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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0030800 |
| Transcript ID | LotjaGi4g1v0030800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WAT1-related protein; TAIR: AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|Q4PT23|WTR6_ARATH WAT1-related protein At1g25270; TrEMBL-Plants: tr|V7BR58|V7BR58_PHAVU WAT1-related protein; Found in the gene: LotjaGi4g1v0030800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3833835..3837373) extracted from Lotus japonicus Gifu genome v1.2.
AGACTACACAGGTACAACGCACTCTCCTGTTTTCAGATACACGATCACGATGTCCAACCTGGGTCAAATGCTCTGTACTA GAGTAAACCGGAATTTAAGGCTAAAATAAATGCATGCTTTGTTTTTTCAACTTGGAACCAATTCCAGTACATTTATCATA GAGCATGTTATGCACAAATAAATATAAATCCACTTTGTACATTGTTCTATAGAATTTCCGTATGTCTTAATTATTTTCTC TGTTCCCTTCTTAAATCTGTCTAAGACAATTCACAACAGCAAGCAAAATGAAAGGTTTATGGGTAGGGTTGCAAGGGTTG AGCCCTGTTCTGCTAATGGTGGCGGTTCAGATTGTTTATGCTTCTGCAAATGTTCTCTACAAGGTTGTCTTAAACGATGG AATGAGCGTTAGTGTAATCACTGCCTATCGCCTCATGTTCGGTGCTGCTTGCACTATTCTTCTTTCTCTTATTTTTGAAA GGTTCATTTATTCATAACCCCTGTTAATTGCTTCTCTAGTTTTGCACACAATCCCTTCATTGTCTTCCCATCTGTTTTCC CCTCAAAGCCTCCCCTTCTCTCCCCTATAAACTTGCAAACACATTTTAAACTATGTAGAAATATATCTTAATTCAGAGAT CTGATAAAAGCCCTTTCAATTATATGATTTTTGTATAAAAAAAAAATTATTCTCAGTTCATTCCCTATAAACTTTGTAGA TTTTTCCACATTTTATTTGTGTCTCCAACAATAAAATCATGGATATGCACTTGTGTTGGGCTCGCATATTAAGGGCTAAA ATGAACATGCATAGTGTTTTGTCCTCTAATTTAATTTTTCTGTTCTTTTTTTTTTTAATTTGAAGCAGAAAGAACAGGCC AAAGCTGACATGGAGGGTGCTTTTCATGACATTTCTTTCCGGCCTATTTGGGTATGTCTGATCTGAACTCTTCAGTCTTC ATCTCTTTTCCTGAGAGGTATTTCTTTTAATTATTGGGCATGTATTGCTAAATTGTATTGTACATATTGTTTATTTGTAG TGATTTTGAACATTGGTTTATGTTTAATAATGATATAAACAGAGGGACTCTATTCCAAAACCTCTTTGTCAATGCTATCT CTCTGATATCAGCAACATTTGCTACTGCCATTTATAATCTCGTTCCTGGAATCACATTTATGTTGGGCATCTTTTTCGGG TACCTATTCACATTTTACAGTACTTCAATCTTTTTTTATCTTCTTTTATAATTAAGAAAAATGAGTGAAGCGTTAACTTG GTTCCCAAGAGTTTTTGTGCTTGAAAAGTTAGTTCCTAAAAAATAATGCATTCAAAAGTCTTTGAACATGTAAAATATCA GTCAAATTAGTCCCAACATCGGCTAACTTGACTGATGTTCTAGTTGATCAATATGTCAACTGCAAAAATTTCAAACACAA AACTGAGCATATACTTCAGAAAATTGATAACTACTCAAGTCCGTCAAATTAGTTTCTAATTGACGTTTTAATTAATTAAT TTGATTGGCATTTTATGTAGATTGAACTTTTGAATGTATTTTCTTCTTATAGGTACTAACAAAATGTTTTTGGAACCAAG TTGACATTCACTCAAGCAAGACAGGCACTAACTTGCCATTGACAATATGTTTCTGGAACCTAGATGACATTCACTCAAGA AAGATTGATAAGTACTAAAGTTCTTTTGAAATTTTCAGCTTCGAACAGTTAAACATAGGAAGAGCAGCAGGGCAGGTGAA GTTGTTGGGAACAATAGTTGGAATTGGTGGATCAATGCTGCTGACATTTTTCAAAGGGGCAGAAATTCACATTTGGACCT CCCACATTAATCTTTTGCATCAAAATCAAAATGGCCACGGAGGAACACAGAATGTTGACACTAGAACAAAAACAATCGGT GTTTTATGTGGTATTGGAAGCTGCATAAGCTTTTCATTCTGGCTCATCATCCAGGTAAATTCATTACACACTTCTATCTA