Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0028400.5

Overview

Field Value
Gene ID LotjaGi4g1v0028400
Transcript ID LotjaGi4g1v0028400.5
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT3G48750.1 cell division control 2; Swiss-Prot: sp|Q05006|CDC22_MEDSA Cell division control protein 2 homolog 2; TrEMBL-Plants: tr|I3T768|I3T768_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0028400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:3539799..3543901) extracted from Lotus japonicus Gifu genome v1.2.

CAACAAAACCTGCTTAATTCAGTTCCTTTAATTATGTTGCTTCATTTACTTCATATATTGTTGTCCTGATGTTATTCTGG CTAGCCGTTTCTTTATTGGGTTATTTACGGATGGTACTTATGTGGATGACAGGTTGCAGGATGTTGTGCACAGTGAGAAG CGATTGTATCTGGTTTTTGAATACCTTGACTTAGATCTAAAGAAGCATATGGATTCTTCTCCAGAATTTTCAAAAGATCC ACGACAAGTAAAGGTGTGTGTGACATCTCTATTTTTCTTTTCTTCAGCTATTTTTGTGCTTTTTGTAATGAAAAGTTCAA TTTTTATAAGAGTGAGCAAGAAATGCAACCCAGCCATTGACTGTATGGTTTTACTATCCTCTGTCTTGTCTTTCCATTAA TTAAATTAAACATATATGAGAACTAGTGATGATTAAATAACATTATGGTTGGCAACATAGCTATAGCTTGTCAAATGCAT GTCTATGCATATTATACATGTCTCATGAATTTTGTGATGAATTACTAGTTATGTGGATAGCAATTAATTGGTATGACTTT TCCCATAAAAGTTCCCTATTTCCGCAGACGAGTGATGGATTGGTTAAGTTTGGCCTTTAGCATTCTGACTGGGACTGTTA AGTGCTTTTTGAAACTGAAGGTTCTTTGTGGAATTCTCTGTTCTTAAGAAACAATAAACTGGGCGAATAGGCTAATTGTA TCTTATTCATTTTCAGATTTTGGTTGCATGTTTGTTCAAATATTATCTGAAGTAACTTTGTTGGTTCAAATCATTGCAGT ATGGCAATAAAGATACTTATGGACTTACAAATTGTTTATTTATGTATATTTTCCTCCCCTTCTCATTGCCTACCTCTTCA GTTTTGAACTATATGAGCATGAGCATCTTTGCATGTTTGTATGTTTATCCTGACTATATATTTCCACATTATCATATATC AGTAATATGAATATATTTACTCTTGGATTCAAAAAGAGATGATCTTATTCTGGCTTGTGCAGATGTTCCTTTATCAAATT CTTTGTGGCATTGCTTACTGTCATTCACATAGAGTTCTTCATCGAGATTTGAAACCACAGAATTTATTGATAGATCGCAG CAACAATGCTCTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGAATTCCTGTTAGAACATTTACACATGAGGTTT GTTTGCTACCTTATATTGGCTTTTGGTCATTTGTGGAGATAATCCAATTTGTACATTTACATCAAAACCTCAAGATTTCT TTTAAATTATGTGTGAGGGCCGAGGAAGACCAATAATAGTGGCTTTATCTTTTCTTCTTCATTATTTAGTTATTATTAAA TTGAGGAGAAGATTATGGGAAACTTGTGTAAGGTGGTTTGCTTATGCTAGACAGCTAGAGGAAGACCAATAGTAGAGGCT CTAGTTCTTTTTTCTTCTTCTTTATTTACTTATAATTTAATTGAGCATAATAGAGGCTTTAGTAGACCGCTGATTTGTGA AAAAAGTGGACCGAAGGACGATGACTAGATTAAAAAAGGTTGGGGGGGGGGGGGTGAACTGGGAAAGCTATAAGAGAGGC TAATAAGAATGACCTTTATCTCAGCGGGTTTGCTGAAAATTTGGATTCTAATACTTGATAGGACGCAATTTAAAATCCTG AATAGAATGTTAATTCCTACTGTTCTCTCTAGGGATAACGTGAACTTAACCATAGTGTGGTCATAACTGACTCATAGGAA ATCAATTTTCTTCATAAGTTTTCATATTAACATAAAGAAGTTTCATCTTACAAACTCTGAAAGATTATTGATATGTTTTA TATTATGCATCTACTAATGTTGAGAACTTGAGATTGTCGCCTTTCTCATAAATTTGAATATTACAATACATGAAATATTT AAGTTGATATTGGCAGTATGAATTCTACAAGTAATCCCGTGCTCCATGTTCTTTTTGCTATTTTTATGTACATACTACAT ATTAGTTTTAGTGTGTAATCTTCATTATTATTTTTTCCGAATGAAACAACTGAAGTTGTTAAATTGTTACTAAAGAGATT GATATACAAGATTAGATTCTTTAAGTAGCTTAAATCTTGTGAAAAGTAAAATGGTAGTTGAACTCTAAAAAACATAATAT ATATTCTTGTTTTTACATTATAGTTTTTCTGATTTGTTGTAGGTGGTGACATTATGGTACAGAGCTCCAGAAATTTTGCT TGGATCCCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGCATATTTGCAGAGATGGTAAACCAACGACCTC TATTCCCTGGGGACTCTGAGATCGATGAATTGTTTAAAATATTCAGGTGAATAGATTTTTTGTGATAAATTTCAGTTATT TTGAAATCATATTGAATTCTGCGAGCTAAGAACTTATCAAAGAGTTCCCCATAAATTCCACTAACAGTCTCTATACTTAA ATTGGAAGTATGAGACAGATATGTACTGGGATTTTGCAACTGTACATCAATCTTAATAATAGGGATTAGGGAGGTTGCAA