Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0032700 |
| Transcript ID | LotjaGi4g1v0032700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin family protein, putative, expressed; TAIR: AT3G19720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q84N64|ARC5_ARATH Dynamin-like protein ARC5; TrEMBL-Plants: tr|A0A072UN67|A0A072UN67_MEDTR Dynamin-related protein 5B-2; Found in the gene: LotjaGi4g1v0032700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3996500..4004237) extracted from Lotus japonicus Gifu genome v1.2.
ATAGCTAACACACAACACAACACAGTACTACAGTGTAAGCTGAAATCGGAAAAATGGAGGATGAAGGCGGAAGAGAGGAG TGGCGTCTCTACGAAGCTTACAATGAGCTCCACGCGCTTGCCCAGGAGCTCCACACCCCCTTCGACGCCCCCGCCGTTCT CGTCGTCGGCCACCAGACCGACGGCAAGAGCGCCCTCGTCGAAGCCCTCATGGGCTTCCAGTTCAACCACGTCGGCGGCG GCACCAAAACCCGCCGCCCCATCACCCTCCACATGAAATACGACCCTCAATCTGACTCCCCTTCCTGCTCCCTCGTCTCC GATTCCGACCCTTCTCTCTCTCAACAACTCTCCCTCCCTCAAATCCAGGTTCAATTACACCATCTTCATCCTCCTCCTCC AAAATCCTAACTAACTAACTAACTTGTAACCGTTTTTAACCGTTTGTAACCGTTTTTCAGGCATACATTGAAGCTGAGAA TGCGAGGTTGGAGCGTGACAGTTGTCAATTCTCCGCGAAGGAGATAATTATCAAGGTGGAGTACAAGTACTGCCCTAATC TGACAATTATCGACACGCCTGGGCTCATCGCGCCTGCTCCGGGGAGAAAGAATCGAGCACTGCAGGCGCAGGGCCGGGCG GTTGAGTCTCTAGTCCGGGCTAAGATGCAGCACAAGGAGTTTATTATACTCTGCCTTGAAGATTGCAGTGATTGGAGCAA TGCAACTACAAGGCGTGTTGTCATGCAGGTAGTTGTTAGAAATAGTAATATAAAACCATTCATGTGGTCCTTACGTAACA GTTTAAGCTTTTGGGATAATTGGTTCATTGGCAGTAATATTGCAATGTGGCCATTGAAGTTGTTGTTCGAGTTGCAATGC AATTGGTTTTTTAATTGTTGTTGATTTTGTAGATTGATCCTGAGTTGTCGAGGACGGTTGTTGTATCGACTAAGCTGGAT ACCAGGATACCGCAATTTGCGCGTCCCTCGGATGTTGAAGTGTTCCTCTCTCCGCCTGCGTGTGCGCTTGATGGGTGCAT TCTGGGAGACTCTCCCTTCTTCACGTCTGTGCCTTCGGGAAGAGTTGGTTCTGGGAGTGATTCTCTGTACAGGTCCAATG ATGAGTTTAAGCAGGTTAAGCCTTCATAGTTCATAGTACTTTTTCTTAATCCTGTTTTATTTTTCATTTCAGATTGAATT GGAAGCTTAATTAATACTCTGATTGTTTTAGCTTAGAATCTTTTGGTGCTTTTGTTATGATTTCATGTGCTCATTGTAAT CTTTAAGTACCTTTATTCCGGTTTCCATGTTTGTTGTGCATTTCTTTTTCGTTACTTATCTTACTTTCTCATTTTATTTT