ACTTATCACATGATCAGGCTGTAACGATATTCTTGTTTTCACTATTGACCACCCTATAACGCACAGGCTAAGATTGCTAA AGAATATCCAAGACAATACACAAGCACGGCCTTGATGACCTTAATGGCGGCAATACAATGTACTGTCTTCGCCCTTTGGG TTGAGAAGGATTGGAGCCAATGGAAGTTAGGTTGGAGTCTTAGGCTTCTAACCGCAACTTACTCGGTATGGTGATCATTT TAGTCCTTTTCTCAATTCCATGTTTATGTGCTGCCCTGGTAGGTTTCAGTTGGTTTCGTTGCTCACTTGAGAGACTTTTG TTCTAAACTTTATGAATATTATAAAATTAATTTTTGTTTTCAAAAAAATGCTAATTGTTCTATTACATTGTGGTTGGATG GGTGAACTAATATTATGCAACAATGATATTGAAACATGTAACTTTTGCAGGGAATTATGTCCTCTGGAGTGGTGTATGTT GCCACTGCATGGTGTGTACGGGTGAGAGGTCCCATGTTTGCATCTGTTTTCAACCCTCTTACCCTTATTATTGTGGCTAT TGGTAGTTCCCTGGTTTTGAATGAGAAGATATACTTAGGAAGGTATACATTAATATGCTTTTTAGAGAGCTTATGACCTA CATAAAAGTTGTTTTAGCTTATTTTCATAAGGTGTTCAAAATAGCTAATGAATAAAAATCTATGTTTATTCATAACATAT TTTCAACTTATTTTAGTAAATTTTTTAAATTAGTTTATGAATAAGCGTATTGTTAAACCGTTTTCTCAAACGCATTCTAA ACTCAATAAGTTACAAGTAGTGTATTGATTGATGTACCATTTATTTTGTGGTATATAGTAGAATGCCCCATATTGCAATT GAGAAAGTACAATATGTTTGACTCACTCTTGTTATTTTTTTGAAACATGTTATAGTGTTATCGGAGGAGTGCTAATTGTG TGTGGCTTGTACATGGTGCTTTGGGGTAAGAGTAAAGAAACAAAAAAGAGGAAGGACTTGGTGTCAGAAAATACCCAAGA AGTTGAAGCTACTGATGTTGTTTCCATACATCATGGCAATTGTGACACCAGCAACAATAGCTGCACCAATAGTAAGAGCA ATAATAATGTTGTTTCAAAGTTTCACGATGAATCTTCTAAAAGTGAGCATCAACCAAATGGCATTGACAATGAGGGGGCA CAAGATGTAATGGCTTCAGGGGAAATCTCTAGAGAGGATACAGAAGGCTCAGGACTATCAGCACCTTTTGGAATTGAACA AAATCTGCATAAACCTGCTGCTTAAATCCTAAAATTTAATCTTGTGAGTTTTGAATAACTTATTTGAAGTCATGGCATAA ACATTCGTGCAAGTGTTGGTTAAGCGTATAAAGATAGTTTATCTTGCATTTGTAAATTCTTTTTACTTTATTTTTATTTA TTTTCCTAGATTACCTTATAAATTAAGGGCTAGACAGATGTGAGTTAATTTTTGTAATAATATAAATAAAGAGAAATTCA ATCCTTATTCAATTGAAAA
CDS sequence (LotjaGi4g1v0030800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGGTTTATGGGTAGGGTTGCAAGGGTTGAGCCCTGTTCTGCTAATGGTGGCGGTTCAGATTGTTTATGCTTCTGC AAATGTTCTCTACAAGGTTGTCTTAAACGATGGAATGAGCGTTAGTGTAATCACTGCCTATCGCCTCATGTTCGGTGCTG CTTGCACTATTCTTCTTTCTCTTATTTTTGAAAGAAAGAACAGGCCAAAGCTGACATGGAGGGTGCTTTTCATGACATTT CTTTCCGGCCTATTTGGAGGGACTCTATTCCAAAACCTCTTTGTCAATGCTATCTCTCTGATATCAGCAACATTTGCTAC TGCCATTTATAATCTCGTTCCTGGAATCACATTTATGTTGGGCATCTTTTTCGGCTTCGAACAGTTAAACATAGGAAGAG CAGCAGGGCAGGTGAAGTTGTTGGGAACAATAGTTGGAATTGGTGGATCAATGCTGCTGACATTTTTCAAAGGGGCAGAA ATTCACATTTGGACCTCCCACATTAATCTTTTGCATCAAAATCAAAATGGCCACGGAGGAACACAGAATGTTGACACTAG AACAAAAACAATCGGTGTTTTATGTGGTATTGGAAGCTGCATAAGCTTTTCATTCTGGCTCATCATCCAGGCTAAGATTG CTAAAGAATATCCAAGACAATACACAAGCACGGCCTTGATGACCTTAATGGCGGCAATACAATGTACTGTCTTCGCCCTT TGGGTTGAGAAGGATTGGAGCCAATGGAAGTTAGGTTGGAGTCTTAGGCTTCTAACCGCAACTTACTCGGGAATTATGTC CTCTGGAGTGGTGTATGTTGCCACTGCATGGTGTGTACGGGTGAGAGGTCCCATGTTTGCATCTGTTTTCAACCCTCTTA CCCTTATTATTGTGGCTATTGGTAGTTCCCTGGTTTTGAATGAGAAGATATACTTAGGAAGTGTTATCGGAGGAGTGCTA ATTGTGTGTGGCTTGTACATGGTGCTTTGGGGTAAGAGTAAAGAAACAAAAAAGAGGAAGGACTTGGTGTCAGAAAATAC CCAAGAAGTTGAAGCTACTGATGTTGTTTCCATACATCATGGCAATTGTGACACCAGCAACAATAGCTGCACCAATAGTA AGAGCAATAATAATGTTGTTTCAAAGTTTCACGATGAATCTTCTAAAAGTGAGCATCAACCAAATGGCATTGACAATGAG GGGGCACAAGATGTAATGGCTTCAGGGGAAATCTCTAGAGAGGATACAGAAGGCTCAGGACTATCAGCACCTTTTGGAAT TGAACAAAATCTGCATAAACCTGCTGCTTAA
