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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR11566
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We have found 79 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.281s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0047099.1
n.a. Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136234|pdb|3T34|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136235|pdb|3T35|A Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136236|pdb|3T35|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136237|pdb|3T35|C Chain C, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission St chr0 15713457 15714079 +
2 domain predictions
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Lj0g3v0047109.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502159737|ref|XP_004511514.1| chr0 15714091 15715072 +
2 domain predictions
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Lj0g3v0047119.1
n.a. Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136234|pdb|3T34|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136235|pdb|3T35|A Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136236|pdb|3T35|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136237|pdb|3T35|C Chain C, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission St chr0 15714718 15715127 +
2 domain predictions
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Lj0g3v0047129.1
n.a. n.a. chr0 15714718 15715127 +
2 domain predictions
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Lj0g3v0047139.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502159737|ref|XP_004511514.1| chr0 15715074 15718495 +
2 domain predictions
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Lj0g3v0047149.1
n.a. PREDICTED: dynamin-related protein 5A-like isoform 2 [Glycine max] gi|356497327|ref|XP_003517512.1| chr0 15718490 15719594 +
2 domain predictions
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Lj0g3v0106329.1
n.a. Interferon-induced GTP-binding protein Mx [Medicago truncatula] gi|357519157|ref|XP_003629867.1| chr0 45712952 45715310 +
2 domain predictions
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Lj0g3v0117369.1
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502152578|ref|XP_004508991.1| chr0 51754221 51756258 -
2 domain predictions
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Lj0g3v0169099.1
n.a. DYNAMIN-like 1E isoform 3 [Theobroma cacao] gi|508776842|gb|EOY24098.1| chr0 80793839 80799235 -
2 domain predictions
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Lj0g3v0169099.2
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502152578|ref|XP_004508991.1| chr0 80794860 80796180 -
2 domain predictions
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Lj0g3v0199559.2
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356522123|ref|XP_003529699.1| chr0 97966111 97995708 -
2 domain predictions
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Lj0g3v0248499.1
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356563206|ref|XP_003549855.1| chr0 128811250 128812577 +
2 domain predictions
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Lj0g3v0278019.1
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502152578|ref|XP_004508991.1| chr0 144382298 144383320 -
2 domain predictions
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Lj0g3v0326849.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502155333|ref|XP_004510036.1| chr0 170850569 170857043 -
2 domain predictions
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Lj0g3v0330799.1
n.a. Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136234|pdb|3T34|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a (Atdrp1a) In Prefission Stategi|390136235|pdb|3T35|A Chain A, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136236|pdb|3T35|B Chain B, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission Stategi|390136237|pdb|3T35|C Chain C, Arabidopsis Thaliana Dynamin-Related Protein 1a In Postfission St chr0 172887667 172889832 -
2 domain predictions
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Lj1g3v3608410.1
n.a. PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max] gi|356527252|ref|XP_003532226.1| chr1 41564436 41570974 +
2 domain predictions
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Lj3g3v0429690.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502155333|ref|XP_004510036.1| chr3 4436833 4443347 -
2 domain predictions
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Lj3g3v0462040.1
n.a. dynamin homolog [Astragalus sinicus] gi|6625788|gb|AAF19398.1|AF203882_1 chr3 5059703 5071377 -
2 domain predictions
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Lj3g3v0462310.1
n.a. dynamin homolog [Astragalus sinicus] gi|6625788|gb|AAF19398.1|AF203882_1 chr3 5186739 5195972 -
2 domain predictions
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Lj3g3v0618160.1
n.a. PREDICTED: dynamin-related protein 1E-like isoform 1 [Glycine max] gi|356520720|ref|XP_003529008.1| chr3 6741577 6748757 -
2 domain predictions
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Lj3g3v0618160.2
n.a. PREDICTED: dynamin-related protein 1E-like [Cicer arietinum] gi|502155644|ref|XP_004510142.1| chr3 6741577 6749466 -
2 domain predictions
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Lj3g3v2442000.1
n.a. PREDICTED: dynamin-related protein 12A-like isoform X1 [Cicer arietinum] gi|502156855|ref|XP_004510671.1| chr3 30169571 30175426 -
2 domain predictions
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Lj3g3v2442010.1
n.a. PREDICTED: dynamin-related protein 12A-like isoform X2 [Cicer arietinum] gi|502156858|ref|XP_004510672.1| chr3 30176307 30176904 -
2 domain predictions