TCGGTGTTCAATTGTGCATATAGATTCTCTTATTTTGTTATCTGCTATAAAATAAAAATCACTACGTTTTGTGCTAGTTA GGATTGTTCGTTAGAGCTAGTTTGCTTGGAATCCTAGACAACGAATGAAAGGTCATACATAGAGGATTATCTTCACTTCA TGAAAGGAAGCTACTCAACTAGCCCCTAGTTAGCAGGGAACCTCTTGGTGGAGGGATGGACACTGTGTAGGTCTCATATA ATGTCCTCTGCAACTAGAAAGCATGGCAAAATGCTATGTATTGAATGATACACTTTTCAATGAACTATTTTCATTTCTCA ATTCCTAAACCAGTGCCTTGGTTAGCAAGACCCAAAAAGAAATAATGAATAAACAAAGTAAAACAACACAATGGTTGTAT TAGTTTTCATTTTTTATTTGTTTGTAGTTCCCTTGGAGGATCCATCATTTCCCTATGACTATGAGTTTAACTTTTGGTGC AATGACAGCTATCTTCTAGGGGCTTTTTCTTTTGATTTGTGGAACATGAAACACAGAGTTTTCTTTCCTTGATATATTTA GTTGTTATAATGGATGCAGGCAGTATCCTTGAGAGAGATAGAAGATATTGCTTCTCTGGAGGAGAAATTGGTCAGGCCAT TGTCAAAGCAAGAAAGAAGTAGGATAGGTGTGAGCAGACTTAGGTTGTTTCTGGAAGAAATGCTACAGAAGAGGTTTTGA CGTGTTGGAATTTTTGTTTTTGTGGTTTCTAAAAGAAGCTTCATAAGTCCATTTATATATATACTCTGTGGCTAAATCCT TAAGAATGATCTTGCCAGGTATATAAATAATGTACCGTTGATCATTCCACTTCTTGAGAAGGAGTATCGGAGTGTGACAA GGAAATTGAGTGATATAAGTCAAGAATTGAGGTTGGTATTAAAGTTTGAAATATCTTTATTGTACATGATCTTCATATGA AAGAGAAGGGATGTTAATTTTATATATTGTTATCTATTTCTATGTTCGCTTTGTCACTTGTTTTATTCTTTCTTCAAATT AAATACAGTACACTGGATGAAGCCAAACTGAAGGAGAAAGGAAGAACTTTCCATGATTTGTTCTTGACCAAGGTCTTAAT GTCACAGATTCAATTTTCTTCTCATTATCTGATCCTGCTTTAATGGATGAAATTCCTTTGTTGGTGAATGTTAGAACTCC TAGCAAGGGAAGGATTATTTAATCTGGATGTTTAGCTTGTCGAGTAAATTCATTTGTTTATCAAATATTCTATATGAACT TGCATATGCCTGCCTTTCGTAAATTTTTCCAGCTGTTAGAATTCATACTTTCTTCTATATTTTTTCGTCCCTGACTCACA TATTTTCTATTATTCAGTTGTCATTACTTCTGAAAGGGACGGTTGTTGCACCACCTGATAAGTTTGGTAAATTACCTTAG CTCCGTTTTTATAGATATGCCTTGGAATAGTAAATAATGCTTAATGGAAAAAGAAAGCTTACTTTACTTGGATATCTAAT TTTCTTTGGCAAATGAACACTGTTAAATTCCTTCATGTTCTTTTTGTTTTGTTTCAGGTGAAACACTACAAGATGAGCGA ATAAATGGAGGTGCATTTGTTGGTGCTGATGTTGCTCAGTTCCCTCACAAGCTAATACCTGTAAGTTATACTATTGTTTT GGGCTTGCTTTTCTCTAAACTTGTATCCTGCTTCATTTTTTCATTGGGGAGAAGAGCAGACTGCCTATTCATTTTATTTC ACTATTTTTTCTTATGAAAATATGTTTATTACTTTCATTTCCGATTTCTTTTGGCTGATGATTTCACTTGTTCATATAAA