Protein sequence (LotjaGi4g1v0030800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGLWVGLQGLSPVLLMVAVQIVYASANVLYKVVLNDGMSVSVITAYRLMFGAACTILLSLIFERKNRPKLTWRVLFMTF LSGLFGGTLFQNLFVNAISLISATFATAIYNLVPGITFMLGIFFGFEQLNIGRAAGQVKLLGTIVGIGGSMLLTFFKGAE IHIWTSHINLLHQNQNGHGGTQNVDTRTKTIGVLCGIGSCISFSFWLIIQAKIAKEYPRQYTSTALMTLMAAIQCTVFAL WVEKDWSQWKLGWSLRLLTATYSGIMSSGVVYVATAWCVRVRGPMFASVFNPLTLIIVAIGSSLVLNEKIYLGSVIGGVL IVCGLYMVLWGKSKETKKRKDLVSENTQEVEATDVVSIHHGNCDTSNNSCTNSKSNNNVVSKFHDESSKSEHQPNGIDNE GAQDVMASGEISREDTEGSGLSAPFGIEQNLHKPAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| TMHMM | 3 | 25 | 23 | - | – | |
| Phobius | 4 | 16 | 13 | - | – | |
| PANTHER | 10 | 344 | 335 | 2.0E-144 | – | |
| PANTHER | 10 | 344 | 335 | 2.0E-144 | ||
| Pfam | 12 | 140 | 129 | 3.0E-13 | ||
| Phobius | 17 | 25 | 9 | - | – | |
| Phobius | 26 | 40 | 15 | - | – | |
| TMHMM | 40 | 62 | 23 | - | – | |
| Phobius | 41 | 63 | 23 | - | – | |
| SUPERFAMILY | 47 | 156 | 110 | 2.62E-7 | – | |
| Phobius | 64 | 74 | 11 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| TMHMM | 75 | 94 | 20 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| Phobius | 100 | 126 | 27 | - | – | |
| TMHMM | 104 | 126 | 23 | - | – | |
| Phobius | 127 | 137 | 11 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| TMHMM | 138 | 156 | 19 | - | – | |
| Phobius | 157 | 190 | 34 | - | – | |
| TMHMM | 190 | 209 | 20 | - | – | |
| Pfam | 191 | 329 | 139 | 9.7E-14 | ||
| Phobius | 191 | 209 | 19 | - | – | |
| Phobius | 210 | 220 | 11 | - | – | |
| TMHMM | 221 | 242 | 22 | - | – | |
| Phobius | 221 | 242 | 22 | - | – | |
| SUPERFAMILY | 230 | 334 | 105 | 1.22E-10 | – | |
| Phobius | 243 | 261 | 19 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 262 | 279 | 18 | - | – | |
| Phobius | 280 | 285 | 6 | - | – | |
| TMHMM | 286 | 305 | 20 | - | – | |
| Phobius | 286 | 304 | 19 | - | – | |
| Phobius | 305 | 309 | 5 | - | – | |
| TMHMM | 310 | 330 | 21 | - | – | |
| Phobius | 310 | 330 | 21 | - | – | |
| Phobius | 331 | 436 | 106 | - | – | |
| MobiDBLite | 369 | 436 | 68 | - | – | |
| MobiDBLite | 369 | 383 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0030800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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