTGATTCTCGAGCAATATCATGTAAA AATGGTGTTGCTAAACAACTTACTGAGGATCATGAACCAGAGAAGGAGAGAGATCTCGTTGAGAGCAGAGGAGGCTTTGT GTTGAATAGACCTGGGAGTGTCCCAAGAGTGGATGGCATATTAGCAATGACGCGAGCATTTGGAGATGGAAATTTGAAGG ACCACATTACTGCAGAACCAGATGTGATGATTAGGAAGATTGATGAGGACACTGAATTTATCATTTTGGCAAGTGATGGT CTGTGGAAGGTGATGGCAAATCAAGAGGCTTGTGACTGTATCAAGGATATTGAGGATGCCAAAAATGCAGCTAAGAAGTT AGTTAAAGAAGCCAAATCTCAGGGAAGCTATGATGATATTTCGTGCATAGTAGTTAAATTCTAG
Protein sequence (LotjaGi4g1v0026600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAHSNLKKRESILISDENPAAFKKRRSRMGSHVDPLVRKPEDNFTGEEKYSEDEDSNDAAEKDQEKDEGDDDVVDDDQD KVEFLLGDDGPTTATEEGEVHNGLFTKDEDEKNMPPARHFSHGCYLIQGMMAHGMEDYVFAKHKKLNGYELGLYAIFDGH AGRDVAKYLQSHLFENILNEPDFWKNPVHAVKKACKATDEEILENIADSRGGSTAVAAILINGVKLLVFNVGDSRAISCK NGVAKQLTEDHEPEKERDLVESRGGFVLNRPGSVPRVDGILAMTRAFGDGNLKDHITAEPDVMIRKIDEDTEFIILASDG LWKVMANQEACDCIKDIEDAKNAAKKLVKEAKSQGSYDDISCIVVKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 47 | 47 | - | – | |
| MobiDBLite | 1 | 77 | 77 | - | – | |
| MobiDBLite | 48 | 77 | 30 | - | – | |
| SMART | 111 | 365 | 255 | 9.1E-79 | ||
| SUPERFAMILY | 118 | 367 | 250 | 5.1E-68 | ||
| PANTHER | 118 | 367 | 250 | 8.0E-115 | – | |
| Gene3D | 118 | 367 | 250 | 5.4E-74 | ||
| PANTHER | 118 | 367 | 250 | 8.0E-115 | ||
| CDD | 120 | 367 | 248 | 1.68227E-83 | ||
| ProSiteProfiles | 121 | 367 | 247 | 45.563 | ||
| Pfam | 149 | 360 | 212 | 4.6E-55 | ||
| ProSitePatterns | 153 | 161 | 9 | - | ||
| Coils | 334 | 354 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi4g1v0026600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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