TTTCCACTTTCACATGTTTTATATTTTGTGTGGTGGGTCATTGTGCGAAAGCTTTTTCAGAATTAAGTTAAGCAAACATT TGACAGGCTGACTTCCGTTTGTGTGTAGAATGCAGGGATGCGTCTTTATGGTGGTGCACAATATCATCGGGCAATGGCCG AATTCCGTTTTGTCGTTGGAGGAATCAAGTGCCCTCCAATTACTCGGGAAGAAATCGTAAATGCTTGTGGAGTTGAAGAC ATTCATGATGGAACAAACTACTCTAGGTAATTGTGTGTTTTATCCATTCATTTTTGTAATTCTACGAAATTACTATTTGA TGAAGATTGAAAGAATTTTTATTTTGAGCAACCAGGACTGCCTGTGTAATTGCTGTTGCAAAGGCTCGTGACACATTTGA ACCTTTTCTTCATCAGGTGATTAATACCATTAGAGTGAAAATATTCCTTGCAATTACTTTCTTTCATTTTTTAAATTTAT TATGAATACTCGTCAACTTGTACCATTTCCATGTGATGTATTTATTTTAACAATGGCAATTTAGTCCACTCAATCACAGT TTGTGACTTTGTGTGTTCTAAACAAGGCAGGAAGAAACTTTGTAATTTTTTTTATAAACTCCAATGGCAAGACTGAAATC CCTAATATAGGTAATAAGCCTTATTTTTGGGTTACAAATGATGTCCGAGGCCCCAGTGTGAGAAAATAGCCTCAGTTCGA TTTGAACTCAAAATCAAGTAGCTCACAAAGAGACTTTGTGCCACTAAAGCTAAGGCTGGTGGATGTTAATAAGCCTTATT TAATGGGCTTAAACAACCTTAATCCTAGTATACCAAGTAAACCAAACTTAAGAAATATATTCCTTATTCAAAATGAGTAA TAAGGTTCTCTATAATGCTTGAAATAATATTGCATGTTCTATGCTATGCTTTAAGTACTGGTTTCTATTGATTTCTACAT ACCCTTCTTTTCACGATACTACTAAGTGCTTTCGTTAAAATCACTAGGCTGAATTATGAGAATTTGAAGAACCTTGTCCC CCTACCAAGAGAAACAAGGGTATCACGGGGGAAGATGTCCCTGAGCTGCATAACTAACCGAATAGTTATGTCAGTGATCA GAAATTGAAGAGAGTTGGGGAGAAGTTGCTGGACTTCTCGAATTCAGCCTTGTAGTGTGTACTATTGTATCCTTCCATAC CAAGACTGTCATCACATTGGTGTAGTCTTGGCTTGGCATTGATCAATGAAAGATTGTTTGACATAAATAAGCATGATGAA ATTTAGATGCCCATTTGTTCAAAAAATTATTTTTTATGCAATTCTTTATTCAGAAATGTGGTTTTTCATAATTCATGTTT AGTAAAGTTTTATTTTTTAACTTTTGATGTTTTGGTTCCCTAACTAATTTATTAATTCTCTGTTCTTGACACAGTTGGGA TGTAGATTGTTGCATATACTCAAACGATTGCTTCCAATATCTGTTTTTCTTCTTCAGGTATTCTCTTTGTTTTTGTATAC TTTTGTGAGATATAAACCTGTTTTTGAGTTTTCATCCAGCAGCTTAAGCTCTTAGAATAATTAGTTCTTGACATGACATC AAGAGCCTTTATGAAGAAGTGATCTAAAGTTTCATTCTTGCCACTCCTTTTTTATTGGTCAACTATTCTTGCCACTTTTC TTTGAAAGTATTAGAATTTGGGAGGCCTAACTTAATCCAAAAGCTAGCTCAAGAGTTGAGGGTTATTCTACCCTTTATAA AGGCTATCTTGGCCATATTTTGAGTCAATGTGGGACTTCTCAATAGAAAGAAAATTTAATTTTCTTACAAGGTAGGGTGG