ATATTTTCTCAATTTTTAATTGATAGAGGTTGTGATGGGAGAATCTGAACATATATATGTAATGCTTTTAAGTATCTATG CAAGTAATATGAATGATTAGCTAAAAGAGTTTTACCAAGAGCTAACTATTTCAGATATCAGCTATGTGATGACCCCTAGA TGCTTTTAGTGCTTTCCAAGGAAGATTATGATTTCAAGGATCTATGGAATTTTTAGTTGCATATATGATAGTGCATAATG AATGCCTTTGAGGTAATCATCTTGGTTTCGGTTTTAAATAGTTTCTTGGAATGATTGACAGCTTGACAGGGTCTTGCAGG TGGCTGAAGGGTAAATCAGGCACCAGCCTAAAGCACCTATATCAATAAAGAAAAAATATTAGAATTTTTTATTTTATATA ATACTTGATTTGATATTTTACATTTTCATATTATAAGAGCTGGGGTTATTATATATTTGTCTGGTCTACACTTCACCACA TCTGGTTTTTGGATTTTTTTGTGCCTAAACCATTTTTATATATAGTTTTCTTTTGCTGTAAAGTATTTTGATTAGACATC TACTACTGCTTGAGGGATGTAAGCATAGTTTGGTAACTTGTAGTTGTAGGTGATTGTCAGCCAAAGCTGTAAACGTTCAT CATATTTTTAATTAAAGTTCCCTTTTAATTAAACTTTTTATCTAGAGGCCATTATACTGTAGGTATTGCAATCTATATAA GGGGAACAATATACTTTTGCTTCCAAACTGACATGTCACAGATAAATAAACAATGCTATATAGTATGCGTAAATATTTAC ACATCTTTCCTTATATGAAGAATCATGGGCACACCAAATGAAGATACATGGCCTGGAGTGACTTCATTGCCTGATTTTAA ATCAGCCTTTCCCAAGTGGCCATCTAAGGTAATTAAATGGATGCTTGCCTCTAACTTGCATTGATTAATGTTGGTTTTTC ATTGCTATGTTTAACTTAATTTTGCATTTTGTAGGACCTGGCAACTGTGGTCCCAAATCTTGACTCAGCTGGTCTTGATC TTCTTTCTGTAAGTACAACATTAGATATATTATCTGTAAAATGATAAAATAAAGGATATATTTCTCTATAATGGTGATAA AATGAAACCAAAGGTTATTTGTTTTTCATCAGAAATGAAGAGACCATACTTTTTGTTCTTTTGGAAATGGATGTAAGATT AGAAATACATTCTGAAGCAGAAACTCTTTACTACCTTTATAGTGGGATTATATGGTAACAATGTTTTCTAAATGAAAGAT CATATTTGAATTTACTTCATATGATTTTTTCAGTCCTCTACATCAGTCCAAATTTTGCATTTTTTAAGCTGTCTTCACTT TAGATACTAACATGCAAGTTTATGCCCTTGCTAAAAGTGGTTTTCATTGATTTTCTTTGTTGCTTACCTTAATGTGTGTA ATATGTATTACAGAATATGCTTCGCTTGGATCCCACCAAAAGAGTTACTGCCAGGAGCGCTCTTGAGCATGAATACTTCA AAGATATTAAATTCGTACCATGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0028400.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATTCTTCTCCAGAATTTTCAAAAGATCCACGACAAGTAAAGATGTTCCTTTATCAAATTCTTTGTGGCATTGCTTA CTGTCATTCACATAGAGTTCTTCATCGAGATTTGAAACCACAGAATTTATTGATAGATCGCAGCAACAATGCTCTAAAGC TTGCAGATTTTGGATTGGCTAGGGCATTTGGAATTCCTGTTAGAACATTTACACATGAGGTGGTGACATTATGGTACAGA GCTCCAGAAATTTTGCTTGGATCCCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGCATATTTGCAGAGAT GGTAAACCAACGACCTCTATTCCCTGGGGACTCTGAGATCGATGAATTGTTTAAAATATTCAGAATCATGGGCACACCAA ATGAAGATACATGGCCTGGAGTGACTTCATTGCCTGATTTTAAATCAGCCTTTCCCAAGTGGCCATCTAAGGACCTGGCA ACTGTGGTCCCAAATCTTGACTCAGCTGGTCTTGATCTTCTTTCTAATATGCTTCGCTTGGATCCCACCAAAAGAGTTAC TGCCAGGAGCGCTCTTGAGCATGAATACTTCAAAGATATTAAATTCGTACCATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0028400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDSSPEFSKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSNNALKLADFGLARAFGIPVRTFTHEVVTLWYR APEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRIMGTPNEDTWPGVTSLPDFKSAFPKWPSKDLA TVVPNLDSAGLDLLSNMLRLDPTKRVTARSALEHEYFKDIKFVP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24056:SF371
1 201 201 2.9E-118 –
PANTHER
PTHR24056
1 201 201 2.9E-118 –
ProSiteProfiles
PS50011
1 197 197 33.305
IPR000719
SMART
SM00220
1 197 197 7.0E-29
IPR000719
Pfam
PF00069
10 197 188 4.2E-52
IPR000719
SUPERFAMILY
SSF56112
10 200 191 2.97E-69
IPR011009
Gene3D
G3DSA:1.10.510.10
11 200 190 2.7E-74 –
ProSitePatterns
PS00108
33 45 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0028400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…