Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0034900 |
| Transcript ID | LotjaGi4g1v0034900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquinol oxidase; TAIR: AT5G64210.1 alternative oxidase 2; Swiss-Prot: sp|Q41266|AOX2_SOYBN Ubiquinol oxidase 2, mitochondrial; TrEMBL-Plants: tr|S5FDW5|S5FDW5_MEDSA Ubiquinol oxidase; Found in the gene: LotjaGi4g1v0034900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4241588..4245015) extracted from Lotus japonicus Gifu genome v1.2.
CCCATTTCTTATCCAAAAACTGCGCGCGTTATTGCACGTAAAGCCGTCGATGACATTGCCAAAGCAACTCAATCAACGGC CACAATCGTTCCTAACAATCCCACACGAGATAAGCATGGACCGTACATTTCAAAAAAGAAGCATGGACCATAACTGTAAC TTCCCCACTGGCGCCACGCCACACCACGCTTCACCTTCAACTACCCTAACAATAATTCCACAATTCTCCAGAACGAACTC ATCAGTTCTTAACGAACACAGATGAAGCACTTGGCGTTGAGTTACGCGCTTCGCCGAGCACTCAACTGTAACCGCCACGG GTTGACGGCGGTGAGGCAGTTACCGGCGACGGAAGTGAGGCGTTTTCTTGTAAGCGGCGAGAATGGAGTGTTTTCGTGCT GGAACAGGATGATGTCTTCTCAGGCGGCGCCGGAGGAGGAGAAGAAAGAGGAGAAGGCGGAGAAGGAGAGTTTGCGAACA GAGGCTAAGAAGAACGACGGTAGCGTGGTGGTGTCGAGCTATTGGGGGATTTCGAGGCCGAAGATTACCAGAGAGGACGG CACAGAGTGGCCTTGGAACTGCTTCATGGTGAGGATTTTGATTACATGAAAGTTCAATTGAATTTCCTTGCATTTTTTCC GTCTGTGGATTTTGATGCAGAGGAGGTGTTTGTTGATTGTTCATTGTTGTTGTTTTTCTTCTAATGCTACTCGCTATCGT GATTTCTTTGGTGTATGTAGCCGTGGGAGACTTATCGTCCAGACTTGTCCATAGATCTGACGAAGCATCATGTGCCGAAG AATTTTCTGGATAAAGTTGCTTACAGGACAGTGAAGCTCCTCAGAATTCCAACAGATGTGTTTTTTCAGGTGTGTGTTTT GAAATCTGTATTTGTTCTTTCTTCATATTCAGGGATGCTAGAATTATATGTTCGCAAGTCGTGTTGTCCCCAATGGTTAG CTCAGGTGGTAAGAGTTAGATGGCATAACTCATAAGGGTTGGGTGGGATGAAGGGTGAAGGGTCCAGGGTTCGAACTCTG AGGAGGGACTAATTTACTAACAACTAAAATTTGTCTGTCACAAAAAAAATGTTTGGTTTGTTTAGTTTAGAATTAGCTAA CTCACACTTGATTTTTTATTGTAAAATATGTGTATCATTTGTAGTTTTGTACCCCAATAGGAAGTTTCTAATTTTAGTAA GAGTATAGTGATGTGTTCATTTTCCACTTATTCATGGAAATATGCACAATGAATAATGTATTTGTTTTCAAAAAATGTAG ACTAGATACTGCAGCTCCATTATTCAATTTTTTCAAGATATTGTTTATGGAAATTGAATTAATTTTCGTTCAATCATCGC ACCATAATGCATACATATTTTCAGAGACGGTATGGTTGCCGAGCGATGATGCTTGAAACAGTTGCAGCTGTACCTGGAAT GGTAGGAGGGATGTTGCTGCACTTAAGGTCACTGCGTAAGTTTCAGCAGAGTGGCGGATGGATCAAGGCGTTGCTTGAGG AAGCAGAGAATGAGAGAATGCACCTAATGACCATGGTGGAACTTGTGCAGCCTAAATGGTATGAAAGATTTCTGGTTCTT