GCAGACATAGTCTTCCTTGCAAGCCTAAATGGCTCTTACAGAGGGTTGTGCAAGATATAAAATCATTAGTCTTAATAGCT CACGTTTTTGAGGTAGTTGATTTTTGACATTTTTATGGATCAGTTATTTATGCATTTTTGTTAACAGTTTCCTTCCTGCA ATTATTAGTTGCTACTTCCCAAACTTATATTATGCATTTGGTTTCTGGCAGAAAGATTGTGAATATCTAAGTGGTCATGA GGTGTTCCTCAGGCGTGTTGCCTCTGCCTTCAACAACTTTGCAGAGTCTACTGAAAAATCATGCCGTGAAAAGTTAACCA CCACTTGTCCCCAATCGCTATAAGTTTCTTTCCATTTGTCACATTAAATCATGAGCTCCCCCCAAAAAAACACCCAAAAA AATTAGCTTCTTGTTATTTTGGGAAATTTTGTTGACCTCCCCCCCTTTGTTTTGAAATTATAGGTGCTCCTTTTAAGGGT AATTTTCATATGAAAATAAAAGTACAAGGGCGTGTTTGGTGAAAATTCAATAGAGGCTAGTAATTTTTCTAAAACTGGAC GGTAATTTCATCAAATATCAAATCTCAAATCTCAAATCTCAAGGTGGGTTGGCATAATTTGTCCTTCATTTTTTTTAAAA TTTATTTGGGTTAGTTTACAATCTATTGTAGAGCAAAATATTGACAACATACTATGGTTGAGGAAACATTAATAAGATCT GGCTCTAACAATCTAGGTGTCATGAAATTCATAATTGTGACTCGTGATTGATTGGGAAGGAACCTGGAAATCAGTTTTCA ATTCCTCGTGTATATCTGTATTATAGAATCAGATCAGGAAGTAGAAGAGGAATAAGATGCAGGGTTTTGCTTTATAAAGA AAACATCTGGTGTAGTTTTTTTGTTTTTCTTAACATTTTCATGGTAATTCTTTTTTATATTAGGTGCTTTGTGATGACCC GGGGGTATAATGGAATTTCGCATGTGTTTTTAATAGTTATCACTTTGTTTCCTTTGATTTCACTAAAATGGACACGTTCC CTGTATGTGTTGTTGTGGTAATATAATCAAACGATGCAGTAGCAAATCATATATGTTTCAGCTTCACATTCTCACCCATA ATTTATCCTTTATGTTCTTTGTACATGATACCTGTTACATATTAGTAGTCTTGGTTGTTTACTTGTTGTTTTCTAAATGC CATTTCCCATGCCGCACGACTGCAGGTGTATGGAGGACTTGGTAAGCACCACAAGATATGTCTCATGGTCTCTACACAAT AAGGTATATATGCTTTGGCACGCTGCATTCTAAATGATCTCAATTTCTAATTTTAGTATAAGCTAAGCTTGTATGATTGG CCACTTAAACTGTAAGAAACTACGAGTAAAATATTATTTACTGAGCTAAGTTTCTCAGACTCCTTTTTTTTATATCCATT TGGTGTCACTGTCAACTTTGTAGAGTCGGTCTGGGTTGCGACAGTTCTTAGATTCATTTGGTGGAACAGAAAATTCCAAT GTTCCCACAACAACAGTTGTATCACAAGCAAATGCACAAGAGAAAGAAGACACAAAGCCGCAACCAGATGTAAAGCTCAG TCATGTGGCCTCTGGGACTGATTCCAGCACATCCACTCAGACAACAGAAACAAAGCTTGCTGACCTTCTGGATAGTACAC TTTGGAATCGGAGGCTTGCACCTTCATCTGAAAGGATTGTTTATGGTTTGGTACAACAGATATTTCACGGCATAAGAGAG TATTTCTTGGTTTCCACAGAGCTAAAGGTTTGTGATGTTTCTTGTTTGTTCATGTATATATCATAATGCCGTTGGTGTGC