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Lj4g3v0000080.1
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356563206|ref|XP_003549855.1| chr4 61734 98073 +
2 domain predictions
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Lj4g3v0336850.1
n.a. PREDICTED: dynamin-like protein ARC5-like [Glycine max] gi|356524868|ref|XP_003531050.1| chr4 4192113 4197428 -
2 domain predictions
 –
Lj4g3v0336850.2
n.a. PREDICTED: dynamin-like protein ARC5-like [Glycine max] gi|356524868|ref|XP_003531050.1| chr4 4192113 4200088 -
2 domain predictions
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Lj4g3v0336850.3
n.a. PREDICTED: dynamin-like protein ARC5-like [Glycine max] gi|356524868|ref|XP_003531050.1| chr4 4192113 4200088 -
2 domain predictions
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Lj4g3v0386160.1
n.a. PREDICTED: dynamin-related protein 3A-like [Glycine max] gi|356528007|ref|XP_003532597.1| chr4 5033027 5038251 +
2 domain predictions
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Lj4g3v0386160.2
n.a. PREDICTED: dynamin-related protein 3A-like [Glycine max] gi|356519473|ref|XP_003528397.1| chr4 5033645 5041332 +
2 domain predictions
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Lj4g3v2618580.1
n.a. n.a. chr4 35658036 35668515 +
2 domain predictions
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Lj4g3v2618590.1
n.a. PREDICTED: dynamin-related protein 4C-like [Cicer arietinum] gi|502140569|ref|XP_004504261.1| chr4 35658036 35661146 -
2 domain predictions
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Lj4g3v2618610.1
n.a. PREDICTED: dynamin-related protein 4C-like [Cicer arietinum] gi|502140569|ref|XP_004504261.1| chr4 35668626 35669270 -
2 domain predictions
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Lj4g3v3004140.1
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502139021|ref|XP_004503616.1| chr4 39882253 39887648 +
2 domain predictions
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Lj4g3v3004140.2
n.a. PREDICTED: dynamin-related protein 5A-like [Cicer arietinum] gi|502139021|ref|XP_004503616.1| chr4 39883930 39887648 +
2 domain predictions
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Lj4g3v3113200.1
n.a. PREDICTED: dynamin-related protein 1C-like isoform X1 [Cicer arietinum] gi|502138270|ref|XP_004503345.1| chr4 41611357 41618187 +
2 domain predictions
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Lj4g3v3113200.2
n.a. PREDICTED: dynamin-related protein 1C-like isoform X1 [Cicer arietinum] gi|502138270|ref|XP_004503345.1| chr4 41616063 41618187 +
2 domain predictions
 –
Lj6g3v2192350.1
n.a. PREDICTED: dynamin-related protein 3A-like [Glycine max] gi|356554800|ref|XP_003545730.1| chr6 25332397 25341215 -
2 domain predictions
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LotjaGi1g1v0191600_LC.1
n.a. Dynamin 4C-like protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|G7L7C0|G7L7C0_MEDTR Dynamin 4C-like protein; Found in the gene: LotjaGi1g1v0191600_LC LjG1.1_chr1 37860414 37861867 -
2 domain predictions
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LotjaGi1g1v0191800.1
n.a. Dynamin family protein; TAIR: AT1G60500.1 Dynamin related protein 4C; Swiss-Prot: sp|Q9ZP55|DRP4C_ARATH Dynamin-related protein 4C; TrEMBL-Plants: tr|G7L7C0|G7L7C0_MEDTR Dynamin 4C-like protein; Found in the gene: LotjaGi1g1v0191800 LjG1.1_chr1 37920870 37923351 -
2 domain predictions
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LotjaGi1g1v0597700.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 LjG1.1_chr1 113727320 113734554 +
2 domain predictions
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LotjaGi1g1v0597700.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 LjG1.1_chr1 113727562 113733750 +
2 domain predictions
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LotjaGi1g1v0719900_LC.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0719900_LC LjG1.1_chr1 129020035 129026467 +
2 domain predictions
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LotjaGi1g1v0720000_LC.1
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0720000_LC LjG1.1_chr1 129033783 129036725 +
2 domain predictions
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LotjaGi1g1v0720000_LC.2
n.a. Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0720000_LC LjG1.1_chr1 129033786 129036730 +
2 domain predictions
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LotjaGi1g1v0720100_LC.1
n.a. Dynamin, putative; TAIR: AT5G42080.2 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|I3SR93|I3SR93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0720100_LC LjG1.1_chr1 129050102 129053045 +
2 domain predictions
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LotjaGi2g1v0442100.1
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807665 93814071 +
2 domain predictions
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LotjaGi2g1v0442100.2
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0B2QVL7|A0A0B2QVL7_GLYSO Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
2 domain predictions
 –
LotjaGi2g1v0442100.3
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0L9TH92|A0A0L9TH92_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
2 domain predictions
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LotjaGi2g1v0442100.4
n.a. Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 LjG1.1_chr2 93807910 93813475 +
2 domain predictions
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LotjaGi3g1v0047100.1
n.a. Dynamin family protein; TAIR: AT1G53140.1 Dynamin related protein 5A; Swiss-Prot: sp|F4HPR5|DRP5A_ARATH Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A072U158|A0A072U158_MEDTR Dynamin 5A-like protein; Found in the gene: LotjaGi3g1v0047100 LjG1.1_chr3 5016547 5022969 -
2 domain predictions
 –