ACTGTGCAGGGAGTTTTCTTCAATGCGTTCTTTGTGCTTTATTTACTCTCTCCAAAGGTGGCTCATAGAGTTGTTGGGTA CCTTGAGGAGGAAGCTATACATTCTTACACTGAGTATTTGAAGGACATTGAGAGTGGTGCAATTGAAAATGTTCCTGCTC CTGCCATTGCAATAGACTATTGGAGACTTCCCAAGGATGCTACATTGAAAGATGTTATAACAGTCATTCGTGCTGATGAG GCTCACCATCGGGACGTGAACCATTTTGCTTCTGTGAGTATCATTTTTCACTAGACTAATCATCTTTGTGTTTGCCTTAT AAAATGATGCTTCTAATTCAGTTCCATCAACTTATCCCTTGAAATTGTTTAAAGGGTAAAGTATGTTTTTAGTCCCGTAA ATTCGTTAATGTTTGGTTCAAGTCTTTGATTTGGTTCCTTATTTATTGAAATGTTCTCATTTTAGTCCTCAATGTGTGCT CTGTTATTTATTTTTTGGGGTTTTAATGCAAATTGGTATGTGTTGAAAAAACTGTAATGGCCTAGTGCGGTCCCAAAAAT GTTATTTGTTATTGATACCTCGTTTTATTATAGTTAGGTTCACTATTTTGTTCATAATGTGTGATAAAGAGAGGCTCTTT TAGAAAATATGGATCAAAATGAGACATTTTATAAATTAGAGACTACCTTCAAATATTGACTGTTTTATAGGGGACTAAAC ATTTGTTACCCTTGTTTATATGATATATTAGTTTTATGCTCCTTTTTTTTTTTGATAATGTGAGGGGCGAAAGCCCAGTT TTATGCTCCTTTCATTTCAACGTCCTCTGAAACTTGTATACATGTACGGATCATTTTTTTCTTGGAACATAAAGCATGAA AGTTATACATTGTGGGAAATATGGGGTTGGTTTAATATACACAAAGGATGAATCTGACAGACAACTAGATGGCCATTCTT CCCCCAATTTCCTCATAAGCCCAGCTTAGAATGTTAAAGTGAAGGGTGTACAAGGGCTGCAGAAGTATAAGACTACTAGA GTACTTACATTTGTTGTCAAACATAGTAAATAGGTTGGCAGAAATCAACAACACATTTAATTGTTCACTTCAAACATAAA TTGATGATTACAGATATTCAAATGGAGTTTAGCCATTTCATTTCTTTTGGGCGGGGGGCATAAGAGTCAGAGAATTATAA ATCTTAACCATGTAGGCAGACAGTAACATACTACGCGTATGATGCATTTTGCAATACTGATTTGTTCTTTTGGACAAGTT TATTGATTTACTGTGTTTACTATATTTGTACATTGATTTTGCAGTGGTGTGCCCTTGTTTTTTAATACCATTATTATGTT TGCAGGATATCCACTTCCATGGTAAAGAACTGCGGGAGGCACCAGCTCCTCTTGGTTATCATTAGGTCTTTACTGTCATG GATATAAAACTACCCATTCAGTTTGCATTTAGAAACCTATAAGTGCCAATGTATTGACTTTTGATTGATACAGAATTCCT GCCCTTAAATAATACGTCTGGACTGTTACATCCCACTAAAGACCTATTAGCTTATTTTATAATTCAGTAATATATCTATG TAAATGTGTGTGTGAATGAATATATGAAATATAATAGGATATATATATATATATATACTCCCCGTCCTCTAGGAACTCCC GAATTTCTTTAGAAATGTGATGATACTCTCAATGGTTAGTCAAACAAACAGAGTTAAATTCCAACGACGTGTCCTCCACA TAAGAGGTTGAGATCACCAAAATCATGGGTCTTTGTAGCTTCTCCTAACAGCAATAGCTTTATGGAAC