AAGAGGCGCCATCTGCTTTTACATTGATAATGAAAATTAAAGCCTCACTAAAATTCACATCTATTGTGAAACTGAAATTA TTTAATGACTCTCTATTAAAGCCGCAGTAAAATTCACATCTATAAGTTAGGTTGCCCTAGCTTGAATTCTAATTTTGTAG AGACAATTAGATCCTGTAAAAACATAGTTTTAGTTTTTTTATTTTTTCTTTTGCATTCAAAAAGTCTCCAGTGTATCATT TTCTCAAAGGATGAATAGATGTTCTAAAATCTTCATCTACACTACATGCAAAACATCCTGCAGCACAAGGTTTCGACTTT CGAGTTTAATTACCCTTCTAATGGTTATTGCCTGTTAGGTATTATATACCACACTTACATTTATGTTTCTTTTCATTCTT TCTAATTTTATGGTTGTTTGGGTTGATTACAAGTTACAACCGCAGCACTAGAAGACAACATGTCAGAAAACTGATATTGC ATTAATCTGTGGTTATTATGCTCTGCTTATACCTCATATTTTGCAGTTTAACTGTTTCCTCTTGATGCCCATTGTGGACA AGTTGCCTGCACGCCTTCGAGAAGACCTAGAATCTGCTTTTGAAGATGACCTGGATAATGTTTTCGACATAACCAATCTG CAGCACTCTTTGGGGCAGCAGAAGAGAGACACAGAAATTGAGCTGAAGAGGGTATTTCATTATTCATGGGACATTTTTTT TTTCTATGAACAATTTCTATTGATGGCAAATTTCTGTGCATCATAATGTCCAATTTCTTGATGGTTTTGCAGATCAAGAG GCTCAGAGAGAAATTCAGAATGATACATGAGCAGTTAATTCTACGTCAAGCCATGTGA
CDS sequence (LotjaGi4g1v0032700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCACAAGGAGTTTATTATACTCTGCCTTGAAGATTGCAGTGATTGGAGCAATGCAACTACAAGGCGTGTTGTCAT GCAGATTGATCCTGAGTTGTCGAGGACGGTTGTTGTATCGACTAAGCTGGATACCAGGATACCGCAATTTGCGCGTCCCT CGGATGTTGAAGTGTTCCTCTCTCCGCCTGCGTGTGCGCTTGATGGGTGCATTCTGGGAGACTCTCCCTTCTTCACGTCT GTGCCTTCGGGAAGAGTTGGTTCTGGGAGTGATTCTCTGTACAGGTCCAATGATGAGTTTAAGCAGGCAGTATCCTTGAG AGAGATAGAAGATATTGCTTCTCTGGAGGAGAAATTGGTCAGGCCATTGTCAAAGCAAGAAAGAAGTAGGATAGGTGTGA GCAGACTTAGGTTGTTTCTGGAAGAAATGCTACAGAAGAGGTATATAAATAATGTACCGTTGATCATTCCACTTCTTGAG AAGGAGTATCGGAGTGTGACAAGGAAATTGAGTGATATAAGTCAAGAATTGAGTACACTGGATGAAGCCAAACTGAAGGA GAAAGGAAGAACTTTCCATGATTTGTTCTTGACCAAGTTGTCATTACTTCTGAAAGGGACGGTTGTTGCACCACCTGATA AGTTTGGTGAAACACTACAAGATGAGCGAATAAATGGAGGTGCATTTGTTGGTGCTGATGTTGCTCAGTTCCCTCACAAG CTAATACCTAATGCAGGGATGCGTCTTTATGGTGGTGCACAATATCATCGGGCAATGGCCGAATTCCGTTTTGTCGTTGG AGGAATCAAGTGCCCTCCAATTACTCGGGAAGAAATCGTAAATGCTTGTGGAGTTGAAGACATTCATGATGGAACAAACT ACTCTAGGACTGCCTGTGTAATTGCTGTTGCAAAGGCTCGTGACACATTTGAACCTTTTCTTCATCAGTTGGGATGTAGA