CDS sequence (LotjaGi4g1v0034900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCACTTGGCGTTGAGTTACGCGCTTCGCCGAGCACTCAACTGTAACCGCCACGGGTTGACGGCGGTGAGGCAGTT ACCGGCGACGGAAGTGAGGCGTTTTCTTGTAAGCGGCGAGAATGGAGTGTTTTCGTGCTGGAACAGGATGATGTCTTCTC AGGCGGCGCCGGAGGAGGAGAAGAAAGAGGAGAAGGCGGAGAAGGAGAGTTTGCGAACAGAGGCTAAGAAGAACGACGGT AGCGTGGTGGTGTCGAGCTATTGGGGGATTTCGAGGCCGAAGATTACCAGAGAGGACGGCACAGAGTGGCCTTGGAACTG CTTCATGCCGTGGGAGACTTATCGTCCAGACTTGTCCATAGATCTGACGAAGCATCATGTGCCGAAGAATTTTCTGGATA AAGTTGCTTACAGGACAGTGAAGCTCCTCAGAATTCCAACAGATGTGTTTTTTCAGAGACGGTATGGTTGCCGAGCGATG ATGCTTGAAACAGTTGCAGCTGTACCTGGAATGGTAGGAGGGATGTTGCTGCACTTAAGGTCACTGCGTAAGTTTCAGCA GAGTGGCGGATGGATCAAGGCGTTGCTTGAGGAAGCAGAGAATGAGAGAATGCACCTAATGACCATGGTGGAACTTGTGC AGCCTAAATGGTATGAAAGATTTCTGGTTCTTACTGTGCAGGGAGTTTTCTTCAATGCGTTCTTTGTGCTTTATTTACTC TCTCCAAAGGTGGCTCATAGAGTTGTTGGGTACCTTGAGGAGGAAGCTATACATTCTTACACTGAGTATTTGAAGGACAT TGAGAGTGGTGCAATTGAAAATGTTCCTGCTCCTGCCATTGCAATAGACTATTGGAGACTTCCCAAGGATGCTACATTGA AAGATGTTATAACAGTCATTCGTGCTGATGAGGCTCACCATCGGGACGTGAACCATTTTGCTTCTGATATCCACTTCCAT GGTAAAGAACTGCGGGAGGCACCAGCTCCTCTTGGTTATCATTAG
Protein sequence (LotjaGi4g1v0034900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKHLALSYALRRALNCNRHGLTAVRQLPATEVRRFLVSGENGVFSCWNRMMSSQAAPEEEKKEEKAEKESLRTEAKKNDG SVVVSSYWGISRPKITREDGTEWPWNCFMPWETYRPDLSIDLTKHHVPKNFLDKVAYRTVKLLRIPTDVFFQRRYGCRAM MLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVQPKWYERFLVLTVQGVFFNAFFVLYLL SPKVAHRVVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASDIHFH GKELREAPAPLGYH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 159 | 159 | - | – | |
| PIRSF | 3 | 329 | 327 | 2.1E-107 | ||
| PANTHER | 36 | 334 | 299 | 5.4E-192 | ||
| PANTHER | 36 | 334 | 299 | 5.4E-192 | – | |
| MobiDBLite | 55 | 77 | 23 | - | – | |
| MobiDBLite | 55 | 76 | 22 | - | – | |
| Coils | 58 | 78 | 21 | - | – | |
| Gene3D | 108 | 331 | 224 | 1.0E-95 | ||
| Pfam | 123 | 314 | 192 | 4.6E-81 | ||
| CDD | 151 | 318 | 168 | 4.86901E-102 | ||
| Phobius | 160 | 179 | 20 | - | – | |
| Phobius | 180 | 220 | 41 | - | – | |
| Phobius | 221 | 240 | 20 | - | – | |
| Phobius | 241 | 334 | 94 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Alternative oxidase activity | Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0034900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…