TTGTTGCATATACTCAAACGATTGCTTCCAATATCTGTTTTTCTTCTTCAGAAAGATTGTGAATATCTAAGTGGTCATGA GGTGTTCCTCAGGCGTGTTGCCTCTGCCTTCAACAACTTTGCAGAGTCTACTGAAAAATCATGCCGTGAAAAGTGTATGG AGGACTTGGTAAGCACCACAAGATATGTCTCATGGTCTCTACACAATAAGAGTCGGTCTGGGTTGCGACAGTTCTTAGAT TCATTTGGTGGAACAGAAAATTCCAATGTTCCCACAACAACAGTTGTATCACAAGCAAATGCACAAGAGAAAGAAGACAC AAAGCCGCAACCAGATGTAAAGCTCAGTCATGTGGCCTCTGGGACTGATTCCAGCACATCCACTCAGACAACAGAAACAA AGCTTGCTGACCTTCTGGATAGTACACTTTGGAATCGGAGGCTTGCACCTTCATCTGAAAGGATTGTTTATGGTTTGGTA CAACAGATATTTCACGGCATAAGAGAGTATTTCTTGGTTTCCACAGAGCTAAAGTTTAACTGTTTCCTCTTGATGCCCAT TGTGGACAAGTTGCCTGCACGCCTTCGAGAAGACCTAGAATCTGCTTTTGAAGATGACCTGGATAATGTTTTCGACATAA CCAATCTGCAGCACTCTTTGGGGCAGCAGAAGAGAGACACAGAAATTGAGCTGAAGAGGATCAAGAGGCTCAGAGAGAAA TTCAGAATGATACATGAGCAGTTAATTCTACGTCAAGCCATGTGA
Protein sequence (LotjaGi4g1v0032700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQHKEFIILCLEDCSDWSNATTRRVVMQIDPELSRTVVVSTKLDTRIPQFARPSDVEVFLSPPACALDGCILGDSPFFTS VPSGRVGSGSDSLYRSNDEFKQAVSLREIEDIASLEEKLVRPLSKQERSRIGVSRLRLFLEEMLQKRYINNVPLIIPLLE KEYRSVTRKLSDISQELSTLDEAKLKEKGRTFHDLFLTKLSLLLKGTVVAPPDKFGETLQDERINGGAFVGADVAQFPHK LIPNAGMRLYGGAQYHRAMAEFRFVVGGIKCPPITREEIVNACGVEDIHDGTNYSRTACVIAVAKARDTFEPFLHQLGCR LLHILKRLLPISVFLLQKDCEYLSGHEVFLRRVASAFNNFAESTEKSCREKCMEDLVSTTRYVSWSLHNKSRSGLRQFLD SFGGTENSNVPTTTVVSQANAQEKEDTKPQPDVKLSHVASGTDSSTSTQTTETKLADLLDSTLWNRRLAPSSERIVYGLV QQIFHGIREYFLVSTELKFNCFLLMPIVDKLPARLREDLESAFEDDLDNVFDITNLQHSLGQQKRDTEIELKRIKRLREK FRMIHEQLILRQAM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 568 | 568 | 4.3E-229 | – | |
| Gene3D | 1 | 203 | 203 | 2.6E-17 | – | |
| PANTHER | 1 | 568 | 568 | 4.3E-229 | ||
| ProSiteProfiles | 1 | 153 | 153 | 26.742 | ||
| SUPERFAMILY | 6 | 161 | 156 | 8.76E-6 | ||
| MobiDBLite | 417 | 451 | 35 | - | – | |
| MobiDBLite | 437 | 451 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0032700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…